Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6690
Gene Symbol: SPINK1
SPINK1
0.010 Biomarker disease BEFREE In this study, the outcome of alveolar cleft repair using microporous beta-tricalcium phosphate (β-TCP) was investigated in patients with unilateral cleft lip and palate. 30594478 2019
Entrez Id: 130749
Gene Symbol: CPO
CPO
0.010 Biomarker disease BEFREE We tested methylation profile difference at each CpG between controls (n = 436) and each of the cleft subtypes (92 cleft lip only, CLO; 84 cleft palate only, CPO; 132 cleft lip and palate, CLP). 30832715 2019
Entrez Id: 6573
Gene Symbol: SLC19A1
SLC19A1
0.010 GeneticVariation disease BEFREE Polymorphism of reduced folate carrier 1 (A80G) and non-syndromic cleft lip/palate: A systematic review and meta-analysis. 30579244 2019
Entrez Id: 6678
Gene Symbol: SPARC
SPARC
0.010 Biomarker disease BEFREE The ONT suture is effective to prevent uplifted nasal floor deformity on the cleft side// in unilateral complete cleft lip and palate at the time of primary nasolabial repair. 29719157 2019
Entrez Id: 27315
Gene Symbol: PGAP2
PGAP2
0.010 GeneticVariation disease BEFREE We identified a novel mouse mutant (<i>cleft lip/palate, edema and exencephaly; Clpex)</i> with a hypo-morphic mutation in <i>Post-Glycophosphatidylinositol Attachment to Proteins-2 (Pgap2)</i>, a component of the GPI biosynthesis pathway. 31232685 2019
Entrez Id: 80326
Gene Symbol: WNT10A
WNT10A
0.010 GeneticVariation disease BEFREE In conclusion we found an rs147680216 G>A mutation that was associated with non-syndromic cleft lip and palate in the Wnt10a gene. 31155400 2019
Entrez Id: 7474
Gene Symbol: WNT5A
WNT5A
0.010 Biomarker disease BEFREE In addition to new associations, we found loci with subtype-specific effects (e.g., GRHL3 [CP], WNT5A [CLP]), as well as loci associated with two or all three subtypes. 31172578 2019
Entrez Id: 4807
Gene Symbol: NHLH1
NHLH1
0.010 Biomarker disease BEFREE Patients with NSCL±P treated between August 2013 and September 2014 at the Cleft Lip and Palate Integral Care Center (CAIF), Curitiba, Brazil, were invited to participate. 29641750 2018
Entrez Id: 1000
Gene Symbol: CDH2
CDH2
0.010 GeneticVariation disease BEFREE A novel non-coding RNA within an intron of CDH2 and association of its SNP with non-syndromic cleft lip and palate. 29524576 2018
Entrez Id: 83871
Gene Symbol: RAB34
RAB34
0.010 GeneticVariation disease BEFREE We also show that Rab34 mutant mice exhibit polydactyly, and cleft-lip and -palate. 30301781 2018
Entrez Id: 5889
Gene Symbol: RAD51C
RAD51C
0.010 GeneticVariation disease BEFREE With only one previously described homozygous RAD51C variant to date, our findings expand the phenotypic spectrum of FANCO and suggest it should be part of the antenatal differential diagnosis for trisomy 13 and 18, due to the presence of atypical findings such as cleft lip and palate, holoprosencephaly, growth restriction and overlapping fingers. 29278735 2018
Entrez Id: 2312
Gene Symbol: FLG
FLG
0.010 Biomarker disease BEFREE Additionally, we detected great variations between individual CLP keratinocyte cell cultures in regard to their potential to terminally differentiate as assessed by the induction of Loricrin and Filaggrin. 30555344 2018
Entrez Id: 89780
Gene Symbol: WNT3A
WNT3A
