Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5538
Gene Symbol: PPT1
PPT1
0.600 Biomarker disease GENOMICS_ENGLAND
Entrez Id: 1201
Gene Symbol: CLN3
CLN3
0.300 Biomarker disease CTD_human
Entrez Id: 5538
Gene Symbol: PPT1
PPT1
0.600 GeneticVariation disease BEFREE CLN1 disease (MIM#256730) is caused by mutations in the CLN1 gene, which encodes palmitoyl protein thioesterase 1 (PPT1). 25865307 2015
Entrez Id: 9374
Gene Symbol: PPT2
PPT2
0.020 Biomarker disease BEFREE PPT2 is located in the human major histocompatibility class III locus on chromosome 6p21.3, a position that rules out PPT2 as the causative gene in any of the NCLs at defined chromosomal loci. 10051407 1999
Entrez Id: 5538
Gene Symbol: PPT1
PPT1
0.600 AlteredExpression disease BEFREE PPT1 enzyme activity was normalized in peripheral leukocytes, but remained low in the CSF and resulted only in a mild and transient amelioration of the classic INCL. 11673581 2001
Entrez Id: 5538
Gene Symbol: PPT1
PPT1
0.600 Biomarker disease BEFREE Palmitoyl-protein thioesterase-1 (PPT1) deficiency causes infantile neuronal ceroid lipofuscinosis (INCL), a devastating childhood neurodegenerative storage disorder. 18948101 2008
Entrez Id: 5538
Gene Symbol: PPT1
PPT1
0.600 Biomarker disease BEFREE Ppt1 function is well conserved from humans to flies; thus the INCL pathologies may be due, in part, to the accumulation of various embryonic neural defects similar to that of Drosophila. 21203506 2010
Entrez Id: 5538
Gene Symbol: PPT1
PPT1
0.600 GeneticVariation disease BEFREE PPT1 nonsense-mutations account for approximately 31% of INCL patients in the US. 21704547 2011
Entrez Id: 5538
Gene Symbol: PPT1
PPT1
0.600 Biomarker disease BEFREE CLN1, the gene for infantile NCL (Santavuori-Haltia disease) encodes palmitoyl protein thioesterase (PPT). 8803767 1996
Entrez Id: 23400
Gene Symbol: ATP13A2
ATP13A2
0.300 Biomarker disease CTD_human A one base pair deletion in the canine ATP13A2 gene causes exon skipping and late-onset neuronal ceroid lipofuscinosis in the Tibetan terrier. 22022275 2011
Entrez Id: 54982
Gene Symbol: CLN6
CLN6
0.310 Biomarker disease CTD_human Altered biometal homeostasis is associated with CLN6 mRNA loss in mouse neuronal ceroid lipofuscinosis. 23789114 2013
Entrez Id: 2670
Gene Symbol: GFAP
GFAP
0.010 Biomarker disease BEFREE Although the clinical and pathological features of the GFAP(-/-)Vimentin(-/-)PPT1(-/-) mice are similar to INCL, the disease appears earlier and progresses more rapidly. 22031903 2011
Entrez Id: 7431
Gene Symbol: VIM
VIM
0.010 Biomarker disease BEFREE Although the clinical and pathological features of the GFAP(-/-)Vimentin(-/-)PPT1(-/-) mice are similar to INCL, the disease appears earlier and progresses more rapidly. 22031903 2011
Entrez Id: 5538
Gene Symbol: PPT1
PPT1
0.600 Biomarker disease MGD Although the clinical and pathological features of the GFAP(-/-)Vimentin(-/-)PPT1(-/-) mice are similar to INCL, the disease appears earlier and progresses more rapidly. 22031903 2011
Entrez Id: 5538
Gene Symbol: PPT1
PPT1
0.600 Biomarker disease BEFREE Although the clinical and pathological features of the GFAP(-/-)Vimentin(-/-)PPT1(-/-) mice are similar to INCL, the disease appears earlier and progresses more rapidly. 22031903 2011
Entrez Id: 1200
Gene Symbol: TPP1
TPP1
0.330 Biomarker disease CTD_human Aminoglycoside-mediated suppression of nonsense mutations in late infantile neuronal ceroid lipofuscinosis. 11589009 2001
Entrez Id: 6342
Gene Symbol: SCP2
SCP2
0.010 Biomarker disease BEFREE Assignment of sterol carrier protein X/sterol carrier protein 2 to 1p32 and its exclusion as the causative gene for infantile neuronal ceroid lipofuscinosis. 8004106 1994
Entrez Id: 23400
Gene Symbol: ATP13A2
ATP13A2
0.300 Biomarker disease CTD_human Characterization of cellular protective effects of ATP13A2/PARK9 expression and alterations resulting from pathogenic mutants. 22847264 2012
Entrez Id: 5538
Gene Symbol: PPT1
PPT1
0.600 Biomarker disease BEFREE Early intervention with cellular transplants of hCNS-SCns into the brains of INCL patients may supply a continuous and long-lasting source of the missing PPT1 and provide some therapeutic benefit through protection of endogenous neurons. 19733542 2009
Entrez Id: 4610
Gene Symbol: MYCL
MYCL
0.010 Biomarker disease BEFREE Here we demonstrate a linkage disequilibrium of CLN1 chromosomes using the two closest markers, DIS62 and L-MYC at the short arm of chromosome 1 (P less than 0.0025). 2071142 1991
Entrez Id: 837
Gene Symbol: CASP4
CASP4
0.010 AlteredExpression disease BEFREE Here we report that in the human INCL brain ER stress-induced activation of unfolded protein response (UPR) mediates caspase-4 and caspase-3 activation and apoptosis. 16644870 2006
Entrez Id: 836
Gene Symbol: CASP3
CASP3
0.010 Biomarker disease BEFREE Here we report that in the human INCL brain ER stress-induced activation of unfolded protein response (UPR) mediates caspase-4 and caspase-3 activation and apoptosis. 16644870 2006
Entrez Id: 5538
Gene Symbol: PPT1
PPT1
0.600 GeneticVariation disease BEFREE Here, we provide the initial characterization of the novel Cln1(R151X) mouse model of infantile neuronal ceroid lipofuscinosis that we have generated. 25205113 2015
Entrez Id: 5538
Gene Symbol: PPT1
PPT1
0.600 Biomarker disease MGD Here, we provide the initial characterization of the novel Cln1(R151X) mouse model of infantile neuronal ceroid lipofuscinosis that we have generated. 25205113 2015
Entrez Id: 6863
Gene Symbol: TAC1
TAC1
0.040 GeneticVariation disease BEFREE In a pregnancy at risk for INCL, chorionic villi (CV) were studied using a novel fluorometric PPT enzyme assay in combination with mutation-analysis of the CLN1 gene. 10416973 1999