Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1308
Gene Symbol: COL17A1
COL17A1
0.010 GeneticVariation group BEFREE To test its applicability in skin gene therapy, SMaRT was used in the context of the 4003delTC mutation in the collagen XVII gene (COL17A1) causing generalized atrophic benign junctional epidermolysis bullosa. 12631245 2003
Entrez Id: 348
Gene Symbol: APOE
APOE
0.010 Biomarker group BEFREE The effect of APOE-4 did not differ significantly between males and females and was observed consistently for both atrophic and neovascular ARM. 12567264 2002
Entrez Id: 1636
Gene Symbol: ACE
ACE
0.010 GeneticVariation group BEFREE We report an association between an Alu polymorphism in the angiotensin-converting enzyme (ACE) gene with the dry/atrophic form of AMD. 12099691 2002
Entrez Id: 7832
Gene Symbol: BTG2
BTG2
0.010 AlteredExpression group BEFREE BTG2 was expressed in all hyperproliferative atrophic peripheral zone lesions examined (simple atrophy, post-atrophic hyperplasia and proliferative inflammatory atrophy), but was undetectable or detectable at very low levels in the hyperproliferative epithelial cells of HGPIN and prostate cancer. 11470758 2001
Entrez Id: 24
Gene Symbol: ABCA4
ABCA4
0.010 GeneticVariation group BEFREE Mutations in the Stargardt disease gene (ABCR) were previously reported in patients with atrophic forms of AMD. 10634626 2000
Entrez Id: 4744
Gene Symbol: NEFH
NEFH
0.010 Biomarker group BEFREE The atrophic process is associated with hind limb paralysis during aging in mice deficient for both NF-M and NF-H proteins. 11090858 2000
Entrez Id: 4741
Gene Symbol: NEFM
NEFM
0.010 Biomarker group BEFREE The atrophic process is associated with hind limb paralysis during aging in mice deficient for both NF-M and NF-H proteins. 11090858 2000
Entrez Id: 4287
Gene Symbol: ATXN3
ATXN3
0.010 Biomarker group BEFREE In MJD, both the pons and the cerebellum were atrophic, cerebellar atrophy being less pronounced than that in SCA1 and SCA6. 10402032 1999
Entrez Id: 3479
Gene Symbol: IGF1
IGF1
0.010 Biomarker group BEFREE We investigated the role of transforming growth factor beta-1 (TGF-beta 1), insulin-like growth factor-1 (IGF-1) and relative receptors in five tissue samples from atrophic post-menopausal endometria. 10227013 1999
Entrez Id: 6310
Gene Symbol: ATXN1
ATXN1
0.010 Biomarker group BEFREE In SCA1, the ventral pons was atrophic in proportion to the amount of cerebellar atrophy. 10402032 1999
Entrez Id: 341
Gene Symbol: APOC1
APOC1
0.010 Biomarker group BEFREE In addition to atrophic sebaceous glands, the meibomian glands were also found to be severely atrophic in APOC1 transgenic mice. 9421476 1998
Entrez Id: 3064
Gene Symbol: HTT
HTT
0.010 Biomarker group BEFREE Huntingtin staining was more concentrated in the perinuclear cytoplasm and reduced or absent in processes of atrophic cortical neurons.Nuclear staining was also evident. 9382472 1997
Entrez Id: 2520
Gene Symbol: GAST
GAST
0.010 GeneticVariation group BEFREE To evaluate the involvement of the apoptosis-suppressing protein BCL-2 in the gastrin-dependent mechanism of induction of gastric enterochromaffin-like (ECL) cell carcinoids, the endocrine cell of the oxyntic mucosa were immunohistochemically investigated in (a) 10 normogastrinemic subjects with histologically normal gastric mucosa; (b) 22 patients with endocrine cell hyperplasia and affected by hypergastrinemic conditions with different risk of gastric carcinoid development, such as sporadic Zollinger-Ellison syndrome (sZES; n = 9), ZES associated with multiple endocrine neoplasia-1 (MEN-1; n = 4), and atrophic fundal gastritis (AFG; n = 9); (c) 14 patients with ECL gastric carcinoids accounting for a total of 31 tumors investigated. 8604810 1996
