Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.080 GeneticVariation disease BEFREE In Caucasians, compared to never-smokers without HLA-DRB1*03:01 allele, ever-smokers with HLA-DRB1*03:01 allele had the highest odds of PM, ILD, ASA, and anti-Jo-1 autoantibodies. 29703532 2018
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.080 GeneticVariation disease BEFREE In contrast to European American patients with IIM, African American patients with IIM, in particular those with polymyositis, had no strong disease associations with HLA alleles of the 8.1 ancestral haplotype; however, African Americans with dermatomyositis or with anti-Jo-1 autoantibodies shared the risk factor HLA-DRB1*0301 with European Americans. 17075818 2006
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.080 Biomarker disease BEFREE Allele carrier frequency of HLA-DRB1*0803 was increased in the patients with IIM [p = 0.02, corrected p (pc) NS, 23% vs 14%, odds ratio (OR) = 1.9 (95% confidence interval, CI = 1.1-3.2)], with PM [p = 0.006, pc NS, 33%, OR 3.1 (95% CI 1.3-7.1)], and with anti-ARS autoantibodies [27%, p = 0.04, OR 2.3 (95% CI 1.0-5.1)] compared with controls. 15338498 2004
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.080 Biomarker disease BEFREE HLA-DRB1 studies in a large homogenous cohort of UK Caucasian patients have confirmed that polymyositis (PM) and dermatomyositis (DM) are not genetically identical diseases while other studies have shown that tumor necrosis factor alpha is genetically implicated in disease susceptibility. 15577608 2004
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.080 GeneticVariation disease BEFREE Furthermore, the frequency of the HLA-DRB1*0405-DQA1*03-DQB1*0401 haplotype was higher in the PM patients with PI than in the controls (50.0% vs 17.7%), and PM without PI (50.0% vs 5.5%). 11972875 2002
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.080 GeneticVariation disease BEFREE DRB1*08 alleles were significantly increased in patients (36.9 vs 20.5% in controls; p=0.004, OR=2.3), especially in PM and DM. 9632072 1998
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.080 GeneticVariation disease BEFREE In addition, there appeared to be a negative association of the HLA-DR2 alleles (DRB1*1501 and *1503) with PM (P = 0.007, Pcorr not significant, OR = 0.39), but not with DM or myositis overall. 8814062 1996
Entrez Id: 7098
Gene Symbol: TLR3
TLR3
0.040 AlteredExpression disease BEFREE The characteristic intracellular localization of HBD-3 near markers of degeneration and autophagy, and overexpression of endosomal TLR3 in sIBM hint at different pathogenetic mechanisms in sIBM compared with PM. 23608825 2014
Entrez Id: 7098
Gene Symbol: TLR3
TLR3
0.040 Biomarker disease BEFREE Co-localization between autophagic marker, LC3, and TLR4 and TLR3 was observed not only in sIBM but also in PM, DM and JDM muscle tissues. 25365350 2014
Entrez Id: 7098
Gene Symbol: TLR3
TLR3
0.040 AlteredExpression disease BEFREE TLR3 was upregulated particularly in JDM, being localized on vascular endothelial cells, muscle infiltrating cells (mainly myeloid dendritic cells), and regenerating myofibers; TLR7 and TLR9 proteins were present in IIM (prominently in PM), mainly on cell infiltrates, particularly plasma cells, and on some injured myofibers. 21670437 2011
Entrez Id: 7098
Gene Symbol: TLR3
TLR3
0.040 AlteredExpression disease BEFREE To assess the expression of Toll-like receptor 3 (TLR-3) and TLR-7 in muscle tissue from patients with polymyositis (PM) and dermatomyositis (DM) and to investigate the function and regulation of TLR-3 in cultured muscle cells. 20309865 2010
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.040 GeneticVariation disease BEFREE The TCR was first identified in a rare form of polymyositis characterized by a monoclonal infiltrate of gammadelta T cells which invaded and destroyed skeletal muscle fibers. 12077283 2002
