Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5950
Gene Symbol: RBP4
RBP4
0.320 GeneticVariation disease BEFREE Bi-allelic mutations in RBP4 were identified (c.248+1G>A), consistent with a diagnosis of inherited vitamin A deficiency. 27892788 2017
Entrez Id: 5950
Gene Symbol: RBP4
RBP4
0.320 Biomarker disease BEFREE Ret heterozygosity increases the incidence and severity of distal bowel aganglionosis induced by vitamin A deficiency in Rbp4(-/-) animals. 20110328 2010
Entrez Id: 5950
Gene Symbol: RBP4
RBP4
0.320 Biomarker disease CTD_human Biochemical basis for retinol deficiency induced by the I41N and G75D mutations in human plasma retinol-binding protein. 16157297 2005
Entrez Id: 142
Gene Symbol: PARP1
PARP1
0.300 Biomarker disease CTD_human Vitamin A depletion causes oxidative stress, mitochondrial dysfunction, and PARP-1-dependent energy deprivation. 18676402 2008
Entrez Id: 9227
Gene Symbol: LRAT
LRAT
0.300 Biomarker disease CTD_human We produced an LRAT gene knock-out mouse strain and assessed whether LRAT-/- mice were more susceptible to vitamin A deficiency than wild type (WT) mice. 16174770 2005
Entrez Id: 7051
Gene Symbol: TGM1
TGM1
0.300 Biomarker disease CTD_human Expression of keratinocyte transglutaminase in cornea of vitamin A-deficient rats. 16146918 2005
Entrez Id: 652
Gene Symbol: BMP4
BMP4
0.300 Biomarker disease CTD_human Vitamin A regulation of BMP4 expression in the male germ line. 16120438 2005
Entrez Id: 1592
Gene Symbol: CYP26A1
CYP26A1
0.220 Biomarker disease RGD Vitamin A status affects obesity development and hepatic expression of key genes for fuel metabolism in Zucker fatty rats. 22554462 2012
Entrez Id: 1592
Gene Symbol: CYP26A1
CYP26A1
0.220 AlteredExpression disease BEFREE Our observation suggests an involvement of enhanced CYP26A1 expression causing a functional VAD state in skin that can potentially lead to neoplastic transformation of keratinocytes in an early phase during skin carcinogenesis. 22179182 2011
Entrez Id: 1592
Gene Symbol: CYP26A1
CYP26A1
0.220 AlteredExpression disease BEFREE Vitamin A deficiency is associated with carcinogenesis, and upregulation of CYP26A1, a major retinoic acid (RA)-catabolizing enzyme, has recently been shown in cancer. 18059332 2008
Entrez Id: 57817
Gene Symbol: HAMP
HAMP
0.210 AlteredExpression disease BEFREE Liver hepcidin and ferritin mRNA levels were upregulated by VAD; however, this condition did not promote any change on the expression of those genes that participate in the iron absorption. 22528770 2012
Entrez Id: 57817
Gene Symbol: HAMP
HAMP
0.210 Biomarker disease RGD Vitamin A deficiency increased liver hepcidin mRNA and iron spleen concentrations; however, iron deficiency in vitamin A-deficient rats deeply inhibits liver hepcidin mRNA expression and significantly increases divalent metal transporter-1 mRNA levels. 19217259 2009
Entrez Id: 7412
Gene Symbol: VCAM1
VCAM1
0.200 Biomarker disease RGD Implication of vitamin A deficiency on vascular injury related to inflammation and oxidative stress. Effects on the ultrastructure of rat aorta. 21512820 2012
Entrez Id: 3658
Gene Symbol: IREB2
IREB2
0.200 Biomarker disease RGD The IRP2 mRNA level of the rats in the test groups was approximately two times that of the control group, whereas the Fn mRNA level and the TfR mRNA level were downregulated and upregulated, respectively, by the vitamin A deficiency. 22154532 2012
Entrez Id: 8694
Gene Symbol: DGAT1
DGAT1
0.200 Biomarker disease RGD Alterations in the lipid metabolism of rat aorta: effects of vitamin a deficiency. 17047345 2006
