Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4287
Gene Symbol: ATXN3
ATXN3
0.010 Biomarker group BEFREE In MJD, both the pons and the cerebellum were atrophic, cerebellar atrophy being less pronounced than that in SCA1 and SCA6. 10402032 1999
Entrez Id: 3479
Gene Symbol: IGF1
IGF1
0.010 Biomarker group BEFREE We investigated the role of transforming growth factor beta-1 (TGF-beta 1), insulin-like growth factor-1 (IGF-1) and relative receptors in five tissue samples from atrophic post-menopausal endometria. 10227013 1999
Entrez Id: 6310
Gene Symbol: ATXN1
ATXN1
0.010 Biomarker group BEFREE In SCA1, the ventral pons was atrophic in proportion to the amount of cerebellar atrophy. 10402032 1999
Entrez Id: 24
Gene Symbol: ABCA4
ABCA4
0.010 GeneticVariation group BEFREE Mutations in the Stargardt disease gene (ABCR) were previously reported in patients with atrophic forms of AMD. 10634626 2000
Entrez Id: 4744
Gene Symbol: NEFH
NEFH
0.010 Biomarker group BEFREE The atrophic process is associated with hind limb paralysis during aging in mice deficient for both NF-M and NF-H proteins. 11090858 2000
Entrez Id: 4741
Gene Symbol: NEFM
NEFM
0.010 Biomarker group BEFREE The atrophic process is associated with hind limb paralysis during aging in mice deficient for both NF-M and NF-H proteins. 11090858 2000
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.110 Biomarker group BEFREE Further analysis demonstrated the presence of AP-2alpha in 2 (40%) of 5 atrophic normal epithelium, in 4 (24%) of 17 cases of benign prostatic hyperplasia, and in 2 (13%) of 13 cases of high-grade prostatic intraepithelial neoplasia. 11751506 2001
Entrez Id: 7832
Gene Symbol: BTG2
BTG2
0.010 AlteredExpression group BEFREE BTG2 was expressed in all hyperproliferative atrophic peripheral zone lesions examined (simple atrophy, post-atrophic hyperplasia and proliferative inflammatory atrophy), but was undetectable or detectable at very low levels in the hyperproliferative epithelial cells of HGPIN and prostate cancer. 11470758 2001
Entrez Id: 348
Gene Symbol: APOE
APOE
0.010 Biomarker group BEFREE The effect of APOE-4 did not differ significantly between males and females and was observed consistently for both atrophic and neovascular ARM. 12567264 2002
Entrez Id: 1636
Gene Symbol: ACE
ACE
0.010 GeneticVariation group BEFREE We report an association between an Alu polymorphism in the angiotensin-converting enzyme (ACE) gene with the dry/atrophic form of AMD. 12099691 2002
Entrez Id: 1308
Gene Symbol: COL17A1
COL17A1
0.010 GeneticVariation group BEFREE To test its applicability in skin gene therapy, SMaRT was used in the context of the 4003delTC mutation in the collagen XVII gene (COL17A1) causing generalized atrophic benign junctional epidermolysis bullosa. 12631245 2003
Entrez Id: 5979
Gene Symbol: RET
RET
0.010 GeneticVariation group BEFREE A new germline RET mutation apparently devoid of transforming activity serendipitously discovered in a patient with atrophic autoimmune thyroiditis and primary ovarian failure. 15472167 2004
Entrez Id: 129831
Gene Symbol: RBM45
RBM45
0.010 Biomarker group BEFREE We have demonstrated that the DRB1*04 allele is associated with autoimmune thyroiditis, and that there are genotypic differences regarding the presentation forms with a strong association between DRB1*04 and DQB1*03 and the atrophic form only. 15305234 2004
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.010 Biomarker group BEFREE We have demonstrated that the DRB1*04 allele is associated with autoimmune thyroiditis, and that there are genotypic differences regarding the presentation forms with a strong association between DRB1*04 and DQB1*03 and the atrophic form only. 15305234 2004
Entrez Id: 960
Gene Symbol: CD44
CD44
0.010 Biomarker group BEFREE Our observations provide a novel CD44-dependent mechanism for HA oligosaccharide-induced keratinocyte proliferation and suggest that topical HAFi application may provide an attractive therapeutic option in human skin atrophy. 17177600 2006
Entrez Id: 11202
Gene Symbol: KLK8
KLK8
0.010 AlteredExpression group BEFREE Levels of TADG-14/KLK8 mRNA expression correlated with hK8 protein levels. hK8 was detected in 73.3% (11/15) of endometria with a significantly higher detection rate in the proliferative compared to secretory and atrophic phase endometria (p = 0.0002). 16888409 2006
Entrez Id: 6279
Gene Symbol: S100A8
S100A8
0.010 GeneticVariation group BEFREE The presence of the cagA gene is strongly associated with atrophic and active gastritis. 16724992 2006
Entrez Id: 6103
Gene Symbol: RPGR
RPGR
0.010 GeneticVariation group BEFREE A total of 240 different RPGR mutations have been reported, including 24 novel ones in this work, which are associated with X-linked retinitis pigmentosa (XLRP) (95%), cone, cone-rod dystrophy, or atrophic macular atrophy (3%), and syndromal retinal dystrophies with ciliary dyskinesia and hearing loss (2%). 17195164 2007
Entrez Id: 11186
Gene Symbol: RASSF1
RASSF1
0.010 PosttranslationalModification group BEFREE RASSF1A methylation was also observed in samples of cyclic (n = 14), hyperplastic (n = 8), and atrophic (n = 13) endometrial tissues in 21%, 50% and 38%, respectively. 17170014 2007
Entrez Id: 55612
Gene Symbol: FERMT1
FERMT1
0.130 Biomarker group BEFREE Here, we show that deleting Kindlin-1 in mice gives rise to skin atrophy and an intestinal epithelial dysfunction with similarities to human UC. 19057668 2008
Entrez Id: 10269
Gene Symbol: ZMPSTE24
ZMPSTE24
0.110 GeneticVariation group BEFREE We now report novel compound heterozygous mutations in exon 1 (c.121C>T; p.Q41X) and exon 6 (c.743C>T; p.P248L) in ZMPSTE24 in two Japanese sisters, 7- and 3-year old, with severe MAD and characteristic facies and atrophic skin. 18435794 2008
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.020 Biomarker group BEFREE We further demonstrate that the p53 gene from atrophic cells expressing TAg is wild type, whereas tumor cells expressing detectable nuclear p53 contain a mix of wild-type and mutant p53 genes, suggesting that TAg may inactivate p53 in the atrophic cells. 18160432 2008
Entrez Id: 5225
Gene Symbol: PGC
PGC
0.010 Biomarker group BEFREE Atrophic body gastritis (ABG) was associated with pepsinogen PGI/PGII < 3.4 (OR = 4.9; P < 0.04) and alcohol consumption (OR = 7.3; P < 0.02). 19030199 2008
Entrez Id: 2821
Gene Symbol: GPI
GPI
0.010 Biomarker group BEFREE Atrophic body gastritis (ABG) was associated with pepsinogen PGI/PGII < 3.4 (OR = 4.9; P < 0.04) and alcohol consumption (OR = 7.3; P < 0.02). 19030199 2008
Entrez Id: 54858
Gene Symbol: PGPEP1
PGPEP1
0.010 Biomarker group BEFREE Atrophic body gastritis (ABG) was associated with pepsinogen PGI/PGII < 3.4 (OR = 4.9; P < 0.04) and alcohol consumption (OR = 7.3; P < 0.02). 19030199 2008