Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 79923
Gene Symbol: NANOG
NANOG
0.330 Biomarker disease BEFREE Identification of NANOG as a molecular marker of undifferentiated germ cell tumors provides a novel tool for identifying and classifying tumors of germ cell origin. 16206293 2005
Entrez Id: 4254
Gene Symbol: KITLG
KITLG
0.330 AlteredExpression disease BEFREE KITLG expression was consistently increased in the presence of PDE11A-inactivating defects, both at the RNA and protein levels, in familial testicular germ cell tumors. 23771924 2013
Entrez Id: 9573
Gene Symbol: GDF3
GDF3
0.320 GeneticVariation disease BEFREE Notably, human STELLAR is located distal to a previously uncharacterized homeobox gene, which is the human homolog of the recently identified murine gene, Nanog, and proximal to the GDF3 locus, whose transcription is restricted to germ cell tumor cells. 14990856 2004
Entrez Id: 9573
Gene Symbol: GDF3
GDF3
0.320 Biomarker disease CTD_human Retinoic acid represses a cassette of candidate pluripotency chromosome 12p genes during induced loss of human embryonal carcinoma tumorigenicity. 16168501 2005
Entrez Id: 9573
Gene Symbol: GDF3
GDF3
0.320 AlteredExpression disease BEFREE Stem cell markers, OCT3/4, and more recently SOX2 and growth differentiation factor 3 (GDF3), have been reported to be expressed variably in germ cell tumors. 19396148 2009
Entrez Id: 359787
Gene Symbol: DPPA3
DPPA3
0.310 PosttranslationalModification disease BEFREE Imprints and DPPA3 are bypassed during pluripotency- and differentiation-coupled methylation reprogramming in testicular germ cell tumors. 27803193 2016
Entrez Id: 359787
Gene Symbol: DPPA3
DPPA3
0.310 Biomarker disease CTD_human Retinoic acid represses a cassette of candidate pluripotency chromosome 12p genes during induced loss of human embryonal carcinoma tumorigenicity. 16168501 2005
Entrez Id: 6337
Gene Symbol: SCNN1A
SCNN1A
0.300 Biomarker disease CTD_human Retinoic acid represses a cassette of candidate pluripotency chromosome 12p genes during induced loss of human embryonal carcinoma tumorigenicity. 16168501 2005
Entrez Id: 55729
Gene Symbol: ATF7IP
ATF7IP
0.300 Biomarker disease CTD_human Variants near DMRT1, TERT and ATF7IP are associated with testicular germ cell cancer. 20543847 2010
Entrez Id: 2072
Gene Symbol: ERCC4
ERCC4
0.300 Biomarker disease CTD_human ERCC1 and XPF expression in human testicular germ cell tumors. 19956886 2010
Entrez Id: 6515
Gene Symbol: SLC2A3
SLC2A3
0.300 Biomarker disease CTD_human Retinoic acid represses a cassette of candidate pluripotency chromosome 12p genes during induced loss of human embryonal carcinoma tumorigenicity. 16168501 2005
Entrez Id: 2067
Gene Symbol: ERCC1
ERCC1
0.300 Biomarker disease CTD_human ERCC1 and XPF expression in human testicular germ cell tumors. 19956886 2010
Entrez Id: 928
Gene Symbol: CD9
CD9
0.300 Biomarker disease CTD_human Retinoic acid represses a cassette of candidate pluripotency chromosome 12p genes during induced loss of human embryonal carcinoma tumorigenicity. 16168501 2005
Entrez Id: 1911
Gene Symbol: PHC1
PHC1
0.300 Biomarker disease CTD_human Retinoic acid represses a cassette of candidate pluripotency chromosome 12p genes during induced loss of human embryonal carcinoma tumorigenicity. 16168501 2005
Entrez Id: 9319
Gene Symbol: TRIP13
TRIP13
0.300 Biomarker disease CTD_human Biallelic TRIP13 mutations predispose to Wilms tumor and chromosome missegregation. 28553959 2017
Entrez Id: 701
Gene Symbol: BUB1B
BUB1B
0.300 Biomarker disease CTD_human Biallelic TRIP13 mutations predispose to Wilms tumor and chromosome missegregation. 28553959 2017
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 AlteredExpression disease BEFREE Overexpression of p53 was not observed in all of the 22 ovarian germ cell tumors; only 3 were found to have nuclear staining in a small fraction of the malignant cells (< 5% in 1 immature teratoma, 5-10% in 2 yolk-sac tumors). 8625105 1995
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation disease BEFREE Using polymerase chain reaction-single-strand conformation polymorphism (PCR-SSCP) analysis, p53 gene mutation was examined in 12 intracranial germ cell tumors (5 yolk sac carcinomas and 7 germinomas), many of which were derived from young patients in the first to the second decade. 7622420 1995
Entrez Id: 645682
Gene Symbol: POU5F1P4
POU5F1P4
0.100 Biomarker disease BEFREE The abundance of factors associated with pluripotency (NANOG and OCT-3/4) and undifferentiated state (AP-2gamma) may explain the remarkable pluripotency of germ cell neoplasms, which are capable of differentiating to various somatic tissue components of teratomas. 16540528 2006
Entrez Id: 642559
Gene Symbol: POU5F1P3
POU5F1P3
0.100 Biomarker disease BEFREE TSPY protein localized with established germ cell tumor markers, such as the placental alkaline phosphatase, c-KIT, and OCT3/4, in the same tumor cells of both gonadoblastoma and adjacent carcinoma in situ, the precursor for germ cell tumors. 17349529 2007
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.100 GeneticVariation disease BEFREE An activating point mutation of the c-KIT tyrosine kinase receptor gene, D816H, has been described in germ cell tumors (GCTs). 27781377 2017
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.100 Biomarker disease BEFREE Chromosome 12-containing markers, including two dicentrics, in three i(12p)-negative testicular germ cell tumors. 7685624 1993
Entrez Id: 645682
Gene Symbol: POU5F1P4
POU5F1P4
0.100 AlteredExpression disease BEFREE In recent years, many researches have shown that OCT4 is overexpressed in both germ cell tumors and somatic cancers. 26152287 2015
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.100 Biomarker disease BEFREE Together with the previous reports on the presence of i(12p) in seminoma and teratoma of the testis, our findings suggest that this karyotypic abnormality is characteristic for all histologic varieties of germ cell tumors of the testis. 3002602 1986
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.100 Biomarker disease BEFREE In one case, two copies of the germ cell tumor marker i(12p) were found. 2331686 1990