Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.100 Biomarker disease BEFREE Cytogenetic analysis of germ cell tumors (GCTs) has identified i(12p) as a specific cytogenetic abnormality identified in more than 80% of GCTs, present in all histologies, in primary and metastatic lesions, in testicular and extragonadal presentations, and in ovarian and sex cord stromal tumors. 1663944 1991
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.100 Biomarker disease BEFREE The i(12p) chromosome marker has been shown to be a diagnostic and prognostic marker of human male germ cell tumors (GCTs). 1683567 1991
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.100 Biomarker disease BEFREE Clonal relationship between the teratoma and rhabdomyosarcoma of the germ cell tumor was established by the presence in both of i(12p), the characteristic marker of germ cell tumors. 1676906 1991
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.040 GeneticVariation disease BEFREE In comparison with normal DNA, tumour DNA of a total of eight patients (seven with germ cell neoplasm and one with testicular lymphoma) showed increased dosages of KRAS2, PDGFA, EGFR, MET and PDGFB. 1829952 1991
Entrez Id: 2249
Gene Symbol: FGF4
FGF4
0.030 AlteredExpression disease BEFREE There were significant differences in oncogene expression between seminomas and nonseminomas with c-kit being expressed in 24 of 30 (80%) seminomas but in only 3 of 40 (7%) nonseminomatous tumors (P = 0.0001, chi 2 test) and hst-1 being expressed in 24 of 38 (63%) nonseminomas but only 1 of 24 (4%) of seminomas (P = 0.0001, chi 2 test), demonstrating an inverse relationship in the expression pattern of these 2 oncogenes in human testicular germ cell tumors. 1706218 1991
Entrez Id: 3265
Gene Symbol: HRAS
HRAS
0.020 GeneticVariation disease BEFREE In comparison with normal DNA, tumour DNA of a total of eight patients (seven with germ cell neoplasm and one with testicular lymphoma) showed increased dosages of KRAS2, PDGFA, EGFR, MET and PDGFB. 1829952 1991
Entrez Id: 2248
Gene Symbol: FGF3
FGF3
0.010 AlteredExpression disease BEFREE No gross alterations in the c-kit, hst-1, and int-2 loci were found at the DNA level and no int-2 mRNA expression was detected in any of the germ cell tumors examined. 1706218 1991
Entrez Id: 57508
Gene Symbol: INTS2
INTS2
0.010 AlteredExpression disease BEFREE No gross alterations in the c-kit, hst-1, and int-2 loci were found at the DNA level and no int-2 mRNA expression was detected in any of the germ cell tumors examined. 1706218 1991
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.100 Biomarker disease BEFREE A diverse group of gonadal and extragonadal human germ cell tumors (GCT) and GCT-derived cell lines was examined for the presence of an i(12p) marker chromosome and/or other abnormalities involving chromosome 12, especially 12p, by bicolor double fluorescence in situ hybridization (FISH). 1330288 1992
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.100 Biomarker disease BEFREE The i(12p) marker chromosome has been found to be a highly nonrandom chromosome abnormality associated with germ cell tumors (GCTs). 1384658 1992
Entrez Id: 27306
Gene Symbol: HPGDS
HPGDS
0.010 AlteredExpression disease BEFREE Since all three glutathione S-transferase isoenzyme classes contribute to the resistance to antineoplastic drugs, the altered glutathione S-transferase isoenzyme pattern and the decrease of glutathione S-transferase activity may play a role in the high inherent drug sensitivity of human testicular germ cell tumors. 1314914 1992
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.100 Biomarker disease BEFREE Chromosome 12-containing markers, including two dicentrics, in three i(12p)-negative testicular germ cell tumors. 7685624 1993
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.100 Biomarker disease BEFREE Uniparental origin of i(12p) in human germ cell tumors. 7682101 1993
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.100 Biomarker disease BEFREE Molecular cytogenetic analysis of i(12p)-negative human male germ cell tumors. 7512366 1993
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.100 Biomarker disease BEFREE Overrepresentation of chromosome 12p sequences and karyotypic evolution in i(12p)-negative testicular germ-cell tumors revealed by fluorescence in situ hybridization. 8242603 1993
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 AlteredExpression disease BEFREE The P53 tumor suppressor gene protein is expressed to some degree in most testicular germ cell tumors and degree of staining/expression varies according to stage of disease. 8015085 1994
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.100 Biomarker disease BEFREE Acute myeloid leukaemia with +i(12p) shortly after treatment of mediastinal germ cell tumour. 7803244 1994
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.100 Biomarker disease BEFREE This cell line may be useful in studying the relationship between i(12p) and hematological differentiation of human mediastinal germ cell tumors. 8069867 1994
Entrez Id: 28471
Gene Symbol: IGHV1-12
IGHV1-12
0.100 Biomarker disease BEFREE i(12p) is a highly nonrandom chromosomal marker seen in about 80% of male germ cell tumors with evaluable cytogenetic abnormalities. 8308927 1994
Entrez Id: 3481
Gene Symbol: IGF2
IGF2
0.060 AlteredExpression disease BEFREE Because testicular germ cell tumors of adults originate from an early germ cell and, to a certain extent, mimic normal embryonal development, we investigated the patterns of allelic expression of the H19 and IGF2 genes in these tumors to determine if genomic imprinting, or a disturbance of it, is involved in their pathogenesis. 8021956 1994
Entrez Id: 283120
Gene Symbol: H19
H19
0.030 GeneticVariation disease BEFREE Analysis of the products of RT-PCR showed biallelic expression of the H19 gene in 12 testicular germ cell tumors (patients numbered 6, 8-13, 15, 16, and 18-20) and of the IGF2 gene in 10 testicular germ cell tumors (patients numbered 1, 3, 6, 8-13, and 15-20). 8021956 1994
Entrez Id: 5111
Gene Symbol: PCNA
PCNA
0.020 AlteredExpression disease BEFREE Proliferating cell nuclear antigen expression to predict occult disease in clinical stage I nonseminomatous testicular germ cell tumors. 7915335 1994
Entrez Id: 7490
Gene Symbol: WT1
WT1
0.020 Biomarker disease BEFREE We suggest that loss of genetic information from the short arm of chromosome 11, without affecting the WT1 gene in the regions studied, is relatively frequent but not crucial in the pathogenesis of testicular germ cell tumors of adults. 7515656 1994
Entrez Id: 1630
Gene Symbol: DCC
DCC
0.010 GeneticVariation disease BEFREE By allelotype analysis using the DCC-flanking polymorphic marker D18S5 we have previously shown that allelic deletions at 18q21 occur in 40% of male germ cell tumors (Murty et al., 1994). 7936646 1994
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 AlteredExpression disease BEFREE Overexpression of p53 was not observed in all of the 22 ovarian germ cell tumors; only 3 were found to have nuclear staining in a small fraction of the malignant cells (< 5% in 1 immature teratoma, 5-10% in 2 yolk-sac tumors). 8625105 1995