Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 90
Gene Symbol: ACVR1
ACVR1
0.300 Biomarker disease CTD_human Recurrent somatic mutations in ACVR1 in pediatric midline high-grade astrocytoma. 24705250 2014
Entrez Id: 8038
Gene Symbol: ADAM12
ADAM12
0.010 Biomarker disease BEFREE The results of immunohistochemistry are in accordance with the results obtained from the RT-PCR, which further demonstrated a mild difference concerning the mRNA concentration of ADAM 12 between similar grades of eight astrocytomas and eight oligodendrogliomas (namely four astrocytomas grade II versus four oligodendrogliomas grade II and four astrocytomas grade III versus four oligodendrogliomas grade III). 23324579 2013
Entrez Id: 8745
Gene Symbol: ADAM23
ADAM23
0.010 Biomarker disease BEFREE In this work, we have examined the expression level and the methylation status of the 5' upstream region of the adhesion molecule ADAM23 in two brain tumor cell lines (A172 and T98G) as well as in three primary brain tumors (one grade II astrocytoma and two meningiomas) and 15 glioblastoma xenografts. 15862898 2005
Entrez Id: 367
Gene Symbol: AR
AR
0.300 Biomarker disease CTD_human Expression of estrogen receptors, androgen receptor and steroid receptor coactivator-3 is negatively correlated to the differentiation of astrocytic tumors. 24680642 2014
Entrez Id: 472
Gene Symbol: ATM
ATM
0.010 AlteredExpression disease BEFREE Based on analyses of human glioblastoma multiforme (GBM) cell lines, normal astrocytes and clinical specimens from grade II astrocytomas (n=41) and grade IV GBM (n=60), we conclude that the DDR machinery is constitutively activated in gliomas, as documented by phosphorylated histone H2AX (gammaH2AX), activation of the ATM-Chk2-p53 pathway, 53BP1 foci and other markers. 20581868 2010
Entrez Id: 488
Gene Symbol: ATP2A2
ATP2A2
0.010 AlteredExpression disease BEFREE Here, we examined ATP2A2 expression in 109 human diffuse astrocytic tumor samples (39 grade II diffuse astrocytoma (DA), 19 grade III anaplastic astrocytoma (AA), 51 grade IV glioblastoma) and its correlation with patient clinicopathologic characteristics. 28339043 2017
Entrez Id: 546
Gene Symbol: ATRX
ATRX
0.010 GeneticVariation disease BEFREE Furthermore, we observed that most recurrences had a consistent IDH1 and ATRX status with their matched primary tumors and demonstrated the progressive pattern of grade II astrocytoma/oligodendroglial tumors and anaplastic oligoastrocytoma with or without IDH1-R132H. 26918938 2016
Entrez Id: 113451
Gene Symbol: AZIN2
AZIN2
0.010 Biomarker disease BEFREE Low ADC on DWI might be useful in stratifying the risk of progression in patients with grade II astrocytoma. 27858213 2017
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.010 Biomarker disease BEFREE IHC indicated that the expression of bcl-2 was inversely correlated to the grade of the tumors (i.e more cells were bcl-2 positive in LGA than in GBM) while the expression of bax was unaffected by the grade of the tumor. 11508812 2001
Entrez Id: 604
Gene Symbol: BCL6
BCL6
0.010 AlteredExpression disease BEFREE In this study we investigated Bcl-6 translocation and its transcriptional and translational levels in formalin-fixed, paraffin-embedded cerebral tissue sections from glioblastoma (GBM), low-grade glioma (Astrocytoma grade II and III), and meningioma patients, and correlated them with apoptotic processes and p53 and caspase-3 expression. 25038272 2014
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.330 GeneticVariation disease BEFREE Malignant transformation of diffuse astrocytoma to glioblastoma associated with newly developed BRAF V600E mutation. 26404554 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.330 Biomarker disease CTD_human Recurrent somatic alterations of FGFR1 and NTRK2 in pilocytic astrocytoma. 23817572 2013
