Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 29115
Gene Symbol: SAP30BP
SAP30BP
0.100 GeneticVariation disease GWASCAT Genome-wide association study for rotator cuff tears identifies two significant single-nucleotide polymorphisms. 26350878 2016
Entrez Id: 23328
Gene Symbol: SASH1
SASH1
0.100 GeneticVariation disease GWASCAT Genome-wide association study for rotator cuff tears identifies two significant single-nucleotide polymorphisms. 26350878 2016
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.040 AlteredExpression disease BEFREE The rotator cuff was harvested from the sham and RCT groups on various days for reverse transcription-polymerase chain reaction analysis of Tnfa, Ngf, Il1b, and Cox2 expression. 30146165 2019
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.040 AlteredExpression disease BEFREE IL-1β levels in shoulder synovial fluid correlated positively with shoulder pain and functional scores in patients with chronic RCTs. 29169956 2018
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.040 GeneticVariation disease BEFREE For the in vitro study, tenocytes were enzymatically isolated and cultured from patients with rotator cuff tear and treated with or without interleukin 1β (IL-1β) and PRP. 30311796 2018
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.040 GeneticVariation disease BEFREE To assess the effects of PRP on tenocytes from degenerative rotator cuff tears with the concomitant use of a corticosteroid in interleukin 1β (IL-1β)-induced tendinopathic conditions. 28061032 2017
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.030 GeneticVariation disease BEFREE We observed that carriers of the rare allele of both studied variants of TGFB1, as well as their G/A (rs1800470/rs1800469) haplotype, were less susceptible to RCT (p < 0.05). 31444797 2020
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.030 Biomarker disease BEFREE Our findings show differential expression of matrix extracellular genes and TGFB family members in the degeneration process involved in rotator cuff tears. 29614203 2018
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.030 Biomarker disease BEFREE The present study aimed to enhance the healing of the tendon‑bone interface following rotator‑cuff tear repair by the interposition of hydroxyapatite (HA) encapsulated with transforming growth factor β1 (TGFβ1). 29393349 2018
Entrez Id: 1289
Gene Symbol: COL5A1
COL5A1
0.020 GeneticVariation disease BEFREE In males, the A allele of COL5A1 rs3196378 (p = 0.032) and the G allele of TGFBR1 rs1590 (p = 0.039) were independent risk factors for RCT. 31444797 2020
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.020 AlteredExpression disease BEFREE VEGFA promotes tendon-bone healing of RCT via inhibiting microRNA-205-5p expression. 31173277 2019
Entrez Id: 6503
Gene Symbol: SLA
SLA
0.020 Biomarker disease BEFREE Twelve were rotator cuff tears (6 PASTA lesions, 3 partial supscapularis tears, 2 bursal supraspinatus tears and 1 full-thickness supraspinatus tear), 16 were labral tears (9 anterior, 1 posteroinferior and 6 SLAP). 30097689 2019
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.020 GeneticVariation disease BEFREE In conclusion, a significant correlation was identified between the MMP-1 rs1799750 polymorphism and RCT. 31652448 2019
Entrez Id: 2167
Gene Symbol: FABP4
FABP4
0.020 AlteredExpression disease BEFREE In the rat model, the mRNA and protein expressions of FABP4 and HIF1α were significantly increased by the RCT as compared with the control. 31518157 2019
Entrez Id: 3091
Gene Symbol: HIF1A
HIF1A
0.020 AlteredExpression disease BEFREE In the rat model, the mRNA and protein expressions of FABP4 and HIF1α were significantly increased by the RCT as compared with the control. 31518157 2019
Entrez Id: 7871
Gene Symbol: SLMAP
SLMAP
0.020 Biomarker disease BEFREE Twelve were rotator cuff tears (6 PASTA lesions, 3 partial supscapularis tears, 2 bursal supraspinatus tears and 1 full-thickness supraspinatus tear), 16 were labral tears (9 anterior, 1 posteroinferior and 6 SLAP). 30097689 2019
Entrez Id: 6503
Gene Symbol: SLA
SLA
0.020 Biomarker disease BEFREE Comparisons were made between the histologic findings present in the setting of a rotator cuff tear with those seen in the setting of a SLAP tear. 29362860 2018
Entrez Id: 1289
Gene Symbol: COL5A1
COL5A1
0.020 Biomarker disease BEFREE Genetics of rotator cuff tears: no association of col5a1 gene in a case-control study. 30572822 2018
Entrez Id: 5156
Gene Symbol: PDGFRA
PDGFRA
0.020 Biomarker disease BEFREE PDGFRβ<sup>+</sup> PDGFRα<sup>+</sup> cells directly contribute to fibrosis and fatty degeneration after massive rotator cuff tears in the mouse model. 29653843 2018
Entrez Id: 7871
Gene Symbol: SLMAP
SLMAP
0.020 Biomarker disease BEFREE Comparisons were made between the histologic findings present in the setting of a rotator cuff tear with those seen in the setting of a SLAP tear. 29362860 2018
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.020 GeneticVariation disease BEFREE (2) Are there haplotypes of MMP-1 and MMP-3 correlated with rotator cuff tears? 28160256 2017
Entrez Id: 3091
Gene Symbol: HIF1A
HIF1A
0.020 Biomarker disease BEFREE FABP4 transcription is regulated by the direct binding of HIF1 to the FABP4 promoter in the hypoxic condition induced by RCT. 28382782 2017
Entrez Id: 4314
Gene Symbol: MMP3
MMP3
0.020 Biomarker disease BEFREE (2) Are there haplotypes of MMP-1 and MMP-3 correlated with rotator cuff tears? 28160256 2017
Entrez Id: 5156
Gene Symbol: PDGFRA
PDGFRA
0.020 Biomarker disease BEFREE Taken together, the present study presents a reliable fatty infiltration mouse model and suggests a key role for PDGFRα-positive mesenchymal stem cells in the process of fatty infiltration after RCT in humans. 28139720 2017
Entrez Id: 2167
Gene Symbol: FABP4
FABP4
0.020 Biomarker disease BEFREE To investigate potential mechanisms for fatty infiltration other than adipogenic differentiation of muscle stem cells, we examined the role of FABP4 in muscle fatty infiltration in an RCT mouse model. 28382782 2017