Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 51573
Gene Symbol: GDE1
GDE1
0.010 AlteredExpression disease BEFREE In patients with MDR TB, miR-155 was lower as compared to healthy controls and TB treated group but higher as compared to TB naïve patients. miR-16 levels were lowest in serum of MDR TB patients compared to TB naïve, TB treated group and healthy controls. 28061948 2017
Entrez Id: 9518
Gene Symbol: GDF15
GDF15
0.010 Biomarker disease BEFREE Delamanid (DLM), a nitro-dihydro-imidazooxazole, is a new, well-tolerated anti-TB drug with a low MIC (1 to 12 ng/ml) against <i>Mycobacterium tuberculosis</i> It is used for the treatment of pulmonary MDR-TB, but pharmacokinetic (PK) data for DLM in the central nervous system (CNS) of patients with TBM are not available. 31383662 2019
Entrez Id: 2768
Gene Symbol: GNA12
GNA12
0.020 Biomarker disease BEFREE What happened to patients with RMP-resistant/MDR-TB in Zambia reported as lost to follow-up from 2011 to 2014? 28786797 2017
Entrez Id: 2768
Gene Symbol: GNA12
GNA12
0.020 Biomarker disease BEFREE Our data indicated that DNA sequencing of specific codons of the rpoB gene should be effective for predicting RMP resistance and MDR-TB in rural China. 20074413 2010
Entrez Id: 10578
Gene Symbol: GNLY
GNLY
0.010 Biomarker disease BEFREE The review also provides recent advances of the precise studies of induction of immunity including CD8 positive cytotoxic T cells and effector molecules such as granulysin by these vaccines, against multi-drug resistant tuberculosis and extremely drug resistant tuberculosis. 20372079 2010
Entrez Id: 9200
Gene Symbol: HACD1
HACD1
0.010 GeneticVariation disease BEFREE Drug susceptibility testing for second line drugs showed that among the 90 MDR strains, 22.2% (20/90) were resistant to OFX, 2.22% (2/90) to KAN, 3.33% (3/90) to AMK and 1.11% (1/90) to CAP. 29486710 2018
Entrez Id: 3082
Gene Symbol: HGF
HGF
0.010 Biomarker disease BEFREE Thus, treatment of MDR-TB with very high doses of primary antibiotics particularly administrated by aerial route can produce a very good therapeutic effect, and its hepatic toxicity can be prevented by the administration of HGF, becoming in a new treatment modality for MDR-TB. 31283037 2020
Entrez Id: 3105
Gene Symbol: HLA-A
HLA-A
0.010 GeneticVariation disease BEFREE We determined the high-resolution allele and haplotype frequencies at the human leucocyte antigen (HLA)A, B and DRB1 loci in the Han population of Hubei province, the TB endemic area of Central China, with pulmonary tuberculosis (PTB), and established the relationship between HLA-A, B and DRB1 alleles as well as haplotypes and susceptibility to multidrug-resistant and rifampicin-resistant tuberculosis (MDR/RR-TB). 29219243 2018
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.020 GeneticVariation disease BEFREE Multivariate analysis identified poor past compliance to treatment (odds ratio, OR=6.6; 95% confidence interval, CI [2.0-21.5]), higher number of cavities (OR=6; 95% CI [2.1-17.3]) in chest radiographs and the presence of the HLA-DRB1*14 allele (OR=8.2; 95% CI [2.1-31.3]) as independent predictors of MDR-TB. 14522182 2003
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.020 Biomarker disease BEFREE While in the subgroup of new TB cases, DRB1*08:01 (p < .0001; OR = 80.3, 95% CI 7.0-917.1) and older age (p < .0001; OR = 3.9, 95% CI 2.4-6.4) were independent susceptibility factors for primary MDR/RR-TB. 29219243 2018
Entrez Id: 3351
Gene Symbol: HTR1B
HTR1B
0.010 Biomarker disease BEFREE Numerous studies report that mutations of rpsL (encoding the S12 protein), rrs (encoding 16S rRNA) and gidB (encoding rRNA methyltransferase) are responsible for conferring resistance to streptomycin (STR), which is usually used in both multidrug-resistant tuberculosis (MDR-TB) treatments and re-treatments in Myanmar. 30029920 2018
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.020 Biomarker disease BEFREE We evaluated the IFN-γ circuit by studying IFN-γ production after mycobacterial challenge as well as IL-12Rβ1 expression and STAT4 phosphorylation in response to IL-12p70 stimulation in whole blood of a 6-year-old Peruvian girl with disseminated recurrent mycobacterial infection diagnosed as multidrug-resistant tuberculosis. 30039354 2018