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.040 AlteredExpression disease BEFREE In an attempt to understand the significance of gamma delta T cells in the IIM, we utilized a sensitive polymerase chain reaction (PCR) technique to evaluate gamma delta T cell receptor (TCR) gene expression in 45 muscle biopsies obtained from 42 IIM patients (17 polymyositis, 12 dermatomyositis, and 13 inclusion body myositis). gamma delta TCR gene expression was not detected in 36 specimens, the majority of muscle biopsies surveyed. gamma delta TCR gene expression by muscle-infiltrating lymphocytes was detected among nine clinically heterogeneous patients. 7774065 1995
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.040 AlteredExpression disease BEFREE We utilized the PCR to study TCR V gene expression in muscle biopsies from nine polymyositis (PM) and eight dermatomyositis (DM) patients, all of whom had autoantibodies directed against histidyl-transfer RNA synthetase (anti-Jo-1 autoantibodies). 8133064 1994
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.040 GeneticVariation disease BEFREE A variety of rearranged variable TCR genes was found in polymyositis, V alpha 1, V alpha 5, V beta 1, and V beta 15 being the most common (present in 60-100% of patients). 8514895 1993
Entrez Id: 54106
Gene Symbol: TLR9
TLR9
0.030 AlteredExpression disease BEFREE TLR9 and Smad2 were up-regulated in lung tissue of PM group than control group, and NETs further increased TLR9 and Smad2 expressions. 31821687 2020
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.030 Biomarker disease BEFREE 18F-FDG PET/CT in Graft Versus Host Disease-Associated Polymyositis. 31693622 2020
Entrez Id: 2965
Gene Symbol: GTF2H1
GTF2H1
0.030 Biomarker disease BEFREE Probably p62 immunostaining could help to distinguish PM patients that are going to become sIBM, but to date there has been no systematic study to clarify p62 utility in myositis. 31253480 2019
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.030 Biomarker disease BEFREE Effect of CTLA4-Ig (abatacept) treatment on T cells and B cells in peripheral blood of patients with polymyositis and dermatomyositis. 30451307 2019
Entrez Id: 8878
Gene Symbol: SQSTM1
SQSTM1
0.030 Biomarker disease BEFREE Probably p62 immunostaining could help to distinguish PM patients that are going to become sIBM, but to date there has been no systematic study to clarify p62 utility in myositis. 31253480 2019
Entrez Id: 3605
Gene Symbol: IL17A
IL17A
0.030 AlteredExpression disease BEFREE Median serum IL-17A level was higher in patients with PM and DM than the control group (0.73 vs. 0.49 vs. 0.35 pg/mL, respectively; p<0.050) and higher in PM when compared to DM (p<0.001). 30620283 2019
Entrez Id: 23636
Gene Symbol: NUP62
NUP62
0.030 Biomarker disease BEFREE Probably p62 immunostaining could help to distinguish PM patients that are going to become sIBM, but to date there has been no systematic study to clarify p62 utility in myositis. 31253480 2019
Entrez Id: 51164
Gene Symbol: DCTN4
DCTN4
0.030 Biomarker disease BEFREE Probably p62 immunostaining could help to distinguish PM patients that are going to become sIBM, but to date there has been no systematic study to clarify p62 utility in myositis. 31253480 2019
Entrez Id: 10657
Gene Symbol: KHDRBS1
KHDRBS1
0.030 Biomarker disease BEFREE Probably p62 immunostaining could help to distinguish PM patients that are going to become sIBM, but to date there has been no systematic study to clarify p62 utility in myositis. 31253480 2019
Entrez Id: 51284
Gene Symbol: TLR7
TLR7
0.030 AlteredExpression disease BEFREE Endurance exercise that is associated with improved muscle and mitochondrial function in PM and DM patients decreased TLR7 and HRK expression identifying these as therapeutic targets. 31135059 2019