Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.330 GeneticVariation disease BEFREE They also bind to the typhoid-resistant human leukocyte antigen (HLA) alleles DRB1*0401. 30547672 2019
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.330 Biomarker disease CTD_human Imputation-based fine-mapping across the extended MHC region showed that the classical HLA-DRB1*04:05 allele (OR = 0.14, P = 2.60 × 10(-11)) could entirely explain the association at rs7765379, thus implicating HLA-DRB1 as a major contributor to resistance against enteric fever, presumably through antigen presentation. 25383971 2014
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.330 GeneticVariation disease BEFREE Imputation-based fine-mapping across the extended MHC region showed that the classical HLA-DRB1*04:05 allele (OR = 0.14, P = 2.60 × 10(-11)) could entirely explain the association at rs7765379, thus implicating HLA-DRB1 as a major contributor to resistance against enteric fever, presumably through antigen presentation. 25383971 2014
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.330 GeneticVariation disease BEFREE Haplotypes that were either protective (TNFA*1 [-308].DRB1*04) or predisposed individuals to typhoid fever (TNFA*2 [-308].DRB1*0301) were determined. 11120931 2001
Entrez Id: 7099
Gene Symbol: TLR4
TLR4
0.030 GeneticVariation disease BEFREE TLR4 896 A>G increased risk for all parasitic infections (ORG 1.59; 95%CI 1.05-2.42), malaria (1.31; 95%CI 1.04-1.66), brucellosis (2.66; 95%CI 1.66-4.27), cutaneous leishmaniasis (7.22; 95%CI 1.91-27.29), neurocysticercosis (4.39; 95%CI 2.53-7.61), Streptococcus pyogenes tonsillar disease (2.93; 95%CI 1.24-6.93) , typhoid fever (2.51; 95%CI 1.18-5.34) and adult urinary tract infections (1.98; 95%CI 1.04-3.98), but was protective for leprosy (0.36; 95%CI 0.22-0.60). 24282567 2013
Entrez Id: 7099
Gene Symbol: TLR4
TLR4
0.030 GeneticVariation disease BEFREE This study, for the first time, reports the prevalence of TLR4 gene polymorphisms in the Malay population and suggests that these polymorphisms confer a higher risk for typhoid, infection. 21612766 2011
Entrez Id: 7099
Gene Symbol: TLR4
TLR4
0.030 Biomarker disease BEFREE Here we determined the extent of genetic variation within TLR4 in a Vietnamese population and suggest that TLR4 may be involved in defense against typhoid fever in this population. 19277200 2009
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.030 GeneticVariation disease LHGDN A TNF region haplotype offers protection from typhoid fever in Vietnamese patients. 17503085 2007
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.030 GeneticVariation disease BEFREE A TNF region haplotype offers protection from typhoid fever in Vietnamese patients. 17503085 2007
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.030 Biomarker disease BEFREE Tumor necrosis factor (TNF)-alpha release by LPS-stimulated blood was found to be lower during acute typhoid fever than after a course of antimicrobial therapy (P<or=.001). 12134261 2002
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.030 GeneticVariation disease BEFREE Haplotypes that were either protective (TNFA*1 [-308].DRB1*04) or predisposed individuals to typhoid fever (TNFA*2 [-308].DRB1*0301) were determined. 11120931 2001
Entrez Id: 129831
Gene Symbol: RBM45
RBM45
0.020 GeneticVariation disease BEFREE They also bind to the typhoid-resistant human leukocyte antigen (HLA) alleles DRB1*0401. 30547672 2019
Entrez Id: 1401
Gene Symbol: CRP
CRP
0.020 Biomarker disease BEFREE Presenting symptoms were identical for both serovars but higher median leukocyte counts (6.8 x 109/L vs. 6.3 x 109/L; p = 0.035) and C-reactive protein (CRP) values (47.0 mg/L vs. 36 mg/L; p = 0.034) were observed for Salmonella Typhi infections. 28931025 2017
Entrez Id: 1080
