Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.340 Biomarker disease BEFREE The similarities in the skeletal radiographs with SEMD type Strudwick and SEMD matrilin 3 type prompted us to analyze the COL2A1 and MATN3 genes. 23956136 2013
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.340 GeneticVariation disease BEFREE The similarities in the phenotype between our patients and spondyloepimetaphyseal dysplasia congenita (SEMDC) and spondyloepimetaphyseal dysplasia Strudwick (SEMDS) type, indicated that these patients could have a defect in the COL2A1 gene. 19764033 2009
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.340 GeneticVariation disease BEFREE A glycine to aspartic acid substitution of COL2A1 in a family with the Strudwick variant of spondyloepimetaphyseal dysplasia. 12925722 2003
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.340 GeneticVariation disease BEFREE We now describe the biochemical characterization of defects in alpha 1(II) collagen in three unrelated individuals with SEMD Strudwick, each of which is due to heterozygosity for a unique mutation in COL2A1. 7550321 1995
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.340 Biomarker disease MGD
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.340 Biomarker disease HPO
Entrez Id: 9060
Gene Symbol: PAPSS2
PAPSS2
0.130 GeneticVariation disease BEFREE Exclusion of the dymeclin and PAPSS2 genes in a novel form of spondyloepimetaphyseal dysplasia and mental retardation. 15726110 2005
Entrez Id: 9060
Gene Symbol: PAPSS2
PAPSS2
0.130 Biomarker disease BEFREE A large inbred family with a distinct form of recessively inherited, spondyloepimetaphyseal dysplasia (SEMD) was mapped to PAPSS2 isoform located in the chromosome region of 10q23-24. 12716056 2003
Entrez Id: 9060
Gene Symbol: PAPSS2
PAPSS2
0.130 GeneticVariation disease BEFREE We characterized a nonsense mutation in ATPSK2 in the SEMD family and a missense mutation in the region of Atpsk2 encoding the APS kinase activity in the brachymorphic mouse. 9771708 1998
Entrez Id: 9060
Gene Symbol: PAPSS2
PAPSS2
0.130 Biomarker disease HPO
Entrez Id: 4148
Gene Symbol: MATN3
MATN3
0.120 GeneticVariation disease BEFREE We transfected these contructs into the COS-1 or MCT cells, and the results revealed that the HOA-related matrilin-3 mutation (T298M) leads to a high expression level of growth arrest DNA damage-inducible gene 153 (GADD153, also known as CHOP; an endoplasmic reticulum stress marker), as shown by western blot analysis and does not significantly affect protein secretion, as shown by immunofluorescence staining; however, osteochondroplasia, i.e., MED-related (R116W) and SEMD-related (C299S) mutations lead to both high levels of GADD153 expression and protein trafficking into the cytoplasm and form multiple vacuoles in cells, which in turn leads to insufficient protein secretion. 26499313 2015
Entrez Id: 4148
Gene Symbol: MATN3
MATN3
0.120 Biomarker disease BEFREE We therefore conclude that this form of SEMD probably differs from SEMD matrilin 3 type and does not belong to the spectrum of type II collagenopathies. 23956136 2013
Entrez Id: 4322
Gene Symbol: MMP13
MMP13
0.120 GeneticVariation disease BEFREE Thus, the F56S mutation results in deficiency of MMP13, which leads to the human skeletal developmental anomaly of SEMD(MO). 16167086 2005
Entrez Id: 4322
Gene Symbol: MMP13
MMP13
0.120 GeneticVariation disease BEFREE Moreover, a mutation in the human MMP13 gene causes the Missouri variant of spondyloepimetaphyseal dysplasia. 15539485 2004
Entrez Id: 4148
Gene Symbol: MATN3
MATN3
0.120 Biomarker disease HPO
Entrez Id: 4322
Gene Symbol: MMP13
MMP13
0.120 Biomarker disease HPO
Entrez Id: 126792
Gene Symbol: B3GALT6
B3GALT6
0.110 GeneticVariation disease BEFREE Biallelic mutations in B3GALT6, encoding one of the linker region glycosyltransferases, are known to cause either spondyloepimetaphyseal dysplasia (SEMD) or a severe pleiotropic form of Ehlers-Danlos syndromes (EDS). 29931299 2018
Entrez Id: 65992
Gene Symbol: DDRGK1
DDRGK1
0.110 Biomarker disease BEFREE Loss of DDRGK1 modulates SOX9 ubiquitination in spondyloepimetaphyseal dysplasia. 28263186 2017
Entrez Id: 176
Gene Symbol: ACAN
ACAN
0.110 GeneticVariation disease BEFREE Mutations in ACAN result in a broad phenotypic spectrum of non-lethal skeletal dysplasias including spondyloepimetaphyseal dysplasia, spondyloepiphyseal dysplasia, familial osteochondritis dissecans and various undefined short stature syndromes associated with accelerated bone maturation. 27353333 2016
Entrez Id: 3835
Gene Symbol: KIF22
KIF22
0.110 GeneticVariation disease BEFREE This condition has clinical overlap with autosomal dominantly inherited SEMD with joint laxity, leptodactylic type caused by recurrent missense variants in the kinesin family member 22 gene (KIF22). 26669664 2016
Entrez Id: 126792
Gene Symbol: B3GALT6
B3GALT6
0.110 Biomarker disease HPO
Entrez Id: 176
Gene Symbol: ACAN
ACAN
0.110 Biomarker disease HPO
Entrez Id: 3835
Gene Symbol: KIF22
KIF22
0.110 Biomarker disease HPO
Entrez Id: 65992
Gene Symbol: DDRGK1
DDRGK1
0.110 Biomarker disease HPO
Entrez Id: 54187
Gene Symbol: NANS
NANS
0.100 Biomarker disease HPO