Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4175
Gene Symbol: MCM6
MCM6
0.010 Biomarker disease BEFREE Ki-67 and MCM6 labeling indices are correlated with overall survival in anaplastic oligodendroglioma, IDH1-mutant and 1p/19q-codeleted: a multicenter study from the French POLA network. 31561286 2019
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.010 GeneticVariation disease BEFREE According to the new classification, diagnoses included oligodendroglioma with isocitrate dehydrogenase (IDH) mutation and 1p/19q co-deletion (5.4%), anaplastic oligodendroglioma with IDH mutation and 1p/19q co-deletion (3.4%), diffuse astrocytoma IDH-mutated (3.9%), anaplastic astrocytoma IDH-mutated (2.8%), glioblastoma IDH-mutated (7.8%), glioblastoma IDH-wildtype (58.4%), diffuse midline glioma H3 K27M mutation (2.6%), oligodendroglioma NOS (1.3%), anaplastic oligodendroglioma NOS (0.8%), diffuse astrocytoma IDH-wildtype (2.8%), and anaplastic astrocytoma IDH-wildtype (10.9%). 29470683 2018
Entrez Id: 4842
Gene Symbol: NOS1
NOS1
0.010 GeneticVariation disease BEFREE According to the new classification, diagnoses included oligodendroglioma with isocitrate dehydrogenase (IDH) mutation and 1p/19q co-deletion (5.4%), anaplastic oligodendroglioma with IDH mutation and 1p/19q co-deletion (3.4%), diffuse astrocytoma IDH-mutated (3.9%), anaplastic astrocytoma IDH-mutated (2.8%), glioblastoma IDH-mutated (7.8%), glioblastoma IDH-wildtype (58.4%), diffuse midline glioma H3 K27M mutation (2.6%), oligodendroglioma NOS (1.3%), anaplastic oligodendroglioma NOS (0.8%), diffuse astrocytoma IDH-wildtype (2.8%), and anaplastic astrocytoma IDH-wildtype (10.9%). 29470683 2018
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.010 GeneticVariation disease BEFREE Impact of 9p deletion and p16, Cyclin D1, and Myc hyperexpression on the outcome of anaplastic oligodendrogliomas. 29489901 2018
Entrez Id: 6938
Gene Symbol: TCF12
TCF12
0.010 GeneticVariation disease BEFREE Overall, 7.5% of AO are mutated for TCF12, which encodes an oligodendrocyte-related transcription factor. 26068201 2015
Entrez Id: 110806263
Gene Symbol: LOC110806263
LOC110806263
0.010 GeneticVariation disease BEFREE Mutually exclusive mutations in TERT promoter, C228T and C250T, were identified in 16/105 (15%) diffuse astrocytomas, 16/63 (25%) anaplastic astrocytomas, 13/18 (72%) oligodendrogliomas, 3/3 (100%) anaplastic oligodendrogliomas, 17/45 (38%) oligoastrocytomas, and 2/3 (67%) anaplastic oligoastrocytomas. 25081751 2015
Entrez Id: 285
Gene Symbol: ANGPT2
ANGPT2
0.010 Biomarker disease BEFREE Within the 1p/19q-codeleted AO, the contrast enhancement was associated with larger tumor volumes (P = .001), chromosome 9p loss and CDKN2A loss (P = .006), genomic instability (P = .03), and angiogenesis-related gene expression (P < .001), particularly for vascular endothelial growth factor A and angiopoietin 2. 24353325 2014
Entrez Id: 64321
Gene Symbol: SOX17
SOX17
0.010 AlteredExpression disease BEFREE The rates of Sox17 expression were significantly different in oligodendrogliomas (82%) and anaplastic oligodendrogliomas (62%, P = 0.026). 25674225 2014
Entrez Id: 2194
Gene Symbol: FASN
FASN
0.010 AlteredExpression disease BEFREE Moreover, FAS expression was increased in glioblastomas (83.3%), anaplastic oligodendrogliomas and oligoastrocytomas (80%), and anaplastic astrocytomas (78.9%) compared with non-neoplastic lesions (20%). 23064941 2013
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
0.010 GeneticVariation disease BEFREE This case report describes a 15 year-old male with a confirmed germline mutation of MSH2 and early onset anaplastic oligodendroglioma. 23255519 2013
Entrez Id: 6513
Gene Symbol: SLC2A1
SLC2A1
0.010 Biomarker disease BEFREE Glut-1 may be useful in predicting PFS in AOs. 22396073 2012
Entrez Id: 6657
Gene Symbol: SOX2
SOX2
0.010 Biomarker disease BEFREE SOX2 gene amplification was found in neurospheres and 14.4% and 11.1% of glioblastomas and anaplastic oligodendrogliomas, respectively. 21518820 2011
