Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 51594
Gene Symbol: NBAS
NBAS
0.420 GeneticVariation phenotype BEFREE Patient 2: NBAS c.5741G>A p.(Arg1914His); c.2032C>T p.(Gln678*) in a 5-year old boy with similar presenting features, bone fragility, mild developmental delay, abnormal liver function tests and immunodeficiency. 27789416 2017
Entrez Id: 51594
Gene Symbol: NBAS
NBAS
0.420 GeneticVariation phenotype BEFREE Neuroblastoma Amplified Sequence (NBAS) mutation in recurrent acute liver failure: Confirmatory report in a sibship with very early onset, osteoporosis and developmental delay. 26578240 2015
Entrez Id: 6513
Gene Symbol: SLC2A1
SLC2A1
0.330 GeneticVariation phenotype BEFREE Fifteen children presenting with infantile seizures, acquired microcephaly, and developmental delay were found to have novel heterozygous mutations in the GLUT1 (SLC2A1). 10980529 2000
Entrez Id: 6513
Gene Symbol: SLC2A1
SLC2A1
0.330 GeneticVariation phenotype BEFREE The comparison of the clinical features between the 19 SLC2A1 mutated and the 226 non-mutated patients revealed that the onset of epilepsy within the first year of life (when associated with developmental delay or other neurological manifestations), the association of epilepsy with PD and acquired microcephaly are more common in mutated subjects. 30895386 2019
Entrez Id: 6513
Gene Symbol: SLC2A1
SLC2A1
0.330 GeneticVariation phenotype BEFREE A novel microdeletion in 1(p34.2p34.3), involving the SLC2A1 (GLUT1) gene, and severe delayed development. 17489814 2007
Entrez Id: 23334
Gene Symbol: SZT2
SZT2
0.320 GeneticVariation phenotype BEFREE Our results expand the genotype and phenotypes of SZT2-related DEEs, suggesting that SZT2 mutations play a role in developmental delay and epileptic encephalopathy, with high susceptibility to SE and relatively specific MRI findings. 31397114 2019
Entrez Id: 1282
Gene Symbol: COL4A1
COL4A1
0.320 GeneticVariation phenotype BEFREE COL4A1 mutations disrupt the integrity of vascular basement membranes, so predisposing to a broad spectrum of disorders including periventricular leucomalacia, haemorrhagic stroke, aneurysm formation, epilepsy and developmental delay. 24864020 2014
Entrez Id: 1282
Gene Symbol: COL4A1
COL4A1
0.320 GeneticVariation phenotype BEFREE A 4-year-old girl was COL4A1 mutation-positive and suffered from drug-resistant epilepsy, hemiplegia, and developmental delay. 27916450 2017
Entrez Id: 3480
Gene Symbol: IGF1R
IGF1R
0.320 GeneticVariation phenotype BEFREE Here we report small, intragenic deletions of IGF1R, identified by chromosome microarray analysis in two unrelated families affected primarily with neuropsychiatric phenotypes including developmental delay, intellectual disability and aggressive/autoaggressive behaviors. 23486542 2013
Entrez Id: 23334
Gene Symbol: SZT2
SZT2
0.320 GeneticVariation phenotype BEFREE Mutations in SZT2 have been reported in very few patients and features range from mild to moderate intellectual disability without seizures to severe intellectual disability with epileptic encephalopathies with severe developmental delay. 30359774 2019
Entrez Id: 3480
Gene Symbol: IGF1R
IGF1R
0.320 GeneticVariation phenotype BEFREE We report a six-year-old boy who presented with short stature, microcephaly, dysmorphic features, and developmental delay and who was identified with a terminal deletion of 15q26.2q26.3 containing the insulin-like growth factor receptor (IGF1R) gene in addition to a terminal duplication of the 4q35.1q35.2 region. 28720553 2017
Entrez Id: 6942
Gene Symbol: TCF20
TCF20
0.310 GeneticVariation phenotype BEFREE Furthermore, intellectual disability/developmental delay seems to be fully penetrant amongst known individuals with de novo nonsense and frameshift variants of TCF20, whereas ASD is shown to be incompletely penetrant. 27436265 2016
