Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.300 SomaticCausalMutation disease ORPHANET Detection of new PTEN/MMAC1 mutations in head and neck squamous cell carcinomas with loss of chromosome 10. 11801303 2002
Entrez Id: 3621
Gene Symbol: ING1
ING1
0.300 SomaticCausalMutation disease ORPHANET Genomic structure of the human ING1 gene and tumor-specific mutations detected in head and neck squamous cell carcinomas. 10866301 2000
Entrez Id: 8795
Gene Symbol: TNFRSF10B
TNFRSF10B
0.300 SusceptibilityMutation disease ORPHANET Causes of death in a cohort of 260 plutonium workers. 9721831 1998
Entrez Id: 545
Gene Symbol: ATR
ATR
0.300 CausalMutation disease CGI
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 Biomarker disease BEFREE The most widely applied algorithm for human papillomavirus (HPV) detection in formalin-fixed paraffin-embedded (FFPE) specimen of oropharyngeal squamous cell carcinoma (OPSCC) consists of p16INK4A (p16) immunostaining followed by PCR-based detection of high-risk HPV DNA on the p16-immunopositive samples. 31837430 2020
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 Biomarker disease BEFREE We aimed to compare different HPV-detection methods against the test used in clinical practice, ie, p16 immunohistochemistry (IHC) and to evaluate whether another HPV-detection test additional to p16 IHC would be worthwhile in OPSCC specimens. 31121191 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 AlteredExpression disease BEFREE Expression of EMT markers, such as Twist and Snail/Slug, is related to p16 expression in OPSCC. 31704861 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 AlteredExpression disease BEFREE Prognostic impact of p16 and PD-L1 expression in patients with oropharyngeal squamous cell carcinoma receiving a definitive treatment. 31113825 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 Biomarker disease BEFREE The tumor was from a 48 year old non-smoking man with non-keratinizing, p16 positive tonsil OSCC, stage T2N0M0 with HPV16. 30909875 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 Biomarker disease BEFREE Patients with gray zone squamous cell carcinomas were compared with patients with oral cavity squamous cell carcinoma (OSCC) or oropharyngeal squamous cell carcinoma (OPSCC) and stratified by human papillomavirus (HPV) status that was determined by p16 immunostaining or HPV serology. 31282843 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 Biomarker disease BEFREE We investigated the association between HPV and p16 status and previous results of cervical examinations, including cytological and histological tests, in females with OPSCC. 30626248 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 Biomarker disease BEFREE Predictive value of computed tomography in identifying extracapsular spread of cervical lymph node metastases in p16 positive oropharyngeal squamous cell carcinoma. 30973213 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 Biomarker disease BEFREE Risk profiling based on p16 and HPV DNA more accurately predicts location of disease relapse in patients with oropharyngeal squamous cell carcinoma. 30657857 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 AlteredExpression disease BEFREE Biopsy specimens obtained from 75 patients with OPSCC were stained for p16 and COX2 expression immunohistochemically. 31570459 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 Biomarker disease BEFREE While widely used, p16 immunohistochemistry is both a sensitive and a specific surrogate marker for oncogenic HPV infection in OPSCC, but not in OSCC. 30238467 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 Biomarker disease BEFREE To evaluate the impact of tobacco smoking on survival for cases with OPSCC with known HPV- and p16INK4A(p16)-status. 31384393 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 Biomarker disease BEFREE We retrospectively examined survival of 107 patients with locally advanced OPSCC after radiotherapy alone (n = 43) or chemoradiotherapy (n = 64) with respect to tumor p16 and HPV DNA status, using Cox's proportional hazard model. 30694402 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 Biomarker disease BEFREE To analyze the impact of tumor p16 status and other clinical factors on the therapeutic decision-making process in patients with oropharyngeal squamous cell carcinoma (OPSCC). 29871820 2018
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 AlteredExpression disease BEFREE Interestingly, in this case, we observed that non-tumor tonsillar crypts adjacent to HPV-positive OPSCC appeared normal under a microscope; however, this tissue also showed weak p16 expression. 29936930 2018
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 Biomarker disease BEFREE The incidence of oropharyngeal squamous cell carcinoma (OPSCC) has been rising in Western countries and this has been attributed to human papillomavirus (HPV) infection. p16 expression is a marker for HPV infection and p16 positive OPSCC is now recognized as a separate disease entity. 29942347 2018
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 Biomarker disease BEFREE However, variable clinical outcomes are observed among patients with p16 positive oropharyngeal squamous cell carcinoma, which is a surrogate marker of HPV infection. 29925856 2018
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 Biomarker disease BEFREE To examine combined immunoprofiles of epidermal growth factor receptor (EGFR), CD44, and p16 in oropharyngeal squamous cell carcinoma (OPSCC) and to correlate them with radiotherapy treatment outcomes and clinicopathological parameters. 30079604 2018
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 Biomarker disease BEFREE PD-L1 expression on tumor cells correlates with p16 status and advanced nodal status in OPSCC. 29440293 2018
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 AlteredExpression disease BEFREE In addition to tumor p16 expression, PD-L1 expression in TC and IC can be useful for predicting the response of OPSCC to radiotherapy. 30249348 2018
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.200 Biomarker disease BEFREE Cyclin-dependent kinase inhibitor 2A (p16<sup>INK4a</sup>) protein is a surrogate immunohistochemical marker of human papillomavirus infection in oropharynx squamous cell carcinoma (OPSCC). 30333880 2018