Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 GeneticVariation disease CLINVAR
Entrez Id: 147912
Gene Symbol: SIX5
SIX5
0.300 Biomarker disease CTD_human
Entrez Id: 6495
Gene Symbol: SIX1
SIX1
0.300 Biomarker disease CTD_human
Entrez Id: 100130275
Gene Symbol: TFAP2A-AS1
TFAP2A-AS1
0.100 GeneticVariation disease CLINVAR
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 AlteredExpression disease BEFREE (2019) use direct reprogramming, epigenetics, and chromatin architecture studies to demonstrate that developmental defects observed in a BOFS patient are caused by reduced expression of TFAP2A in neural crest cells due to the spatial separation of the promoter from its neural crest enhancers. 31051129 2019
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 GeneticVariation disease BEFREE Branchio-oculo-facial syndrome (BOFS) is a craniofacial disorder caused by TFAP2A mutations. 23307527 2013
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 AlteredExpression disease BEFREE TFAP2A has been seen involved in orofacial development in mice; it is located in the NSCLP candidate region 6p24; it codes for a transcription factor which regulates expression of IRF6, a gene implied in NSCLP; finally, it is embroiled in the branchiooculofacial syndrome, that includes clefting as feature. 21781438 2013
Entrez Id: 284252
Gene Symbol: KCTD1
KCTD1
0.010 GeneticVariation disease BEFREE KCTD1 inhibits the transactivation of the transcription factor AP-2α (TFAP2A) via its BTB domain, and mutations in TFAP2A cause cutis aplasia in individuals with branchiooculofacial syndrome (BOFS), suggesting a potential overlap in the pathogenesis of SEN syndrome and BOFS. 23541344 2013
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 CausalMutation disease CLINVAR A clinical and molecular analysis of branchio-oculo-facial syndrome patients in Russia revealed new mutations in TFAP2A. 25590586 2015
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 GeneticVariation disease BEFREE A mutation in the TFAP2A gene associated with BOFS (heterozygous H384Y in exon 7) was found in both the proband and her mother. 22191992 2012
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 GeneticVariation disease BEFREE Confirmation of TFAP2A gene involvement in branchio-oculo-facial syndrome (BOFS) and report of temporal bone anomalies. 19764023 2009
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 GeneticVariation disease BEFREE Direct sequencing of the coding region of the TFAP2A gene revealed missense mutations in four BOFS patients. 25590586 2015
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 GeneticVariation disease BEFREE DNA analysis of the TFAP2A gene associated with BOFS using DNA sequencing detected a mutation [c.763A>G (p.Arg255Gly)] in two unrelated patients. 20358615 2010
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 Biomarker disease GENOMICS_ENGLAND Exclusion of the branchio-oto-renal syndrome locus (EYA1) from patients with branchio-oculo-facial syndrome. 10767004 2000
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 GeneticVariation disease BEFREE Here, we present a BOFS patient carrying a heterozygous inversion with one breakpoint located within a topologically associating domain (TAD) containing enhancers essential for TFAP2A expression in human neural crest cells (hNCCs). 30982769 2019
Entrez Id: 2138
Gene Symbol: EYA1
EYA1
0.310 GeneticVariation disease BEFREE In light of these issues, we selected the BOR locus (EYA1) as a possible gene mutation for the BOF syndrome. 10767004 2000
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 GeneticVariation disease BEFREE KCTD1 inhibits the transactivation of the transcription factor AP-2α (TFAP2A) via its BTB domain, and mutations in TFAP2A cause cutis aplasia in individuals with branchiooculofacial syndrome (BOFS), suggesting a potential overlap in the pathogenesis of SEN syndrome and BOFS. 23541344 2013
Entrez Id: 57822
Gene Symbol: GRHL3
GRHL3
0.010 GeneticVariation disease BEFREE Like IRF6 and GRHL3, rare variants in TFAP2A can also lead to syndromic orofacial clefting with lip pits (branchio-oculo-facial syndrome). 26332872 2016
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 GeneticVariation disease BEFREE Like IRF6 and GRHL3, rare variants in TFAP2A can also lead to syndromic orofacial clefting with lip pits (branchio-oculo-facial syndrome). 26332872 2016
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 GeneticVariation disease BEFREE Mutations in the TFAP2A gene have been reported in patients with BOFS, prompting phenotype-genotype studies because of the variable clinical spectrum. 21728810 2011
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 GeneticVariation disease BEFREE Our report implies that the localization of mutations in TFAP2A might be responsible with the phenotypic findings in BOF syndrome. 19206157 2009
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 Biomarker disease GENOMICS_ENGLAND Physical and genetic localization of the gene encoding the AP-2 transcription factor to mouse chromosome 13. 8824807 1996
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 Biomarker disease GENOMICS_ENGLAND Second, we determined that TFAP2A is expressed in the lens, neural retina, nasal process, and epithelial lining of the oral cavity and palatal shelves of human and mouse embryos--sites consistent with the phenotype observed in patients with BOFS. 19685247 2009
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 AlteredExpression disease BEFREE Second, we determined that TFAP2A is expressed in the lens, neural retina, nasal process, and epithelial lining of the oral cavity and palatal shelves of human and mouse embryos--sites consistent with the phenotype observed in patients with BOFS. 19685247 2009
Entrez Id: 7020
Gene Symbol: TFAP2A
TFAP2A
0.800 Biomarker disease CTD_human Second, we determined that TFAP2A is expressed in the lens, neural retina, nasal process, and epithelial lining of the oral cavity and palatal shelves of human and mouse embryos--sites consistent with the phenotype observed in patients with BOFS. 19685247 2009