0.010 Biomarker disease BEFREE Because Wnt3a is among the Wnts that contribute to nonsyndromic cleft lip and cleft palate in mouse and man, further investigation of Tinagl1 may help to elucidate mechanisms underlying these disorders. 27243669 2017
Entrez Id: 57698
Gene Symbol: SHTN1
SHTN1
0.010 Biomarker disease BEFREE After correcting for multiple testing, we observed significant associations between fetal single-nucleotide polymorphisms (SNPs) at IRF6, PAX7, 8q21.3, 8q24, KIAA1598-VAX1, and MAFB and isolated cleft lip only (CLO) and cleft lip and palate (CLP). 28662356 2017
Entrez Id: 57822
Gene Symbol: GRHL3
GRHL3
0.010 GeneticVariation disease BEFREE Significantly, we also report the identification of 2 unique missense mutations in the NME proteins in patients with CLP (NME1 R18Q in an IRF6 and GRHL3 mutation-negative patient with van der Woude syndrome and NME2 G71V in a patient with nonsyndromic CLP). 28767310 2017
Entrez Id: 57589
Gene Symbol: RIC1
RIC1
0.010 GeneticVariation disease BEFREE A founder mutation in RIC1 (KIAA1432) was identified in patients with cataract, brain atrophy, microcephaly with or without cleft lip and palate. 27878435 2017
Entrez Id: 8100
Gene Symbol: IFT88
IFT88
0.010 Biomarker disease BEFREE Intraflagellar transport 88 (IFT88) is crucial for craniofacial development in mice and is a candidate gene for human cleft lip and palate. 28069795 2017
Entrez Id: 7168
Gene Symbol: TPM1
TPM1
0.010 Biomarker disease BEFREE Significant associations were observed between isolated CLO and fetal SNPs near TPM1 and NOG1 and between CLP and fetal SNPs at ABCA4-ARHGAP29, THADA, FOXE1, and SPRY2. 28662356 2017
Entrez Id: 79823
Gene Symbol: CAMKMT
CAMKMT
0.010 Biomarker disease BEFREE The results involve the generation of CAD/CAM CLP-feeding plates. 28459132 2017
Entrez Id: 5081
Gene Symbol: PAX7
PAX7
0.010 Biomarker disease BEFREE After correcting for multiple testing, we observed significant associations between fetal single-nucleotide polymorphisms (SNPs) at IRF6, PAX7, 8q21.3, 8q24, KIAA1598-VAX1, and MAFB and isolated cleft lip only (CLO) and cleft lip and palate (CLP). 28662356 2017
Entrez Id: 80331
Gene Symbol: DNAJC5
DNAJC5
0.010 Biomarker disease BEFREE We assessed the formation of the oral microbiota in infants with complete cleft lip and palate (CLP <i>n</i> = 30) or cleft soft palate (CSP <i>n</i> = 25) in the neonatal period (T1 time) and again in the gum pad stage (T2 time). 28393073 2017
Entrez Id: 4830
Gene Symbol: NME1
NME1
0.010 GeneticVariation disease BEFREE Significantly, we also report the identification of 2 unique missense mutations in the NME proteins in patients with CLP (NME1 R18Q in an IRF6 and GRHL3 mutation-negative patient with van der Woude syndrome and NME2 G71V in a patient with nonsyndromic CLP). 28767310 2017
Entrez Id: 4281
Gene Symbol: MID1
MID1
0.010 GeneticVariation disease BEFREE XLOS-observed mutations within the MID1 B-box1 domain are associated with cleft lip/palate, wide-spaced eyes and hyperspadias. 28548391 2017
Entrez Id: 23560
Gene Symbol: GTPBP4
GTPBP4
0.010 Biomarker disease BEFREE Significant associations were observed between isolated CLO and fetal SNPs near TPM1 and NOG1 and between CLP and fetal SNPs at ABCA4-ARHGAP29, THADA, FOXE1, and SPRY2. 28662356 2017
Entrez Id: 889
Gene Symbol: KRIT1
KRIT1
0.010 Biomarker disease BEFREE The results involve the generation of CAD/CAM CLP-feeding plates. 28459132 2017