Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 841
Gene Symbol: CASP8
CASP8
0.310 Biomarker disease CTD_human Comprehensive analysis of DNA methylation in head and neck squamous cell carcinoma indicates differences by survival and clinicopathologic characteristics. 23358896 2013
Entrez Id: 841
Gene Symbol: CASP8
CASP8
0.310 Biomarker disease BEFREE This result points towards an important role of CASP8 in HPV infection and in the development of pre-cancers. 21328377 2011
Entrez Id: 8900
Gene Symbol: CCNA1
CCNA1
0.300 Biomarker disease CTD_human Comprehensive analysis of DNA methylation in head and neck squamous cell carcinoma indicates differences by survival and clinicopathologic characteristics. 23358896 2013
Entrez Id: 6845
Gene Symbol: VAMP7
VAMP7
0.300 Biomarker disease CTD_human Comprehensive analysis of DNA methylation in head and neck squamous cell carcinoma indicates differences by survival and clinicopathologic characteristics. 23358896 2013
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.100 Biomarker disease BEFREE We analyzed high-risk HPV infection by HPV-RNA in situ hybridization and EGFR gene copy number gain (CNG) by chromogenic in situ hybridization and by determining the protein expressions of p16, Rb, and EGFR by immunohistochemistry in 101 SNSCC cases. 31743130 2020
Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
0.100 Biomarker disease BEFREE Molecular tests (in situ hybridization and polymerase chain reaction) showed no evidence of human papillomavirus infection and p16 staining was negative. 30480645 2020
Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
0.100 Biomarker disease BEFREE Our study demonstrated that the p16 positive immunostaining was seen in the majority of primary vulvar EMPD which is not related to HPV infection. 31033795 2020
Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
0.100 AlteredExpression disease BEFREE HPV infection (n=9, 8.9%) and p16 overexpression (n=15, 14.9%) were associated with better overall survival (P=0.0042 and 0.005, respectively). 31743130 2020
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 Biomarker disease BEFREE Immunohistochemistry for p16 (as a surrogate for high-risk HPV infection) and p53 was performed. 31771962 2020
Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
0.100 Biomarker disease BEFREE We aimed to assess utility of such histological features and p16 as surrogate markers of HPV infection in a retrospective cohort of 33 cases of severe epithelial dysplasia, with matched clinicopathological data and histological features. 31617604 2020
Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
0.100 Biomarker disease BEFREE Immunohistochemistry for p16 (as a surrogate for high-risk HPV infection) and p53 was performed. 31771962 2020
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 Biomarker disease BEFREE Our study demonstrated that the p16 positive immunostaining was seen in the majority of primary vulvar EMPD which is not related to HPV infection. 31033795 2020
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 AlteredExpression disease BEFREE HPV infection (n=9, 8.9%) and p16 overexpression (n=15, 14.9%) were associated with better overall survival (P=0.0042 and 0.005, respectively). 31743130 2020
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 Biomarker disease BEFREE Molecular tests (in situ hybridization and polymerase chain reaction) showed no evidence of human papillomavirus infection and p16 staining was negative. 30480645 2020
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 Biomarker disease BEFREE We aimed to assess utility of such histological features and p16 as surrogate markers of HPV infection in a retrospective cohort of 33 cases of severe epithelial dysplasia, with matched clinicopathological data and histological features. 31617604 2020
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 Biomarker disease BEFREE Immunohistochemistry for p16 (as a surrogate for high-risk HPV infection) and p53 was performed. 31771962 2020
Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
0.100 Biomarker disease BEFREE Adjunctive immunohistochemistry tests for human papillomavirus (HPV) infection include p16 and Ki67 as well as the more recently discovered biomarkers importin-β, exportin-5, Mcl1, and PDL1. 31132653 2019
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.100 Biomarker disease BEFREE The present study was designed to investigate the association between a change in vaginal local immunity and human papilloma virus (HPV) infection outcome in patients with cervical lesions, through the study of the expression of vaginal local immune factors, interleukin (IL)-2, IL-10, secretory immunoglobulin A (sIgA) and IgG, in patients with different grades of cervical lesions and different degrees of cervical lesions caused by HPV infection prior to and following treatment. 31612062 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 Biomarker disease BEFREE HPV does not play an etiologic role in inverted papilloma or oncocytic papilloma of the sinonasal region. p16 immunostaining should not be used as a surrogate marker to evaluate the HPV infection status in these lesions. 31797088 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 Biomarker disease BEFREE Overexpression of p16 was not found to be a reliable biomarker for HPV infection in patients with OL and OSCC. 30842161 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 Biomarker disease BEFREE While widely used, p16 immunohistochemistry is both a sensitive and a specific surrogate marker for oncogenic HPV infection in OPSCC, but not in OSCC. 30238467 2019
Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
0.100 Biomarker disease BEFREE Tumor sections from established tumors were stained for p16 (surrogate for human papillomavirus (HPV) infection), stromal (Masson's trichrome) and vascular (CD31) markers. 31284584 2019
Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
0.100 Biomarker disease BEFREE While widely used, p16 immunohistochemistry is both a sensitive and a specific surrogate marker for oncogenic HPV infection in OPSCC, but not in OSCC. 30238467 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.100 AlteredExpression disease BEFREE Histological examination, presence of HPV infection and OncoScan analysis of DNA extracted from two well-defined areas with different p16 expression profiles were performed. 30552721 2019
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.100 Biomarker disease BEFREE Since E6 and E7 viral protein interaction with cell proteins pRb and p53 is mandatory for cell transformation, HPV RNA CISH is functionally relevant and acutely reflects active oncogenic HPV infection. 31259898 2019