Gene Symbol: CFTR
CFTR
0.020 GeneticVariation disease BEFREE To determine which functional variation in CFTR is associated with susceptibility to enteric fever, we sequenced all 27 exons of the CFTR gene in 25 individuals from Indonesia. 20233062 2010
Entrez Id: 1401
Gene Symbol: CRP
CRP
0.020 Biomarker disease BEFREE The polymorphisms at TNFA - 238 or in IFNG, IL1A, IL1B, IL12B, TNFRSF1A, IFNGR1, CASP1, and CRP were also not associated with typhoid or paratyphoid fever. 17477815 2007
Entrez Id: 1080
Gene Symbol: CFTR
CFTR
0.020 GeneticVariation disease BEFREE We found an association between genotypes in CFTR and susceptibility to typhoid fever (OR=2.6). 16078047 2005
Entrez Id: 129831
Gene Symbol: RBM45
RBM45
0.020 GeneticVariation disease BEFREE Haplotypes that were either protective (TNFA*1 [-308].DRB1*04) or predisposed individuals to typhoid fever (TNFA*2 [-308].DRB1*0301) were determined. 11120931 2001
Entrez Id: 4041
Gene Symbol: LRP5
LRP5
0.010 Biomarker disease BEFREE Rabbits immunized with the trivalent typhoid-iNTS glycoconjugate vaccine generated high titers of serum IgG antibody to all three polysaccharide antigens for which anti-COPS IgG antibodies were directed primarily against serogroup-specific OPS epitopes. 30018230 2018
Entrez Id: 952
Gene Symbol: CD38
CD38
0.010 AlteredExpression disease BEFREE Interestingly, MAIT cells from low-dose TD volunteers had higher levels of CD38 coexpressing CCR9, CCR6, and Ki67 during the development of typhoid fever than high-dose TD volunteers. 28428786 2017
Entrez Id: 1235
Gene Symbol: CCR6
CCR6
0.010 Biomarker disease BEFREE Interestingly, MAIT cells from low-dose TD volunteers had higher levels of CD38 coexpressing CCR9, CCR6, and Ki67 during the development of typhoid fever than high-dose TD volunteers. 28428786 2017
Entrez Id: 55697
Gene Symbol: VAC14
VAC14
0.010 Biomarker disease BEFREE Thus, coupling multiple genetic association studies with mechanistic dissection revealed how VAC14 regulates <i>Salmonella</i> invasion and typhoid fever susceptibility and may open doors to new prophylactic/therapeutic approaches. 28827342 2017
Entrez Id: 10803
Gene Symbol: CCR9
CCR9
0.010 AlteredExpression disease BEFREE Interestingly, MAIT cells from low-dose TD volunteers had higher levels of CD38 coexpressing CCR9, CCR6, and Ki67 during the development of typhoid fever than high-dose TD volunteers. 28428786 2017
Entrez Id: 4050
Gene Symbol: LTB
LTB
0.010 Biomarker disease BEFREE Typhi ghost was developed and its capacity as a vaccine candidate against typhoid fever was assessed.<b>Methodology.</b> An <i>asd</i><sup>+</sup> plasmid pJHL187 harbouring a ghost cassette comprising the PhiX 174 <i>E</i>lysis gene tightly controlled under the convergent promotor system was transformed into an <i>asd</i> gene-deleted mutant <i>S.</i>Typhi strain (STG).The <i>eltB</i> gene encoding the <i>E. coli</i> heat-labile enterotoxin (LTB) protein was subcloned into a foreign antigen delivery cassette of pJHL187 to increase mucosal immunity.<b>Results.</b> The stringent repression and expression of the lethal <i>E</i> lysis gene in the system allowed stable production of the ghost strain and secretion of LTB, which was confirmed by immune blot analysis. 28792376 2017
Entrez Id: 4615
Gene Symbol: MYD88
MYD88
0.010 AlteredExpression disease BEFREE MyD88-dependent pro-inflammatory activity in Vi polysaccharide vaccine against typhoid promotes Ab switching to IgG. 26303218 2015
Entrez Id: 8099
Gene Symbol: CDK2AP1
CDK2AP1
0.010 GeneticVariation disease BEFREE Analysis of the ST313 isolates has identified genome degradation, compared with the ST19 genotype that typically causes diarrhea in humans, especially in industrialized countries, adapting a more host-restricted lifestyle typical of Salmonella Typhi infections. 26449947 2015