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.330 GeneticVariation disease BEFREE However, the BRAF V600E mutation was detected only in epithelioid glioblastoma but not in low-grade diffuse astrocytoma. 26375727 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.330 GeneticVariation disease BEFREE Further fusions and activating mutations in BRAF were identified in 28% of grade II astrocytomas, highlighting the importance of the ERK/MAP kinase pathway in the development of paediatric low-grade gliomas. 19373855 2009
Entrez Id: 818
Gene Symbol: CAMK2G
CAMK2G
0.010 Biomarker disease BEFREE These analyses confirmed that the transcript levels of nine of the selected genes (COL4A2, FOXM1, MGP, TOP2A, CENPF, IGFBP4, VEGFA, ADD3, and CAMK2G) differed significantly in WHO grade II astrocytomas as compared to anaplastic astrocytomas and/or glioblastomas. 12937144 2003
Entrez Id: 857
Gene Symbol: CAV1
CAV1
0.010 Biomarker disease BEFREE In conclusion, the present study indicates that caveolin-1 is not useful as diagnostic marker to differentiate grade II astrocytomas from oligodendrogliomas. 19716156 2009
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.020 Biomarker disease BEFREE The analysis of multiple biopsies from the same patients revealed hypermethylation of p14ARF (5/15 cases) and p16INK4a (1/15 cases) already at the stage of low-grade diffuse astrocytoma but consistent absence of homozygous deletions. 11303791 2001
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.020 GeneticVariation disease BEFREE Deletion of CDKN2A and CDKN2B loci was found both in diffuse astrocytoma and glioblastoma component, but no other significant alterations were found. 26404554 2016
Entrez Id: 1030
Gene Symbol: CDKN2B
CDKN2B
0.010 GeneticVariation disease BEFREE Deletion of CDKN2A and CDKN2B loci was found both in diffuse astrocytoma and glioblastoma component, but no other significant alterations were found. 26404554 2016
Entrez Id: 11200
Gene Symbol: CHEK2
CHEK2
0.010 AlteredExpression disease BEFREE Based on analyses of human glioblastoma multiforme (GBM) cell lines, normal astrocytes and clinical specimens from grade II astrocytomas (n=41) and grade IV GBM (n=60), we conclude that the DDR machinery is constitutively activated in gliomas, as documented by phosphorylated histone H2AX (gammaH2AX), activation of the ATM-Chk2-p53 pathway, 53BP1 foci and other markers. 20581868 2010
Entrez Id: 4513
Gene Symbol: COX2
COX2
0.010 Biomarker disease BEFREE The aim of this study was to analyze the methylation status of four critical tumor-associated genes (MGMT, RARbeta, RASSF1A, CDH13), and investigate possible links with inflammatory (interleukin [IL]-6, IL-8) and angiogenic mediators (vascular endothelial growth factor [VEGF], cyclooxygenase [COX]-2) and clinical outcome in 23 glioma samples (6 grade II astrocytomas, 17 grade IV glioblastomas). 19809523 2010
Entrez Id: 3627
Gene Symbol: CXCL10
CXCL10
0.010 GeneticVariation disease BEFREE 50.7% of GBM and 24.5% of DA showed strong immunoexpression of CXCL10. 27461653 2017
Entrez Id: 2833
Gene Symbol: CXCR3
CXCR3
0.010 Biomarker disease BEFREE Strong CXCR3 immunoexpression was observed in 72.7% cases of GBM as compared to 31.8% cases of DA. 27461653 2017
Entrez Id: 10683
Gene Symbol: DLL3
DLL3
0.300 Biomarker disease CTD_human Inhibition of notch signaling blocks growth of glioblastoma cell lines and tumor neurospheres. 21127729 2010
Entrez Id: 1755
Gene Symbol: DMBT1
DMBT1
0.010 GeneticVariation disease BEFREE These data indicate that selective loss of the 10q25.3 region, including the DMBT1 gene, is not an initiating event in the genesis of astrocytoma grade II. 14603438 2004