Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5961
Gene Symbol: PRPH2
PRPH2
0.010 Biomarker disease BEFREE In this study, we screened 87 overlapping synthetic peptides encoded by five RD2 proteins for diagnosing tuberculosis epitopes in 50 active tuberculosis (TB) cases, 31 non-tuberculosis patients and 36 healthy individuals. 30528601 2020
Entrez Id: 7248
Gene Symbol: TSC1
TSC1
0.010 Biomarker disease BEFREE The lateral flow urine lipoarabinomannan (LF-LAM) assay Alere Determine™ TB LAM Ag is recommended by the World Health Organization (WHO) to help detect active tuberculosis in HIV-positive people with severe HIV disease. 31633805 2019
Entrez Id: 494335
Gene Symbol: MIR423
MIR423
0.010 AlteredExpression disease BEFREE Since the inhibition of autolysosome formation plays a critical role in tuberculosis occurrence, our findings suggests that miR-423-5p could suppress autophagosome-lysosome fusion by post-transcriptional regulation of VPS33A, which might be important for the occurrence of active tuberculosis. 30898038 2019
Entrez Id: 57570
Gene Symbol: TRMT5
TRMT5
0.010 GeneticVariation disease BEFREE A 5-protein signature, TB Risk Model 5 (TRM5), was discovered in the ACS training set and verified by blind prediction in the ACS test set. 30990820 2019
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.010 Biomarker disease BEFREE Surprisingly, BTLA expression, both alone and in combination with CTLA-4 and PD-1, was markedly downregulated on Mtb-specific CD4 T cells in HIV-infected individuals with active TB. 31497018 2019
Entrez Id: 3002
Gene Symbol: GZMB
GZMB
0.010 Biomarker disease BEFREE Our results show that, in response to Rv0140, granzyme B seems to allow better discrimination of LTBI from aTB with areas under the curve (AUC) of 0.88 (95% CI 0.79-0.98) as compared to IFN-γ with AUC of 0.85 (95% CI 0.74-0.96) even though CI overlap. 30211958 2019
Entrez Id: 3902
Gene Symbol: LAG3
LAG3
0.010 Biomarker disease BEFREE Signature genes exhibited a variety of transcriptional patterns including both TB-only and HIV-only response genes and genes with expression patterns driven by interactions between HIV and TB infection states, including the CD8+ T-cell receptor LAG3 and the apoptosis-related gene CERKL. 31306460 2019
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.010 Biomarker disease BEFREE The lateral flow urine lipoarabinomannan (LF-LAM) assay Alere Determine™ TB LAM Ag is recommended by the World Health Organization (WHO) to help detect active tuberculosis in HIV-positive people with severe HIV disease. 31633805 2019
Entrez Id: 10148
Gene Symbol: EBI3
EBI3
0.010 Biomarker disease BEFREE In the current study, we found that the mRNA expressions of the both subunits (p35 and Ebi3) of IL-35 by circulating B cells were increased in ATB patients. 31170628 2019
Entrez Id: 151888
Gene Symbol: BTLA
BTLA
0.010 AlteredExpression disease BEFREE Surprisingly, BTLA expression, both alone and in combination with CTLA-4 and PD-1, was markedly downregulated on Mtb-specific CD4 T cells in HIV-infected individuals with active TB. 31497018 2019
Entrez Id: 22900
Gene Symbol: CARD8
CARD8
0.010 GeneticVariation disease BEFREE Our aim was to investigate the association between polymorphisms in CARD8 and NLRP3 and active tuberculosis (TB) as well as their relationship to treatment outcome in a high-endemic setting for TB. 30816317 2019
Entrez Id: 10068
Gene Symbol: IL18BP
IL18BP
0.010 Biomarker disease BEFREE Complex co-expression of serum IL-18BP and IL-37, IP-10 and IFN-γ was identified as the highest discriminative biomarker set for the diagnosis of ATB. 31821340 2019
