Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23152
Gene Symbol: CIC
CIC
0.110 GeneticVariation disease CLINVAR
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.060 Biomarker disease BEFREE EGFR gene amplification was found in only one case of anaplastic oligodendroglioma, which additionally showed a deletion/rearrangement at the 5' end of the gene. 8686753 1996
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.020 AlteredExpression disease BEFREE Results showed that VEGF was moderately to strongly expressed in 8 of 10 ependymomas and in all anaplastic oligodendrogliomas and glioblastoma multiforme cases. 9669344 1998
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 GeneticVariation disease BEFREE The inverse relationship between CDKN2A gene deletions and losses of chromosomes 1p and 19q further implies that these differential clinical behaviors reflect two independent genetic subtypes of anaplastic oligodendroglioma. 9776413 1998
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.080 Biomarker disease BEFREE Therefore, we have analyzed molecular genetic alterations involving chromosomes 1p, 10q, and 19q and the TP53 (on chromosome 17p) and CDKN2A (on chromosome 9p) genes, in addition to clinicopathologic features in 39 patients with anaplastic oligodendrogliomas for whom chemotherapeutic response and survival could be assessed. 9776413 1998
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.050 GeneticVariation disease BEFREE We investigated 47 glioblastomas (GBM), 14 anaplastic astrocytomas (AA), 6 non-pilocytic low-grade astrocytomas (LGA), 21 low-grade and anaplastic oligodendrogliomas (O) and oligoastrocytomas (OA), and 3 ependymomas (E) for mutation of the PTEN gene using denaturing gradient gel electrophoresis (DGGE) followed by DNA sequencing. 10096247 1999
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 Biomarker disease BEFREE CDKN2/p16 expression was frequently decreased in grade II and anaplastic oligodendrogliomas (17/42) where lack of CDKN2/p16 protein predicted poor survival (p = 0.0045). 10359140 1999
Entrez Id: 1017
Gene Symbol: CDK2
CDK2
0.010 Biomarker disease BEFREE CDKN2/p16 expression was frequently decreased in grade II and anaplastic oligodendrogliomas (17/42) where lack of CDKN2/p16 protein predicted poor survival (p = 0.0045). 10359140 1999
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 GeneticVariation disease BEFREE These findings demonstrate that oligodendroglial neoplasms usually have loss of 1p and 19q whereas astrocytomas of the progressive type frequently contain mutations of the TP53 gene, and that 9p loss and CDKN2A deletions are associated with progression from well-differentiated to anaplastic oligodendrogliomas. 10433931 1999
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.080 GeneticVariation disease BEFREE These findings demonstrate that oligodendroglial neoplasms usually have loss of 1p and 19q whereas astrocytomas of the progressive type frequently contain mutations of the TP53 gene, and that 9p loss and CDKN2A deletions are associated with progression from well-differentiated to anaplastic oligodendrogliomas. 10433931 1999
Entrez Id: 1031
Gene Symbol: CDKN2C
CDKN2C
0.010 GeneticVariation disease BEFREE Homozygous deletions of the CDKN2C/p18INK4C gene on the short arm of chromosome 1 in anaplastic oligodendrogliomas. 10517502 1999
Entrez Id: 57534
Gene Symbol: MIB1
MIB1
0.020 GeneticVariation disease BEFREE De novo WHO Grade 2 oligodendrogliomas had higher Bcl-2 scores (P = 0.037), lower MIB-1 scores (P = 0.0012), and lower ISNT scores (P = 0.049) compared with de novo WHO Grade 3 anaplastic oligodendrogliomas. 10547558 1999
Entrez Id: 4288
Gene Symbol: MKI67
MKI67
0.020 GeneticVariation disease BEFREE De novo WHO Grade 2 oligodendrogliomas had higher Bcl-2 scores (P = 0.037), lower MIB-1 scores (P = 0.0012), and lower ISNT scores (P = 0.049) compared with de novo WHO Grade 3 anaplastic oligodendrogliomas. 10547558 1999
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.020 AlteredExpression disease BEFREE In the current study, Bcl-2 family protein expression was examined in oligodendrogliomas and anaplastic oligodendrogliomas, and an attempt was made to determine whether these proteins accumulate during disease progression and to search for protein expression patterns predictive of time to progression and overall survival. 10547558 1999
Entrez Id: 4194
Gene Symbol: MDM4
MDM4
0.010 Biomarker disease BEFREE We investigated a series of 208 gliomas (106 glioblastomas, 46 anaplastic gliomas, and 56 low-grade gliomas) and identified 5 tumors (4 glioblastomas and 1 anaplastic oligodendroglioma) with MDM4 amplification and overexpression. 10626796 1999
Entrez Id: 57534
Gene Symbol: MIB1
MIB1
0.020 Biomarker disease BEFREE With multivariate survival analysis MIB-LI lost prognostic significance in O and AO. 10720205 1999
Entrez Id: 4288
Gene Symbol: MKI67
MKI67
0.020 Biomarker disease BEFREE With multivariate survival analysis MIB-LI lost prognostic significance in O and AO. 10720205 1999
Entrez Id: 9780
Gene Symbol: PIEZO1
PIEZO1
0.010 Biomarker disease BEFREE With multivariate survival analysis MIB-LI lost prognostic significance in O and AO. 10720205 1999
Entrez Id: 1351
Gene Symbol: COX8A
COX8A
0.010 GeneticVariation disease BEFREE It contains 15 exons, including an exon defined by an anaplastic oligodendroglioma expressed sequence tag, and spans at least 61.7 kilobases. hUlip lacks sequences corresponding to the first six exons found in unc-33. unc-33 exons correspond to homologous hUlip exons as follows: VII to 1 and 2, VIII to 3-9, IX to 10-12, and X to 13 and 14. 10748015 2000
Entrez Id: 5156
Gene Symbol: PDGFRA
PDGFRA
0.030 Biomarker disease BEFREE PDGFRA gene amplification was identified in 4 anaplastic oligodendrogliomas and in a single case of anaplastic oligoastrocytoma, but in none of the malignant astrocytomas. 10850862 2000
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 AlteredExpression disease BEFREE These data suggest that aberrant p14ARF expression due to hypermethylation is the earliest INK4a/ARF change in the evolution of oligodendrogliomas, while the presence of p14ARF and p16INK4a deletions indicates progression to anaplastic oligodendroglioma. 11307615 2001
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.010 AlteredExpression disease BEFREE In the present study, MDR1 P-gp was immunodetected by Western blot analysis in 60 human brain tumors, including meningiomas, schwannomas, low-grade gliomas (astrocytomas, pilocytic astrocytomas) and high-grade gliomas (anaplastic astrocytomas, glioblastomas and anaplastic oligodendrogliomas). 11391622 2001
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.050 Biomarker disease BEFREE PTEN is a target of chromosome 10q loss in anaplastic oligodendrogliomas and PTEN alterations are associated with poor prognosis. 11438483 2001
Entrez Id: 2670
Gene Symbol: GFAP
GFAP
0.020 Biomarker disease BEFREE Five cases of anaplastic oligodendrogliomas containing numerous GFAP-positive cells have been analysed by electron microscopy to establish the fine structural characteristics of neoplastic cells. 11680631 2001
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 GeneticVariation disease BEFREE In this study, we screened 28 oligodendrogliomas (WHO grade II) and 20 anaplastic oligodendrogliomas (WHO grade III) for alterations in the RB1/CDK4/p16INK4a/p15INK4b and TP53/p14ARF/MDM2 pathways. 11764090 2001