Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23384
Gene Symbol: SPECC1L
SPECC1L
0.110 Biomarker disease BEFREE Functional analysis of SPECC1L in craniofacial development and oblique facial cleft pathogenesis. 25357034 2014
Entrez Id: 23384
Gene Symbol: SPECC1L
SPECC1L
0.110 Biomarker disease HPO
Entrez Id: 55112
Gene Symbol: WDR60
WDR60
0.100 Biomarker disease HPO
Entrez Id: 57560
Gene Symbol: IFT80
IFT80
0.100 Biomarker disease HPO
Entrez Id: 89891
Gene Symbol: WDR34
WDR34
0.100 Biomarker disease HPO
Entrez Id: 51082
Gene Symbol: POLR1D
POLR1D
0.100 Biomarker disease HPO
Entrez Id: 2121
Gene Symbol: EVC
EVC
0.100 Biomarker disease HPO
Entrez Id: 8092
Gene Symbol: ALX1
ALX1
0.100 Biomarker disease HPO
Entrez Id: 54101
Gene Symbol: RIPK4
RIPK4
0.100 Biomarker disease HPO
Entrez Id: 10584
Gene Symbol: COLEC10
COLEC10
0.100 Biomarker disease HPO
Entrez Id: 57539
Gene Symbol: WDR35
WDR35
0.100 Biomarker disease HPO
Entrez Id: 9533
Gene Symbol: POLR1C
POLR1C
0.100 Biomarker disease HPO
Entrez Id: 79659
Gene Symbol: DYNC2H1
DYNC2H1
0.100 Biomarker disease HPO
Entrez Id: 80144
Gene Symbol: FRAS1
FRAS1
0.100 Biomarker disease HPO
Entrez Id: 6949
Gene Symbol: TCOF1
TCOF1
0.100 Biomarker disease HPO
Entrez Id: 132884
Gene Symbol: EVC2
EVC2
0.100 Biomarker disease HPO
Entrez Id: 3664
Gene Symbol: IRF6
IRF6
0.030 Biomarker disease BEFREE A combined targeted mutation analysis of IRF6 gene would be useful in the first screening of oral facial clefts. 23510002 2013
Entrez Id: 3664
Gene Symbol: IRF6
IRF6
0.030 GeneticVariation disease BEFREE Our findings confirmed that genetic variants of IRF6 and the polymorphism located in the 8q24 gene desert are strongly involved in the etiology of facial clefts in the Polish population sample. 20544801 2010
Entrez Id: 3664
Gene Symbol: IRF6
IRF6
0.030 GeneticVariation disease BEFREE Genetic variants in IRF6 and the risk of facial clefts: single-marker and haplotype-based analyses in a population-based case-control study of facial clefts in Norway. 18278815 2008
Entrez Id: 7546
Gene Symbol: ZIC2
ZIC2
0.010 GeneticVariation disease BEFREE In documented patients from the literature, only 2% of individuals with described pathogenic mutations in the ZIC2 gene (3/171) presented facial clefts, one of them a nasal cleft, while common oral clefts were observed in 27% of individuals (7/26) described with nonpathogenic ZIC2 mutations or presenting a concomitant mutation in another HPE gene. 24677696 2014
Entrez Id: 7341
Gene Symbol: SUMO1
SUMO1
0.010 GeneticVariation disease BEFREE Sequence analysis of DNA from newborn screening blood spots revealed a single 16 bp substitution in the SUMO-1 regulatory promoter of a patient displaying both oral-facial clefts and ASDs. 21563299 2011
Entrez Id: 121278
Gene Symbol: TPH2
TPH2
0.010 GeneticVariation disease BEFREE We found that polymorphisms in SLC6A4, TPH2, and SERPINA6 appear to be maternal factors increasing the risk of having a child with facial clefts. 22072571 2011
Entrez Id: 866
Gene Symbol: SERPINA6
SERPINA6
0.010 Biomarker disease BEFREE We found that polymorphisms in SLC6A4, TPH2, and SERPINA6 appear to be maternal factors increasing the risk of having a child with facial clefts. 22072571 2011
Entrez Id: 4691
Gene Symbol: NCL
NCL
0.010 GeneticVariation disease BEFREE As the mechanism by which folic acid and choline supplementation prevents NCL/P is poorly understood, the relationship between 16 polymorphic variants of 12 genes encoding enzymes involved in the metabolism of these two nutrients and the risk of facial clefts was investigated. 19737740 2010
Entrez Id: 8626
Gene Symbol: TP63
TP63
0.010 GeneticVariation disease BEFREE Causative TP63 mutations have been identified in five distinct human developmental disorders that are characterized by various degrees of limb abnormalities, ectodermal dysplasia, and facial clefts. 12037717 2002