Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4043
Gene Symbol: LRPAP1
LRPAP1
0.010 Biomarker phenotype BEFREE In nontumorous gastric mucosa, parietal cells and some portions of intestinal metaplasia were stained with MoAb RAP-5. 3525957 1986
Entrez Id: 324
Gene Symbol: APC
APC
0.060 GeneticVariation phenotype BEFREE Since some gastric cancers are considered to originate from the intestinal metaplasia, it is likely that the adenomatous polyposis coli (APC) gene, the mutation of which causes adenomatous polyps in the colon, is associated with carcinogenesis of gastric cancer. 1317264 1992
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 AlteredExpression phenotype BEFREE Chronic atrophic gastritis with complete intestinal metaplasia (IM) was seen in three patients. p53 protein was not expressed in any of the cases. 8319165 1993
Entrez Id: 6476
Gene Symbol: SI
SI
0.020 AlteredExpression phenotype BEFREE Columnar cells of specialized Barrett's epithelium express SI and are, therefore, phenotypically similar to those in incomplete intestinal metaplasia of the stomach with respect to intestinal gene expression. 8359653 1993
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 Biomarker phenotype BEFREE Using a monoclonal antibody (PAb1801), nuclear p53 was detected in 22 of 45 (49%) cases of gastric carcinoma, and no staining for p53 was demonstrated in the adjacent normal epithelium, including areas of intestinal metaplasia. 8116572 1994
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation phenotype BEFREE Telomere reduction, tpr-met oncogenic rearrangement, overexpression of cripto, p53 mutations, adenomatous polyposis coli gene mutations and K-ras mutations, which are frequently associated with the well differentiated or intestinal type of stomach cancer, were found in intestinal metaplasia and adenoma of the stomach. 7735945 1994
Entrez Id: 4583
Gene Symbol: MUC2
MUC2
0.100 AlteredExpression phenotype BEFREE In contrast, high levels of MUC2 and MUC3 mucin mRNA and immunoreactive protein were found in specimens with intestinal metaplasia. 7780985 1995
Entrez Id: 4584
Gene Symbol: MUC3A
MUC3A
0.040 AlteredExpression phenotype BEFREE In contrast, high levels of MUC2 and MUC3 mucin mRNA and immunoreactive protein were found in specimens with intestinal metaplasia. 7780985 1995
Entrez Id: 57876
Gene Symbol: MUC3B
MUC3B
0.030 AlteredExpression phenotype BEFREE In contrast, high levels of MUC2 and MUC3 mucin mRNA and immunoreactive protein were found in specimens with intestinal metaplasia. 7780985 1995
Entrez Id: 140453
Gene Symbol: MUC17
MUC17
0.030 AlteredExpression phenotype BEFREE In contrast, high levels of MUC2 and MUC3 mucin mRNA and immunoreactive protein were found in specimens with intestinal metaplasia. 7780985 1995
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 Biomarker phenotype BEFREE Numerical aberrations of chromosome 17 and the p53 gene were undetectable both in normal mucosa and in intestinal metaplasia. 8647618 1996
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 Biomarker phenotype BEFREE Immunohistochemistry detected 19 foci showing nuclear accumulation of p53 protein in non-neoplastic gastric mucosa in a total of 756 sections (477 of which contained intestinal metaplasia) from 16 resected stomachs containing gastric adenocarcinomas. 8600055 1996
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 AlteredExpression phenotype BEFREE These results indicate that incomplete intestinal metaplasia is associated with increased cell turnover and p53 overexpression, possibly in response to various noxious or DNA-damaging stimuli. 8691342 1996
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.020 Biomarker phenotype BEFREE Positive nuclear staining for the cyclin D1 protein in Barrett's disease with intestinal metaplasia was found in 38% of the male cases and 25% of the female cases, whereas in gastric metaplasia it was positive in 33% of men and 48% of women. 8781742 1996
Entrez Id: 960
Gene Symbol: CD44
CD44
0.010 AlteredExpression phenotype BEFREE We generated DNA probes for CD44 variable region exons 11 (v6) to 14 (v9) and also for intronic sequences and examined the expression of aberrant CD44 transcripts in digestive tract carcinomas, colorectal adenomas and intestinal metaplasia of the stomach. 8608952 1996
Entrez Id: 9260
Gene Symbol: PDLIM7
PDLIM7
0.010 Biomarker phenotype BEFREE LMP-1 was detected in areas of intestinal metaplasia in eight patients with chronic atrophic gastritis. 9422984 1997
Entrez Id: 1950
Gene Symbol: EGF
EGF
0.010 AlteredExpression phenotype BEFREE Patients underwent upper GL endoscopy.Gastric biopsies for routine histology, Helicobacter pylori detection, quantification of intestinal metaplasia and EGF-R expression analysis were performed. 9175212 1997
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.010 GeneticVariation phenotype BEFREE Expression of the epidermal growth factor receptor gene in human intestinal metaplasia: a preliminary report. 9175212 1997
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 GeneticVariation phenotype BEFREE They may precede DNA replication error, DNA hypermethylation, CD44 abnormal transcript and p53 mutations, all of which occur in at least 30% of intestinal metaplasia as early events of multistep pathogenesis of well differentiated type gastric cancer. 9784010 1998
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.010 AlteredExpression phenotype BEFREE Expression of iNOS mRNA was closely correlated with expression of TNF-alpha and was observed frequently in subjects with intestinal metaplasia. 9802453 1998
Entrez Id: 1576
Gene Symbol: CYP3A4
CYP3A4
0.010 AlteredExpression phenotype BEFREE Western blotting and RT-PCR demonstrated that CYP3A4 protein and mRNA were expressed in the liver and pyloric gland mucosa with intestinal metaplasia, but not in the fundic gland mucosa without intestinal metaplasia. 9849581 1998
Entrez Id: 9360
Gene Symbol: PPIG
PPIG
0.010 AlteredExpression phenotype BEFREE Possible roles of CYP expression in the gastric mucosa with intestinal metaplasia in human stomach carcinogenesis are briefly discussed. 9849581 1998
Entrez Id: 3732
Gene Symbol: CD82
CD82
0.010 Biomarker phenotype BEFREE KAI1 was immunohistochemically detected in the lower part of fundic glands and intestinal metaplasia in non-cancerous gastric tissues, while only 11.0% (8/73) of cancerous tissues were shown to be positive. 9719466 1998
Entrez Id: 4583
Gene Symbol: MUC2
MUC2
0.100 AlteredExpression phenotype BEFREE These data indicate that MUC2 mucin is expressed in gastric regenerative epithelium in addition to intestinal metaplasia and intestinal type adenocarcinoma. 10633292 1999
Entrez Id: 4583
Gene Symbol: MUC2
MUC2
0.100 AlteredExpression phenotype BEFREE The intestinal mucin MUC2 was expressed in every case of incomplete intestinal metaplasia, mostly in goblet cells. 10070955 1999