Entrez Id: 836
Gene Symbol: CASP3
CASP3
0.010 AlteredExpression disease BEFREE Although independent expression of Bcl-2 was insufficient to induce tumors, suppression of apoptosis (detected by cleaved caspase-3 expression) was more pronounced in AOs induced by PDGFB and Bcl-2 compared to those induced by PDGFB alone. 21171016 2011
Entrez Id: 5155
Gene Symbol: PDGFB
PDGFB
0.010 Biomarker disease BEFREE Coexpression of PDGFB and Bcl-2 promotes progression to AO with prominent foci of necrosis, a feature of high-grade gliomas. 21171016 2011
Entrez Id: 326340
Gene Symbol: ZAR1
ZAR1
0.010 PosttranslationalModification disease BEFREE Strikingly, hypermethylation of ZAR1 was observed frequently in diffuse astrocytomas (100%), anaplastic astrocytomas (94%), glioblastomas (93%), oligodendrogliomas (100%), anaplastic oligodendrogliomas (100%), and pituitary adenomas (90%), but not at all in pilocytic astrocytomas. 21331615 2011
Entrez Id: 1806
Gene Symbol: DPYD
DPYD
0.010 GeneticVariation disease BEFREE Novel regions of homozygous deletion, including a part of DPYD (1p21.3) or the KLK cluster (19q13.33), were observed in anaplastic oligodendrogliomas. 20164239 2010
Entrez Id: 1116
Gene Symbol: CHI3L1
CHI3L1
0.010 AlteredExpression disease BEFREE YKL-40 expression was higher in GBMs than AOs (P < 0.0001) and among GBMs, YKL-40 expression was lower in tumors with either EGFR amplification (P = 0.005) or elevated EGFR expression (P = 0.001). 20224722 2010
Entrez Id: 3485
Gene Symbol: IGFBP2
IGFBP2
0.010 Biomarker disease BEFREE When endogenous IGFBP2 expression was attenuated by an RCAS vector expressing antisense IGFBP2 in our mouse model, a decreased incidence of anaplastic oligodendroglioma as well as prolonged survival was observed. 19805356 2009
Entrez Id: 56994
Gene Symbol: CHPT1
CHPT1
0.010 Biomarker disease BEFREE CPT-11 demonstrated modest efficacy (similar to other salvage glioma regimens) with acceptable toxicity in this cohort of adults with recurrent, 1p19q co-deleted AO all of whom had failed prior TMZ chemotherapy. 18480965 2008
Entrez Id: 79947
Gene Symbol: DHDDS
DHDDS
0.010 Biomarker disease BEFREE CPT-11 demonstrated modest efficacy (similar to other salvage glioma regimens) with acceptable toxicity in this cohort of adults with recurrent, 1p19q co-deleted AO all of whom had failed prior TMZ chemotherapy. 18480965 2008
Entrez Id: 3925
Gene Symbol: STMN1
STMN1
0.010 GeneticVariation disease BEFREE Loss of heterozygosity for the stathmin gene may be associated with improved outcomes of patients with 1p+/- anaplastic oligodendroglioma tumors. 17440165 2007
Entrez Id: 11010
Gene Symbol: GLIPR1
GLIPR1
0.010 AlteredExpression disease BEFREE In contrast, RTVP-1 and RTVP-1b showed similar patterns of expression in astrocytic tumors; highly expressed in glioblastomas as compared to normal brains, low-grade astrocytomas and anaplastic oligodendrogliomas. 17825796 2007
Entrez Id: 8605
Gene Symbol: PLA2G4C
PLA2G4C
0.010 AlteredExpression disease BEFREE In addition, we found that the cytosolic phospholipase A2 (PLA2G4C) gene at 19q13.3 demonstrated significantly lower expression in anaplastic oligodendrogliomas (WHO grade III) when compared to well-differentiated oligodendrogliomas (WHO grade II). 16550607 2006
Entrez Id: 5321
Gene Symbol: PLA2G4A
PLA2G4A
0.010 AlteredExpression disease BEFREE In addition, we found that the cytosolic phospholipase A2 (PLA2G4C) gene at 19q13.3 demonstrated significantly lower expression in anaplastic oligodendrogliomas (WHO grade III) when compared to well-differentiated oligodendrogliomas (WHO grade II). 16550607 2006
Entrez Id: 3981
Gene Symbol: LIG4
LIG4
0.010 Biomarker disease BEFREE The DNA repair enzyme O(6)-methylguanine DNA methyltransferase (MGMT) may cause resistance to DNA-alkylating drugs commonly used in the treatment of anaplastic oligodendrogliomas and other malignant gliomas. 15455350 2005