Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 85416
Gene Symbol: ZIC5
ZIC5
0.010 Biomarker group BEFREE In addition, the Zic5-deficient mice exhibited malformation of neural-crest-derived facial bones, especially the mandible, which had not been observed in other Zic family mutants. 15136147 2004
Entrez Id: 7546
Gene Symbol: ZIC2
ZIC2
0.020 GeneticVariation group BEFREE In previous studies, we showed that the homozygous Zic1 null mutation (Zic1-/-) results in cerebellar malformation with severe ataxia and that holoprosencephaly and spina bifida occur in homozygotes for Zic2 knockdown mutation (Zic2kd/kd). 11699604 2001
Entrez Id: 7546
Gene Symbol: ZIC2
ZIC2
0.020 GeneticVariation group BEFREE Mutation in human ZIC2, a zinc finger protein homologous to Drosophila odd-paired, causes holoprosencephaly (HPE), which is a common, severe malformation of the brain in humans. 10677508 2000
Entrez Id: 7545
Gene Symbol: ZIC1
ZIC1
0.010 GeneticVariation group BEFREE In previous studies, we showed that the homozygous Zic1 null mutation (Zic1-/-) results in cerebellar malformation with severe ataxia and that holoprosencephaly and spina bifida occur in homozygotes for Zic2 knockdown mutation (Zic2kd/kd). 11699604 2001
Entrez Id: 55906
Gene Symbol: ZC4H2
ZC4H2
0.010 Biomarker group BEFREE The novel association of cobblestone malformation with tectocerebellar dysraphia as part of WWS is characteristic of the homozygous c.743C > del frameshift mutation in the DAG1 gene. 29337005 2018
Entrez Id: 10413
Gene Symbol: YAP1
YAP1
0.010 AlteredExpression group BEFREE Tissue specific knockout of VGLL4 in different cell lineages revealed that only loss of VGLL4 in endothelial cell lineage led to valve malformation with expanded expression of YAP targets. 30789911 2019
Entrez Id: 7490
Gene Symbol: WT1
WT1
0.020 GeneticVariation group BEFREE We describe here a novel WT1 gene mutation, i.e. a point mutation at intron 7 (+2) in both the tumor and the germline cells of a patient with Wilms' tumor and congenital male genitourinary malformation, but without renal disorder. 11518820 2001
Entrez Id: 7490
Gene Symbol: WT1
WT1
0.020 GeneticVariation group BEFREE The expression of the WT1 gene in pleural and abdominal mesothelium and the occurrence of diaphragmatic hernia in transgenic mice with a homozygous WT1 deletion strongly suggests that the diaphragmatic hernia in this patient is part of the malformation pattern caused by WT1 mutations. 7645607 1995
Entrez Id: 7476
Gene Symbol: WNT7A
WNT7A
0.010 GeneticVariation group BEFREE Complete loss of WNT7A function has been shown to cause AARRS, however, its partial loss leads to the milder malformation, Fuhrmann syndrome. 28917830 2017
Entrez Id: 89780
Gene Symbol: WNT3A
WNT3A
0.010 AlteredExpression group BEFREE It is worth noting that neurons in the ventricular zone, especially motor neurons, could not migrate laterally after the Wnt3a overexpression, which led to the malformation of motor column. 29574664 2018
Entrez Id: 7436
Gene Symbol: VLDLR
VLDLR
0.010 GeneticVariation group BEFREE Knockout (KO) mice lacking ITSN1 suffer from dispersion of pyramidal neurons and malformation of the radial glial scaffold, akin to the hippocampal lamination defects observed in VLDLR or ApoER2 mutants. 28484035 2017
Entrez Id: 9686
Gene Symbol: VGLL4
VGLL4
0.010 AlteredExpression group BEFREE Tissue specific knockout of VGLL4 in different cell lineages revealed that only loss of VGLL4 in endothelial cell lineage led to valve malformation with expanded expression of YAP targets. 30789911 2019
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.020 GeneticVariation group BEFREE We genotyped 771 CVM cases, of whom 595 had the outflow tract malformation Tetralogy of Fallot (TOF), and carried out TDT and case-control analyses using haplotype-tagging SNPs in VEGF. 19308252 2009
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.020 Biomarker group BEFREE Disturbed vascular endothelial growth factor (VEGF) production during early heart morphogenesis causes endocardial cushion malformation, which results in congenital heart disease (CHD). 16569553 2006
Entrez Id: 79805
Gene Symbol: VASH2
VASH2
0.010 Biomarker group BEFREE Microinjection of miR-181a-5p mimics and inhibitors led to abnormal expressions (20-50%) of two key target genes (pax2a and vash2) by WISH, and increased malformation percentages (18-45%) by IOD analysis. 30784759 2019
Entrez Id: 7405
Gene Symbol: UVRAG
UVRAG
0.020 GeneticVariation group BEFREE Elucidation of the p63 gene network that includes target genes and regulatory elements may reveal new genes for other malformation disorders. 20808887 2010
Entrez Id: 7405
Gene Symbol: UVRAG
UVRAG
0.020 GeneticVariation group BEFREE These results confirm that ADULT syndrome is a clinically as well as molecularly distinct member of the expanding p63 mutation family of human malformation syndromes. 11929852 2002
Entrez Id: 7295
Gene Symbol: TXN
TXN
0.010 GeneticVariation group BEFREE The incidence of malformation was higher in the diabetic group, and was significantly decreased in the TRX-Tg group (DM-WT vs DM-Tg; 28.6% vs 10.4%). 20512310 2010
Entrez Id: 10381
Gene Symbol: TUBB3
TUBB3
0.010 Biomarker group BEFREE Mutations in the neuronal ß-tubulin subunit TUBB3 result in malformation of cortical development and neuronal migration defects. 20829227 2010
Entrez Id: 347733
Gene Symbol: TUBB2B
TUBB2B
0.020 GeneticVariation group BEFREE A novel mutation in the β-tubulin gene TUBB2B associated with complex malformation of cortical development and deficits in axonal guidance. 22591407 2012
Entrez Id: 347733
Gene Symbol: TUBB2B
TUBB2B
0.020 Biomarker group BEFREE We show that loss of Tubb2a or Tubb2b does not impair survival but does lead to relatively mild cortical malformation phenotypes. 31386652 2019
Entrez Id: 7280
Gene Symbol: TUBB2A
TUBB2A
0.010 Biomarker group BEFREE We show that loss of Tubb2a or Tubb2b does not impair survival but does lead to relatively mild cortical malformation phenotypes. 31386652 2019
Entrez Id: 7227
Gene Symbol: TRPS1
TRPS1
0.020 Biomarker group BEFREE The three patients with pathogenic CNVs had combined pituitary hormone deficiencies, and the associated complex phenotypes were intellectual disabilities: trichorhinophalangeal type I syndrome (TRPS1) and developmental delay/intellectual disability with cardiac malformation, respectively. 29265571 2018
Entrez Id: 7227
Gene Symbol: TRPS1
TRPS1
0.020 GeneticVariation group BEFREE Trichorhinophalangeal syndrome type 1 (TRPS1) is a rare hereditary malformation complex caused by mutations in a gene identified in the year 2000 on 8q24.12. 28528424 2017
Entrez Id: 9618
Gene Symbol: TRAF4
TRAF4
0.010 Biomarker group BEFREE TRAF4 deficiency leads to tracheal malformation with resulting alterations in air flow to the lungs. 10934170 2000