Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.500 GeneticVariation group BEFREE We previously reported an unusual accumulation of CNS tumors associated with a unique p53 germline mutation, Y236delta (deletion of codon 236). 11103934 2000
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.500 GeneticVariation group BEFREE Li-Fraumeni (LFS) and Li-Fraumeni-like (LFL) syndromes are associated to germline TP53 mutations, and are characterized by the development of central nervous system tumors, sarcomas, adrenocortical carcinomas, and other early-onset tumors. 22691290 2012
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.500 GeneticVariation group GWASCAT Genome-wide association study of glioma subtypes identifies specific differences in genetic susceptibility to glioblastoma and non-glioblastoma tumors. 28346443 2017
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.500 GeneticVariation group BEFREE The p53 tumor suppressor gene is frequently mutated in human cancer, and is important in the pathogenesis of other central nervous system (CNS) tumors. 8699232 1996
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.500 GeneticVariation group BEFREE Given the high accuracy and sensitivity of the yeast assay and previous negative results using conventional techniques, this indicates that p53 mutation is a rare event in non-astrocytic CNS tumor types examined here. 9542595 1998
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.500 GeneticVariation group BEFREE It remains to be shown whether this unusual pattern of CNS tumors is due to an organ-specific effect of this particular p53 mutation or whether it reflects the genetic background of the affected families. 9825943 1998
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.500 GeneticVariation group BEFREE Our results not only confirm the low penetrance of the TP53 gene on pediatric CNS tumors, but also provide further evidence of a putative tumor suppressor gene distal to TP53, between markers (D17S938, D17S926) and 17pter, specifically taking part in the development of PNET. 9546059 1998
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.500 GeneticVariation group GWASCAT Genome-wide association study identifies multiple susceptibility loci for glioma. 26424050 2015
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.500 GeneticVariation group BEFREE The observation that somatic p53 mutations in sporadic brain tumours are largely restricted to those of astrocytic origin and that astrocytomas also prevail among CNS neoplasms associated with p53 germline mutation strongly suggests, that p53 mutations are capable of initiating neoplastic transformation in astrocytes of the human nervous system. 7582239 1995
Entrez Id: 8314
Gene Symbol: BAP1
BAP1
0.310 GeneticVariation group BEFREE Notably, tumors demonstrating chromosome 3 monosomy and BAP1 alterations formed a homogeneous subset within this group.<b>Conclusions:</b> Integrated molecular profiling aids in distinguishing primary from metastatic melanocytic tumors of the central nervous system. 29891723 2018
Entrez Id: 324
Gene Symbol: APC
APC
0.310 GeneticVariation group BEFREE Genotype-phenotype correlations between APC gene mutations and central nervous system (CNS) tumors have, thus far not been successful. 17238184 2007
Entrez Id: 6598
Gene Symbol: SMARCB1
SMARCB1
0.190 GeneticVariation group BEFREE We and other investigators have identified deletions and mutations of the INI1 gene in the majority of rhabdoid tumors of the central nervous system, kidney, and extrarenal tissues. 12112529 2002
Entrez Id: 6598
Gene Symbol: SMARCB1
SMARCB1
0.190 GeneticVariation group BEFREE Mutations of the INI1 rhabdoid tumor suppressor gene in medulloblastomas and primitive neuroectodermal tumors of the central nervous system. 10914721 2000
Entrez Id: 6598
Gene Symbol: SMARCB1
SMARCB1
0.190 GeneticVariation group BEFREE The highest frequencies of INI1 mutations for kidney tumors were seen in exons 2, 6, and 7, compared with exons 5 and 9 for CNS tumors. 12429635 2002
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.130 GeneticVariation group GWASCAT Genome-wide association study identifies multiple susceptibility loci for glioma. 26424050 2015
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.130 GeneticVariation group BEFREE The Consortium to Inform Molecular and Practical Approaches to CNS Tumor Taxonomy (cIMPACT-NOW) has recommended that isocitrate dehydrogenase 1 and 2 wildtype (IDH1/2wt) diffuse lower-grade gliomas (LGGs) WHO grade II or III that present with a) a telomerase reverse transcriptase promoter mutation (pTERTmt), and/or b) gain of chromosome 7 combined with loss of chromosome 10, and/or c) epidermal growth factor receptor (EGFR) amplification should be reclassified as diffuse astrocytic glioma, IDH1/2-wildtype, with molecular features of glioblastoma, WHO grade IV (IDH1/2wt astrocytomas WHO IV). 31637414 2019
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.130 GeneticVariation group GWASCAT Chromosome 7p11.2 (EGFR) variation influences glioma risk. 21531791 2011
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.130 GeneticVariation group GWASCAT Genome-wide association study of glioma subtypes identifies specific differences in genetic susceptibility to glioblastoma and non-glioblastoma tumors. 28346443 2017
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.130 GeneticVariation group BEFREE Rearrangements of EGFR are known to occur in a significant fraction of glioblastomas, the most common and malignant form of central nervous system tumor. 9790506 1998
Entrez Id: 2130
Gene Symbol: EWSR1
EWSR1
0.120 GeneticVariation group BEFREE Testing for the EWSR1 mutation confirms the diagnosis of Ewing sarcoma and excludes other types of embryonal CNS tumors. 29285586 2018
Entrez Id: 64754
Gene Symbol: SMYD3
SMYD3
0.100 GeneticVariation group GWASDB Variants in the CDKN2B and RTEL1 regions are associated with high-grade glioma susceptibility. 19578366 2009
Entrez Id: 51750
Gene Symbol: RTEL1
RTEL1
0.100 GeneticVariation group GWASCAT Variants in the CDKN2B and RTEL1 regions are associated with high-grade glioma susceptibility. 19578366 2009
Entrez Id: 137196
Gene Symbol: CCDC26
CCDC26
0.100 GeneticVariation group GWASCAT Genome-wide association study identifies five susceptibility loci for glioma. 19578367 2009
Entrez Id: 51750
Gene Symbol: RTEL1
RTEL1
0.100 GeneticVariation group GWASCAT Genome-wide association study of glioma subtypes identifies specific differences in genetic susceptibility to glioblastoma and non-glioblastoma tumors. 28346443 2017
Entrez Id: 55703
Gene Symbol: POLR3B
POLR3B
0.100 GeneticVariation group GWASCAT Genome-wide association study identifies multiple susceptibility loci for glioma. 26424050 2015