Entrez Id: 8242
Gene Symbol: KDM5C
KDM5C
0.310 GeneticVariation phenotype BEFREE We describe a nondysmorphic patient with developmental delay and autism spectrum disorder who has a missense mutation in the Jumonji AT-rich interactive domain 1C (JARID1C) gene. 18203167 2008
Entrez Id: 2782
Gene Symbol: GNB1
GNB1
0.310 GeneticVariation phenotype BEFREE Variants in GNB1 were identified as a genetic cause of developmental delay. 31698099 2019
Entrez Id: 23028
Gene Symbol: KDM1A
KDM1A
0.310 GeneticVariation phenotype BEFREE De novo variants in KDM1A underlie a new syndrome characterized by developmental delay and distinctive facial features. 26656649 2016
Entrez Id: 2555
Gene Symbol: GABRA2
GABRA2
0.310 GeneticVariation phenotype BEFREE Patients with the GABRA2 and GABRB3 variants also presented with severe epilepsy and developmental delay. 29961870 2018
Entrez Id: 5879
Gene Symbol: RAC1
RAC1
0.310 GeneticVariation phenotype BEFREE We report seven individuals with distinct de novo missense RAC1 mutations and varying degrees of developmental delay, brain malformations, and additional phenotypes. 28886345 2017
Entrez Id: 2558
Gene Symbol: GABRA5
GABRA5
0.310 GeneticVariation phenotype BEFREE Using whole-genome sequencing, we identified a novel de novo missense variant in GABRA5 (c.880G > C, p.V294L) in a patient with severe early-onset epilepsy and developmental delay. 29961870 2018
Entrez Id: 2741
Gene Symbol: GLRA1
GLRA1
0.310 GeneticVariation phenotype BEFREE Patients with GLRB and SLC6A5 mutations were more likely to have developmental delay (RR1.5 P < 0.01; RR1.9 P < 0.03) than those with GLRA1 mutations; 92% of GLRB cases reported a mild to severe delay in speech acquisition. 24030948 2013
Entrez Id: 6792
Gene Symbol: CDKL5
CDKL5
0.190 GeneticVariation phenotype BEFREE Mutations in the CDKL5 (cyclin-dependent kinase-like 5) gene are associated with a severe epileptic encephalopathy (early infantile epileptic encephalopathy type 2, EIEE2) characterized by early-onset intractable seizures, infantile spasms, severe developmental delay, intellectual disability, and Rett syndrome (RTT)-like features. 22921766 2013
Entrez Id: 6792
Gene Symbol: CDKL5
CDKL5
0.190 GeneticVariation phenotype BEFREE We have identified mosaic exonic deletions of CDKL5 in one male and two females with developmental delay and medically intractable seizures. 21293276 2011
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.190 Biomarker phenotype BEFREE Although the etiology of the infections is not understood, we recommend considering MECP2 dosage studies and a genetics referral in individuals with severe developmental delay and neurologic findings, especially when a history of recurrent respiratory ailments has been documented. 17088400 2006
Entrez Id: 6792
Gene Symbol: CDKL5
CDKL5
0.190 GeneticVariation phenotype BEFREE Mutations in CDKL5 and ARX are known causes of early-onset epilepsy and severe developmental delay in males and females. 23583054 2013
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.190 Biomarker phenotype BEFREE Methyl-CpG binding protein 2 gene (MECP2) testing is indicated for patients with numerous clinical presentations, including Rett syndrome (classic and atypical), unexplained neonatal encephalopathy, Angelman syndrome, nonspecific mental retardation, autism (females), and an X-linked family history of developmental delay. 22123427 2012
Entrez Id: 6792
Gene Symbol: CDKL5
CDKL5
0.190 GeneticVariation phenotype BEFREE Mutations in the X-linked Cyclin-Dependent Kinase-Like 5 gene (CDKL5) cause early onset infantile spasms and subsequent severe developmental delay in affected children. 27315173 2016