Entrez Id: 100233209
Gene Symbol: PCED1B-AS1
PCED1B-AS1
0.010 AlteredExpression disease BEFREE It was found that PCED1B-AS1 expression was down-regulated in patients with active tuberculosis, accompanied by significant attenuated monocyte apoptosis and enhanced autophagy. 30621915 2019
Entrez Id: 2137
Gene Symbol: EXTL3
EXTL3
0.010 Biomarker disease BEFREE HBsAg positivity was 12.2%, HCVAb 3.3%, HIVAb 1.6%, TPPA+RPR positivity in the 0.7%; 10.2% had a positive Mantoux test; 5.6% had Chest X-rays positive for signs of infection and 6 patients had an active tuberculosis. 30377049 2019
Entrez Id: 9021
Gene Symbol: SOCS3
SOCS3
0.010 Biomarker disease BEFREE The results suggest that particular SOCS-3 SNPs are dependent on gender or age to influence TB susceptibility in the Han Taiwanese. 30580155 2019
Entrez Id: 10538
Gene Symbol: BATF
BATF
0.010 AlteredExpression disease BEFREE There was a positive correlation between BATF expression and PD-1 expression in ATB patients (for CD4<sup>+</sup> T cells, <i>r</i> = 0.6761, <i>P</i> = 0.0158; for CD8<sup>+</sup> T cells, <i>r</i> = 0.6104, <i>P</i> = 0.0350). 31681314 2019
Entrez Id: 406978
Gene Symbol: MIR199B
MIR199B
0.010 Biomarker disease BEFREE MiR-892b, miR-199b-5p and miR-582-5p could be considered promising novel diagnostic biomarkers for active tuberculosis. 31175974 2019
Entrez Id: 4185
Gene Symbol: ADAM11
ADAM11
0.010 AlteredExpression disease BEFREE The AUC of the 3-signature biosignature (eotaxin, MDC, MCP-1) in differentiating ATB from LTBI was 0.94, with the sensitivity and specificity of 87.76% and 91.84%, respectively. 30528869 2019
Entrez Id: 65082
Gene Symbol: VPS33A
VPS33A
0.010 AlteredExpression disease BEFREE Since the inhibition of autolysosome formation plays a critical role in tuberculosis occurrence, our findings suggests that miR-423-5p could suppress autophagosome-lysosome fusion by post-transcriptional regulation of VPS33A, which might be important for the occurrence of active tuberculosis. 30898038 2019
Entrez Id: 27178
Gene Symbol: IL37
IL37
0.010 Biomarker disease BEFREE Complex co-expression of serum IL-18BP and IL-37, IP-10 and IFN-γ was identified as the highest discriminative biomarker set for the diagnosis of ATB. 31821340 2019
Entrez Id: 6367
Gene Symbol: CCL22
CCL22
0.010 AlteredExpression disease BEFREE The AUC of the 3-signature biosignature (eotaxin, MDC, MCP-1) in differentiating ATB from LTBI was 0.94, with the sensitivity and specificity of 87.76% and 91.84%, respectively. 30528869 2019
Entrez Id: 54708
Gene Symbol: MARCHF5
MARCHF5
0.010 GeneticVariation disease BEFREE Prognostic performance of both signatures was validated in an independent cohort of 1,948 HIV-negative household TB contacts from The Gambia (aged 15-60 years, 66% female), longitudinally followed up for 2 years between March 5, 2007 and October 21, 2010, sampled at baseline, month 6, and month 18. 30990820 2019
Entrez Id: 1841
Gene Symbol: DTYMK
DTYMK
0.010 Biomarker disease BEFREE We recently showed that assays of M.tb thymidylate kinase (TMKmt) antigen and host specific IgG can differentiate ATB from LTBI and or no TB (NTB, or healthy controls). 29548281 2018
Entrez Id: 3439
Gene Symbol: IFNA1
IFNA1
0.010 Biomarker disease BEFREE We sought to identify immune markers in Mtb-specific IFN-γ<sup>+</sup>CD4<sup>+</sup> T cells and hypothesized that expression of caspase-3 Mtb-specific CD4<sup>+</sup> T cells would be associated with ATB. 29983703 2018
Entrez Id: 9636
Gene Symbol: ISG15
ISG15
0.010 Biomarker disease BEFREE ISG15-Induced IL-10 Is a Novel Anti-Inflammatory Myeloid Axis Disrupted during Active Tuberculosis. 29311364 2018