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.010 Biomarker group BEFREE To evaluate the involvement of the apoptosis-suppressing protein BCL-2 in the gastrin-dependent mechanism of induction of gastric enterochromaffin-like (ECL) cell carcinoids, the endocrine cell of the oxyntic mucosa were immunohistochemically investigated in (a) 10 normogastrinemic subjects with histologically normal gastric mucosa; (b) 22 patients with endocrine cell hyperplasia and affected by hypergastrinemic conditions with different risk of gastric carcinoid development, such as sporadic Zollinger-Ellison syndrome (sZES; n = 9), ZES associated with multiple endocrine neoplasia-1 (MEN-1; n = 4), and atrophic fundal gastritis (AFG; n = 9); (c) 14 patients with ECL gastric carcinoids accounting for a total of 31 tumors investigated. 8604810 1996
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.010 Biomarker group BEFREE At 16 weeks old, the gastrocnemius muscles of the IL-6 transgenic mice became atrophic as compared to those of the normal mice, while the body weights increased significantly. 7857261 1995
Entrez Id: 4049
Gene Symbol: LTA
LTA
0.010 GeneticVariation group BEFREE Also, there were no associations between the TNF beta gene polymorphism and either TBII-negative atrophic autoimmune thyroiditis or goitrous autoimmune thyroiditis. 7986390 1994
Entrez Id: 7253
Gene Symbol: TSHR
TSHR
0.010 Biomarker group BEFREE The tumor necrosis factor beta * 1 allele is linked significantly to HLA-DR8 in Koreans with atrophic autoimmune thyroiditis who are positive for thyrotropin receptor blocking antibody. 7986390 1994
Entrez Id: 1951
Gene Symbol: CELSR3
CELSR3
0.010 Biomarker group BEFREE Strongly positive immunoreaction to DRP at the neuromuscular junctions in all biopsied specimens and faint reaction on the surface membrane of atrophic fibers in amyotrophic lateral sclerosis suggest that DRP is an anchor protein of the acetylcholine receptor. 8460531 1993
Entrez Id: 2006
Gene Symbol: ELN
ELN
0.010 Biomarker group BEFREE Demonstration of elastin gene expression in human skin fibroblast cultures and reduced tropoelastin production by cells from a patient with atrophoderma. 3973023 1985
Entrez Id: 717
Gene Symbol: C2
C2
0.010 Biomarker group BEFREE This is the first description of an association between idiopathic atrophoderma and C2 deficient state. 315933 1979
Entrez Id: 2288
Gene Symbol: FKBP4
FKBP4
0.020 Biomarker group BEFREE We recently reported that REDD1 (regulated in development and DNA damage 1) and FKBP51 (FK506 binding protein 5), negative regulators of mTOR/Akt signaling, are induced by glucocorticoids in mouse and human skin and are central drivers of steroid skin atrophy. 30737086 2019
Entrez Id: 2289
Gene Symbol: FKBP5
FKBP5
0.020 Biomarker group BEFREE We recently reported that REDD1 (regulated in development and DNA damage 1) and FKBP51 (FK506 binding protein 5), negative regulators of mTOR/Akt signaling, are induced by glucocorticoids in mouse and human skin and are central drivers of steroid skin atrophy. 30737086 2019
Entrez Id: 2288
Gene Symbol: FKBP4
FKBP4
0.020 Biomarker group BEFREE As Akt/mTOR-GR crosstalk is usually negative in skin, our results suggest that Akt/mTOR activation could be responsible for the lack of increased GR function and resistance of FKBP51 KO mice to the steroid-induced skin atrophy. 30410676 2018
Entrez Id: 2289
Gene Symbol: FKBP5
FKBP5
0.020 Biomarker group BEFREE As Akt/mTOR-GR crosstalk is usually negative in skin, our results suggest that Akt/mTOR activation could be responsible for the lack of increased GR function and resistance of FKBP51 KO mice to the steroid-induced skin atrophy. 30410676 2018
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.020 Biomarker group BEFREE Decreased secreted frizzled-related protein 2 possibly establishes a positive feedback loop enhancing transforming growth factor-β1-mediated atrophic effects in inflammation-induced atrophy. 27661566 2017