Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4487
Gene Symbol: MSX1
MSX1
0.540 AlteredExpression disease BEFREE Dental agenesis in this respect is believed to result from altered expression of one or more of these factors during initiation and early morphogenesis of the tooth germ, and the first actors identified were MSX1 and PAX9. 27491081 2016
Entrez Id: 4487
Gene Symbol: MSX1
MSX1
0.540 GeneticVariation disease BEFREE Effects of PAX9 and MSX1 gene variants to hypodontia, tooth size and the type of congenitally missing teeth. 28040065 2016
Entrez Id: 4487
Gene Symbol: MSX1
MSX1
0.540 AlteredExpression disease BEFREE PAX9 and MSX1 transcription factor genes in non-syndromic dental agenesis. 21111400 2011
Entrez Id: 4487
Gene Symbol: MSX1
MSX1
0.540 Biomarker disease MGD Msx1 and Dlx5 act independently in development of craniofacial skeleton, but converge on the regulation of Bmp signaling in palate formation. 16330189 2006
Entrez Id: 4487
Gene Symbol: MSX1
MSX1
0.540 Biomarker disease BEFREE MSX1 and PAX9 have been associated with tooth agenesis in mice and humans, but interestingly for humans, these genes are associated with specific missing teeth. 12598542 2003
Entrez Id: 4487
Gene Symbol: MSX1
MSX1
0.540 Biomarker disease MGD Insertional mutation of the mouse Msx1 homeobox gene by an nlacZ reporter gene. 9256350 1997
Entrez Id: 4487
Gene Symbol: MSX1
MSX1
0.540 Biomarker disease MGD Msx1 deficient mice exhibit cleft palate and abnormalities of craniofacial and tooth development. 7914451 1994
Entrez Id: 4487
Gene Symbol: MSX1
MSX1
0.540 Biomarker disease CTD_human
Entrez Id: 5083
Gene Symbol: PAX9
PAX9
0.300 Biomarker disease BEFREE The findings show that isolated dental agenesis exists as part of a spectrum of syndromes for all the identified genes except PAX9 and that the pattern of dental agenesis can be useful in clinical diagnosis to identify (or narrow) the causative gene mutations. 29879364 2018
Entrez Id: 5083
Gene Symbol: PAX9
PAX9
0.300 GeneticVariation disease BEFREE In order to screen for the eventual genetic cause of dental agenesis in this family we sequenced 4 genes; PAX9, WNT10A, MSX1 and AXIN2 using Sanger sequencing. 27491081 2016
Entrez Id: 4054
Gene Symbol: LTBP3
LTBP3
0.300 Biomarker disease CTD_human New recessive truncating mutation in LTBP3 in a family with oligodontia, short stature, and mitral valve prolapse. 25899461 2015
Entrez Id: 5083
Gene Symbol: PAX9
PAX9
0.300 GeneticVariation disease BEFREE CONCLUSIONS; These results bring us to conclude that probably other genes can determine phenotypical patterns of dental agenesis in the families studied, different than the ones described in the mutations of PAX9 and MSX1. 24316698 2014
Entrez Id: 5083
Gene Symbol: PAX9
PAX9
0.300 GeneticVariation disease BEFREE PAX9 polymorphism and susceptibility to sporadic non-syndromic severe anodontia: a case-control study in southwest China. 23857653 2013
Entrez Id: 10265
Gene Symbol: IRX5
IRX5
0.300 Biomarker disease CTD_human Mutations in IRX5 impair craniofacial development and germ cell migration via SDF1. 22581230 2012
Entrez Id: 5083
Gene Symbol: PAX9
PAX9
0.300 GeneticVariation disease BEFREE Homozygosity for the PAX9 Ala240Pro mutation was studied in a family (proband and her parents), suggesting recessive inheritance with variable expressivity for the dental agenesis found. 21111400 2011
Entrez Id: 5083
Gene Symbol: PAX9
PAX9
0.300 GeneticVariation disease BEFREE The significantly smaller tooth crown dimensions recorded in the affected family members show that the effect of the PAX9 mutation is seen not only in the congenitally missing teeth but also in smaller crown size throughout the dentition. 18653171 2009
Entrez Id: 4054
Gene Symbol: LTBP3
LTBP3
0.300 Biomarker disease CTD_human Oligodontia is caused by mutation in LTBP3, the gene encoding latent TGF-beta binding protein 3. 19344874 2009
Entrez Id: 5083
Gene Symbol: PAX9
PAX9
0.300 GeneticVariation disease BEFREE A novel nonsense mutation in PAX9 is associated with marked variability in number of missing teeth. 17697174 2007
Entrez Id: 5083
Gene Symbol: PAX9
PAX9
0.300 Biomarker disease MGD Missing teeth (hypodontia and oligodontia) are a common developmental abnormality in humans and heterozygous mutations of PAX9 have recently been shown to underlie a number of familial, non-syndromic cases. 16236760 2005
Entrez Id: 5083
Gene Symbol: PAX9
PAX9
0.300 GeneticVariation disease LHGDN A novel missense mutation in the paired domain of PAX9 causes non-syndromic oligodontia. 14689302 2004
Entrez Id: 5083
Gene Symbol: PAX9
PAX9
0.300 Biomarker disease BEFREE These findings suggest that MSX1, PAX9, and TGFA play a role in isolated dental agenesis. 15329380 2004
Entrez Id: 5083
Gene Symbol: PAX9
PAX9
0.300 Biomarker disease BEFREE MSX1 and PAX9 have been associated with tooth agenesis in mice and humans, but interestingly for humans, these genes are associated with specific missing teeth. 12598542 2003
Entrez Id: 1896
Gene Symbol: EDA
EDA
0.150 GeneticVariation disease BEFREE Genetic variations in genes known to be associated with EDs that affect only one derivative of the ectoderm (attenuated phenotype) will be grouped as non-syndromic traits of the causative gene (e.g., non-syndromic hypodontia or missing teeth associated with pathogenic variants of EDA "ectodysplasin"). 30703280 2019
Entrez Id: 1896
Gene Symbol: EDA
EDA
0.150 GeneticVariation disease BEFREE As the most common form of ectodermal dysplasia (ED), X-linked hypohidrotic ED (XLHED) is characterized by the triad of hypohidrosis, hypotrichosis, and anodontia in male patients.The gene responsible for XLHED is EDA. 30117778 2018
Entrez Id: 1896
Gene Symbol: EDA
EDA
0.150 Biomarker disease BEFREE PAX9, MSX1, AXIN2, WNT10A and EDA have been experimentally established for congenitally missing teeth like hypodontia and oligodontia. 25203534 2014