Entrez Id: 1401
Gene Symbol: CRP
CRP
0.040 Biomarker disease BEFREE We report sensitivities of 88%, 100%, and 80% and specificities of 97%, 100%, and 97% for iron deficiency (ferritin <15 ng/mL or 32 pmol/L), vitamin A deficiency (retinol-binding protein <14.7 μg/mL or 0.70 μmol/L) and inflammation status (C-reactive protein >3.0 μg/mL or 120 nmol/L), respectively. 29203653 2017
Entrez Id: 1401
Gene Symbol: CRP
CRP
0.040 Biomarker disease BEFREE We compared five approaches to adjust RBP for inflammation and estimate VAD prevalence (defined as RBP < 0.7 µmol/L): (1) ignoring inflammation; (2) excluding individuals with inflammation (C-reactive protein (CRP) >5 mg/L or alpha1-acid glycoprotein (AGP) >1 g/)L; (3) multiplying each individual's RBP by an internal correction factor; (4) by an external correction factor; and (5) using regression (corrected RBP = exp(InRBP - β<sub>1</sub> (lnCRP<sub>obs</sub> -lnCRP<sub>ref</sub> ) - β<sub>2</sub> (lnAGP<sub>obs</sub> -lnAGP<sub>ref</sub> )). 26842430 2017
Entrez Id: 1401
Gene Symbol: CRP
CRP
0.040 Biomarker disease BEFREE There was no added effect of adjusting for malaria on the estimated VAD after adjusting for CRP and AGP.<b>Conclusions:</b> The use of regression correction (derived from internal data), which accounts for the severity of inflammation, to estimate the prevalence of VAD in PSC in regions with inflammation and malaria is supported by the analysis of the BRINDA data. 28615251 2017
Entrez Id: 1401
Gene Symbol: CRP
CRP
0.040 Biomarker disease BEFREE After excluding children with malaria parasitaemia, inflammation (CRP > 5 mg L(-1) ), iron deficiency (ferritin < 12 μg L(-1) ) or vitamin A deficiency (RBP < 0.7 μg L(-1) ), the prevalence of anaemia among those without α(+) -thalassaemia (43.0%) remained significantly lower than that among children who were either heterozygotes (53.5%) or homozygotes (67.7%, P = 0.03). 22973867 2014
Entrez Id: 5294
Gene Symbol: PIK3CG
PIK3CG
0.020 AlteredExpression disease BEFREE Taken together, our findings indicate that SULT1C2A enhanced Foxo4 expression by negatively modulating rno-miR-466c-5p expression via the PI3K-ATK signalling pathway in the rat model of VAD-CS. 31044535 2019
Entrez Id: 5293
Gene Symbol: PIK3CD
PIK3CD
0.020 AlteredExpression disease BEFREE Taken together, our findings indicate that SULT1C2A enhanced Foxo4 expression by negatively modulating rno-miR-466c-5p expression via the PI3K-ATK signalling pathway in the rat model of VAD-CS. 31044535 2019
Entrez Id: 5290
Gene Symbol: PIK3CA
PIK3CA
0.020 AlteredExpression disease BEFREE Taken together, our findings indicate that SULT1C2A enhanced Foxo4 expression by negatively modulating rno-miR-466c-5p expression via the PI3K-ATK signalling pathway in the rat model of VAD-CS. 31044535 2019
Entrez Id: 5291
Gene Symbol: PIK3CB
PIK3CB
0.020 AlteredExpression disease BEFREE Taken together, our findings indicate that SULT1C2A enhanced Foxo4 expression by negatively modulating rno-miR-466c-5p expression via the PI3K-ATK signalling pathway in the rat model of VAD-CS. 31044535 2019
Entrez Id: 5290
Gene Symbol: PIK3CA
PIK3CA
0.020 AlteredExpression disease BEFREE Relative to the VAD group, the VAN group also had increased mRNA and protein levels of RARα and PI3K, and upregulated phosphorylated Akt/Bad levels in vivo. 29534734 2018
Entrez Id: 83875
Gene Symbol: BCO2
BCO2
0.020 Biomarker disease BEFREE These data demonstrate that BCO2 prevents β-carotene toxicity during embryogenesis under severe vitamin A deficiency. 29892071 2018