Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.190 GeneticVariation phenotype BEFREE Males with duplication of the Xq28 region, including methyl CpG-binding protein 2 (MECP2), exhibit a characteristic phenotype, including developmental delay, intellectual disability, limited or absent speech, limited or absent ambulation, and recurrent respiratory infections. 22581587 2012
Entrez Id: 6792
Gene Symbol: CDKL5
CDKL5
0.190 Biomarker phenotype BEFREE In the last few years, the X-linked serine/threonine kinase cyclin-dependent kinase-like 5 (CDKL5) has been associated with early-onset epileptic encephalopathies characterized by the manifestation of intractable epilepsy within the first weeks of life, severe developmental delay, profound hypotonia, and often the presence of some Rett-syndrome-like features. 22779007 2012
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.190 GeneticVariation phenotype BEFREE Duplication of the Xq28 region, involving MECP2 (dupMECP2), has been primarily described in males with severe developmental delay, spasticity, epilepsy, stereotyped movements and recurrent infections. 27761913 2017
Entrez Id: 6792
Gene Symbol: CDKL5
CDKL5
0.190 GeneticVariation phenotype BEFREE Most individuals with CDKL5 mutations had severe developmental delay from birth, seizure onset before the age of 3 months and similar non-dysmorphic features. 22872100 2013
Entrez Id: 6792
Gene Symbol: CDKL5
CDKL5
0.190 GeneticVariation phenotype BEFREE Mutations in the X-linked gene CDKL5 cause early-onset epileptic encephalopathy and severe developmental delay. 29510241 2018
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.190 GeneticVariation phenotype BEFREE Most male patients with MeCP2 mutations exhibit moderate to severe developmental delay/mental retardation. 12555243 2003
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.190 Biomarker phenotype BEFREE De novo MECP2 duplication derived from paternal germ line result in dysmorphism and developmental delay. 24129071 2014
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.190 Biomarker phenotype BEFREE We sequenced MECP2 in 51 females with various clinical presentations, including developmental delay, autism, atypical and classical RTT, referred to our laboratories for testing. 19365833 2009
Entrez Id: 6792
Gene Symbol: CDKL5
CDKL5
0.190 GeneticVariation phenotype BEFREE Interestingly these missense mutations that result in a mislocalisation of the CDKL5 protein are associated with severe developmental delay which was apparent within the first months of life characterised by early and generalised hypotonia, and autistic features, and as well as early infantile spasms. 17993579 2008
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.190 GeneticVariation phenotype BEFREE Furthermore, a complex duplication spanning of the MECP2 gene was identified in two brothers who presented with developmental delay and intellectual disability. 23055267 2012
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.190 GeneticVariation phenotype BEFREE This report supports broadening the phenotype of patients who should be considered for MECP2 mutation analysis to include cases of developmental delay and hypotonia without evidence of an initial period of normal development. 12210319 2002
Entrez Id: 6792
Gene Symbol: CDKL5
CDKL5
0.190 GeneticVariation phenotype BEFREE Genetic mutations of the cyclin-dependent kinase-like 5 gene (CDKL5) have been reported in patients with epileptic encephalopathy, which is characterized by intractable seizures and severe-to-profound developmental delay. 21770923 2011
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.180 GeneticVariation phenotype BEFREE Mutations in the PTEN gene have also been linked to autism spectrum disorders and other forms of delayed development. 25647146 2015
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.180 GeneticVariation phenotype BEFREE To define the prevalence of PTEN mutations in a clinical cohort of pediatric subjects with autism spectrum disorders (ASDs), developmental delay/mental retardation (DD/MR), and/or macrocephaly and to assess genotype-phenotype correlations. 19265751 2009
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.180 GeneticVariation phenotype BEFREE We have identified novel Hh pathway mutations and structural copy number variations in individuals with somatic overgrowth, macrocephaly, dysmorphic facial features, and developmental delay, which phenotypically closely resemble patients with phosphatase and tensin homolog (PTEN) mutations. 31639285 2019
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.180 GeneticVariation phenotype BEFREE The most commonly reported phenotypes described in patients with PTEN mutations are Bannayan-Riley-Ruvalcaba syndrome (BRRS), with childhood onset, macrocephaly, lipomas and developmental delay, and Cowden Syndrome (CS), an adult-onset condition recognised by mucocutaneous signs, with a risk of cancers, in particular those of the thyroid and breast. 17526800 2007
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.180 GeneticVariation phenotype BEFREE The presence of distinctive facies, extreme macrocephaly with normal to mildly high stature, and developmental delay may be useful for identifying patients with a PTEN mutation in childhood. 29752200 2018
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.180 GeneticVariation phenotype BEFREE We report nine patients with PTEN mutations and white matter changes on brain magnetic resonance imaging (MRI), eight of whom were referred for reasons other than developmental delay or ASD. 29152901 2018
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.180 GeneticVariation phenotype BEFREE The BRRS is a dominant autosomal disorder characterized by cutaneous lipomas, macrocephaly, intestinal polyps, and developmental delay associated with PTEN gene mutations. 16952599 2006
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.180 Biomarker phenotype BEFREE PTEN gene sequencing should be considered in any child with macrocephaly and autism or developmental delay. 17505203 2007
Entrez Id: 1801
Gene Symbol: DPH1
DPH1
0.140 GeneticVariation phenotype BEFREE DPH1 variants have been associated with an ultra-rare and severe neurodevelopmental disorder, mainly characterized by variable developmental delay, short stature, dysmorphic features, and sparse hair. 30877278 2020
Entrez Id: 1801
Gene Symbol: DPH1
DPH1
0.140 GeneticVariation phenotype BEFREE Ovca1 homozygous mutant mice die at birth with developmental delay and cell-autonomous proliferation defects. 15661533 2005
Entrez Id: 1801
Gene Symbol: DPH1
DPH1
0.140 GeneticVariation phenotype BEFREE In humans, DPH1 mutations cause developmental delay with a short stature, dysmorphic features, and sparse hair, and are inherited in an autosomal recessive manner (MIM#616901). 29362492 2018
Entrez Id: 1801
Gene Symbol: DPH1
DPH1
0.140 GeneticVariation phenotype BEFREE Biallelic mutations of the gene encoding diphthamide biosynthesis 1 (DPH1, NM_001383.3) cause developmental delay, dysmorphic features, sparse hair, and short stature (MIM *603527). 29410513 2018
Entrez Id: 7337
Gene Symbol: UBE3A
UBE3A
0.130 GeneticVariation phenotype BEFREE We present a female patient with developmental delay in whom we identified a maternally inherited 129-Kb duplication in chromosome region 15q11.2 encompassing only the UBE3A gene. 25884337 2015