Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 GeneticVariation disease BEFREE To compare the risk of active tuberculosis between tumor necrosis factor antagonist users who have received treatment for latent tuberculosis with those who have not. 28253020 2017
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 GeneticVariation disease BEFREE Biological therapy using TNF-α inhibitors is very effective but is associated with an increased risk of opportunistic infections, including active tuberculosis. 29792084 2018
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 GeneticVariation disease BEFREE Risk of active tuberculosis in patients with inflammatory arthritis receiving TNF inhibitors: a look beyond the baseline tuberculosis screening protocol. 29150737 2018
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 GeneticVariation disease BEFREE Within 1 year after the initiation of TNF inhibitor treatment, 1 patient in the LTBI group (1/84; 1.2%) and 7 patients in the non-LTBI group (7/656; 1.1%) developed active tuberculosis. 30450023 2018
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 GeneticVariation disease BEFREE Tumor necrosis factor alpha (TNF-α) inhibitors are linked with increased risk of reactivation of active tuberculosis. 29562270 2018
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 GeneticVariation disease BEFREE The multiple adverse effects of TNF-α inhibition have been identified, including a two-to four-fold increased risk of active tuberculosis and other granulomatous conditions and an increased occurrence of some other serious bacterial, fungal and certain viral infections. 30732563 2019
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.100 GeneticVariation disease BEFREE The greatest diagnostic accuracy in discriminating active TB vs. LTBI or cured TB was reached by evaluating the CD27(+) CD45RA(-) cells within the IFN-γ⁺ CD4⁺ T-cell subset (76.92 sensitivity for both, and 90% and 91.67% specificity, respectively), although the use of the CD27 MFI RATIO allows for stricter data analysis, independent of the operator. 26253021 2015
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.060 GeneticVariation disease BEFREE IL-10 (-1082) GG genotype was positively associated with HIV-TB, whereas AG with HIV and AA with TB. 22507621 2012
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.060 GeneticVariation disease BEFREE The high-IL-1β expressing genotype was associated with the development of active tuberculosis, the severity of pulmonary disease and poor treatment outcome in TB patients. 25329476 2014
Entrez Id: 2096
Gene Symbol: ESAT
ESAT
0.060 GeneticVariation disease BEFREE In patients with positive ELISpot in pleural fluid (n = 16), the PPV for TB was 85.7%, which increased to 91.7% for the ESAT-6 panel and 92.3% for the CFP-10 panel after the introduction of a cut-off >1.0 for the ratio between the pleural fluid and blood interferon-gamma responses. 28024452 2017
Entrez Id: 3605
Gene Symbol: IL17A
IL17A
0.050 GeneticVariation disease BEFREE Overall, our findings demonstrated that the AA genotype from the IL-17A rs2275913 SNP is positively associated with protection to active tuberculosis but related to higher disease severity in the Argentinean population. 28098168 2017
Entrez Id: 3606
Gene Symbol: IL18
IL18
0.040 GeneticVariation disease BEFREE Our results suggest that IL-18(-137G/A) and IL-18(-607A/C) polymorphisms may not be risk factors for susceptibility to TB in the Polish population. 31301271 2019
Entrez Id: 6347
Gene Symbol: CCL2
CCL2
0.030 GeneticVariation disease BEFREE The CCL2-2518G allele (OR 1.51, 95%CI 1.11-2.04, P = 0.008) showed significant association with susceptibility to TB. 22137597 2012
Entrez Id: 7097
Gene Symbol: TLR2
TLR2
0.030 GeneticVariation disease BEFREE Multilocus analyses between polymorphisms in SLC11A1 and 11 TB candidate genes detected interactions between SLC11A1 and inducible nitric oxide synthase (NOS2A) in Caucasians (rs3731863 [SLC11A1] x rs8073782 [NOS2A], P = 0.009; rs3731863 [SLC11A1] x rs17722851 [NOS2A], P = 0.007) and toll-like receptor 2 (TLR2) in African-Americans (rs3731865 [SLC11A1] x rs1816702, P = 0.005). 19723394 2009
Entrez Id: 5199
Gene Symbol: CFP
CFP
0.030 GeneticVariation disease BEFREE In patients with positive ELISpot in pleural fluid (n = 16), the PPV for TB was 85.7%, which increased to 91.7% for the ESAT-6 panel and 92.3% for the CFP-10 panel after the introduction of a cut-off >1.0 for the ratio between the pleural fluid and blood interferon-gamma responses. 28024452 2017
Entrez Id: 6347
Gene Symbol: CCL2
CCL2
0.030 GeneticVariation disease BEFREE Genomic DNA from patients with active TB (168 cases of pulmonary TB and 55 cases of extrapulmonary TB) and ethnically controls (150 cases) was genotyped for the MCP-1 -2518 A/G SNP by polymerase chain reaction fragment length polymorphism (PCR-RFLP). 21384169 2011
Entrez Id: 5199
Gene Symbol: CFP
CFP
0.030 GeneticVariation disease BEFREE In order to identify immunodominant antigens of Mycobacterium tuberculosis that may be used in the serodiagnosis of active tuberculosis (TB), we designed an M. tuberculosis fusion protein consisting of CFP-10 (10-kDa culture filtrate protein), ESAT-6 (6-kDa early secreted antigenic target), and the extracellular domain fragment of PPE68 (PPE68'). 22357648 2012
Entrez Id: 7099
Gene Symbol: TLR4
TLR4
0.020 GeneticVariation disease BEFREE The TLR4 ASP299GLY polymorphism is a risk factor for active tuberculosis in Caucasian HIV-infected patients. 20226000 2010
Entrez Id: 114548
Gene Symbol: NLRP3
NLRP3
0.020 GeneticVariation disease BEFREE Our aim was to investigate the association between polymorphisms in CARD8 and NLRP3 and active tuberculosis (TB) as well as their relationship to treatment outcome in a high-endemic setting for TB. 30816317 2019
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.020 GeneticVariation disease BEFREE In IGRA+ suspected active TB patients, the sensitivity, specificity, PPV and NPV of IL-6 response (with cutoff of 235.2 pg/ml) were 85.7%, 100%, 100% and 51.5% for diagnosing aTB, respectively. 29174965 2018
Entrez Id: 7099
Gene Symbol: TLR4
TLR4
0.020 GeneticVariation disease BEFREE We found a greater risk of developing active tuberculosis as well as a reduction in CD4 T-cell counts in patients with the Asp299Gly TLR4 polymorphism. 17545720 2007
Entrez Id: 114548
Gene Symbol: NLRP3
NLRP3
0.020 GeneticVariation disease BEFREE Activation of the NLRP3 inflammasome by Mycobacterium tuberculosis is uncoupled from susceptibility to active tuberculosis. 22101787 2012
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
0.020 GeneticVariation disease BEFREE Age- and gender-specific effects on NRAMP1 gene polymorphisms and risk of the development of active tuberculosis in Tunisian populations. 22609013 2012
Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
0.020 GeneticVariation disease BEFREE SLC11A1 polymorphism rs3731865 was associated with TB in African-Americans, consistent with previous findings in West Africans. 19723394 2009
Entrez Id: 57570
Gene Symbol: TRMT5
TRMT5
0.010 GeneticVariation disease BEFREE A 5-protein signature, TB Risk Model 5 (TRM5), was discovered in the ACS training set and verified by blind prediction in the ACS test set. 30990820 2019