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.020 AlteredExpression disease BEFREE IL-23 plays an ambiguous role in T helper type 1 (Th1) and Th17 profiles: alone, IL-23 is responsible for M. tuberculosis-induced IL-17 and IFN-γ expression in CD4<sup>+</sup> T cells from PPD<sup>+</sup> HD whereas, together with transforming growth factor (TGF-β), it promotes IL-17<sup>+</sup> IFN-γ<sup>-</sup> expansion in MDR-TB. 27681197 2017
Entrez Id: 3594
Gene Symbol: IL12RB1
IL12RB1
0.010 AlteredExpression disease BEFREE We evaluated the IFN-γ circuit by studying IFN-γ production after mycobacterial challenge as well as IL-12Rβ1 expression and STAT4 phosphorylation in response to IL-12p70 stimulation in whole blood of a 6-year-old Peruvian girl with disseminated recurrent mycobacterial infection diagnosed as multidrug-resistant tuberculosis. 30039354 2018
Entrez Id: 3605
Gene Symbol: IL17A
IL17A
0.010 Biomarker disease BEFREE The present findings deepen our understanding of the role of IL-17 in MDR-TB and highlight the influence of the genetic background of the infecting M. tuberculosis strain on the ex-vivo Th17 response. 27681197 2017
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.010 Biomarker disease BEFREE Our results show that IL-1β and IL-6 are crucial for the H37Rv and M-induced expansion of IL-17<sup>+</sup> interferon (IFN)-γ<sup>-</sup> and IL-17<sup>+</sup> IFN-γ<sup>+</sup> in CD4<sup>+</sup> T cells from MDR-TB and PPD<sup>+</sup> HD. 27681197 2017
Entrez Id: 51561
Gene Symbol: IL23A
IL23A
0.010 AlteredExpression disease BEFREE IL-23 plays an ambiguous role in T helper type 1 (Th1) and Th17 profiles: alone, IL-23 is responsible for M. tuberculosis-induced IL-17 and IFN-γ expression in CD4<sup>+</sup> T cells from PPD<sup>+</sup> HD whereas, together with transforming growth factor (TGF-β), it promotes IL-17<sup>+</sup> IFN-γ<sup>-</sup> expansion in MDR-TB. 27681197 2017
Entrez Id: 3565
Gene Symbol: IL4
IL4
0.010 AlteredExpression disease BEFREE Our results demonstrated that strain M was a weaker gamma interferon (IFN-gamma) inducer than H37Rv for group N. Strain M induced the highest interleukin-4 expression in CD4+ and CD8+ T cells from MDR- and S-TB patients, along with the lowest cytotoxic T-lymphocyte (CTL) activity in patients and controls. 19720756 2009
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.010 Biomarker disease BEFREE Our results show that IL-1β and IL-6 are crucial for the H37Rv and M-induced expansion of IL-17<sup>+</sup> interferon (IFN)-γ<sup>-</sup> and IL-17<sup>+</sup> IFN-γ<sup>+</sup> in CD4<sup>+</sup> T cells from MDR-TB and PPD<sup>+</sup> HD. 27681197 2017
Entrez Id: 3623
Gene Symbol: INHA
INHA
0.050 GeneticVariation disease BEFREE Data from the Western Cape revealed that significantly more XDR-TB isolates showed mutations in the inhA promoter than in katG (85.5% vs. 60.9%, P < 0.01), while the respective proportions were equal for INH-resistant non-MDR-TB isolates (∼30%). 21333101 2011
Entrez Id: 3623
Gene Symbol: INHA
INHA
0.050 PosttranslationalModification disease BEFREE Sequencing analysis was performed of the rpoB rifampicin resistance-determining region and the katG gene, the oxyR-ahpC intergenic region, and the inhA promoter region in 259 MDR M. tuberculosis isolates, in 51 isoniazid-resistant isolates, and in 13 rifampicin-resistant isolates. 21617314 2011
Entrez Id: 3623
Gene Symbol: INHA
INHA
0.050 GeneticVariation disease BEFREE The objectives of the study were to compare the performance of line probe assay (GenoType MTBDRplus) with solid culture method for an early diagnosis of multidrug resistant tuberculosis (MDR-TB), and to study the mutation patterns associated with rpoB, katG and inhA genes at a tertiary care centre in north India. 24039735 2013
Entrez Id: 3623
Gene Symbol: INHA
INHA
0.050 Biomarker disease BEFREE Mutations in katG, rpoB (or both) and the inhA promoter showed a sensitivity of 75.6% and specificity of 97.0% for detection of MDR-TB. 30926465 2019
Entrez Id: 3623
Gene Symbol: INHA
INHA
0.050 GeneticVariation disease BEFREE In brief, the results showed that the REBA MTB-MDR assay efficiently recognized nucleotide changes in the oxyR-ahpC intergenic region as well as those in rpoB, katG and the inhA promoter region with higher sensitivity, resulting in an 81.0 % detection rate for isoniazid resistance. 21596910 2011
Entrez Id: 4012
Gene Symbol: LNPEP
LNPEP
0.010 GeneticVariation disease BEFREE Drug susceptibility testing for second line drugs showed that among the 90 MDR strains, 22.2% (20/90) were resistant to OFX, 2.22% (2/90) to KAN, 3.33% (3/90) to AMK and 1.11% (1/90) to CAP. 29486710 2018