Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7248
Gene Symbol: TSC1
TSC1
0.700 GeneticVariation disease BEFREE Recent studies, however, revealed that both forms of LAM are genetically related but that sporadic LAM is a distinct clinical entity caused by somatic mutations of TSC2 (not TSC1) rather than a forme fruste of TSC carrying either of the TSC1 or TSC2 germline mutations. 15257730 2004
Entrez Id: 6722
Gene Symbol: SRF
SRF
0.020 Biomarker disease BEFREE Imbalanced plasminogen system in lymphangioleiomyomatosis: potential role of serum response factor. 15514113 2005
Entrez Id: 5328
Gene Symbol: PLAU
PLAU
0.020 AlteredExpression disease BEFREE Microdissection-based reverse transcriptase/polymerase chain reaction further confirmed upregulation of uPA and Plg and downregulation of PAI-1 message in LAM. 15514113 2005
Entrez Id: 5340
Gene Symbol: PLG
PLG
0.010 AlteredExpression disease BEFREE Microdissection-based reverse transcriptase/polymerase chain reaction further confirmed upregulation of uPA and Plg and downregulation of PAI-1 message in LAM. 15514113 2005
Entrez Id: 5054
Gene Symbol: SERPINE1
SERPINE1
0.010 AlteredExpression disease BEFREE Microdissection-based reverse transcriptase/polymerase chain reaction further confirmed upregulation of uPA and Plg and downregulation of PAI-1 message in LAM. 15514113 2005
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 GeneticVariation disease BEFREE A cell fraction separated by density gradient centrifugation from blood had TSC2 LOH in 33 of 60 (55%) LAM patients. 15583138 2004
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 Biomarker disease BEFREE Cumulatively, data presented here support the hypothesis that interactions between tuberin, ERalpha, and CaM may play a critical role in the pathology of LAM disease. 15851513 2005
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.020 AlteredExpression disease BEFREE Here, we show that beta-catenin and its effectors, cyclin D1 and connexin 43, were up-regulated in TSC-related angiomyolipomas and lymphangioleiomyomatosis. 15972957 2005
Entrez Id: 2697
Gene Symbol: GJA1
GJA1
0.010 AlteredExpression disease BEFREE Here, we show that beta-catenin and its effectors, cyclin D1 and connexin 43, were up-regulated in TSC-related angiomyolipomas and lymphangioleiomyomatosis. 15972957 2005
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 Biomarker disease BEFREE These data demonstrate that TSC2 controls cell migration through its N-terminus by associating with TSC1 and regulating RhoA activity, suggesting that TSC2 may play a critical role in modulating cell migration and invasiveness, which contributes to the pathobiology of LAM. 16388022 2006
Entrez Id: 7248
Gene Symbol: TSC1
TSC1
0.700 AlteredExpression disease BEFREE These data demonstrate that TSC2 controls cell migration through its N-terminus by associating with TSC1 and regulating RhoA activity, suggesting that TSC2 may play a critical role in modulating cell migration and invasiveness, which contributes to the pathobiology of LAM. 16388022 2006
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 Biomarker disease BEFREE The tumor suppressor genes TSC1 and TSC2 have been implicated in the etiology of LAM, as mutations and loss of heterozygosity (LOH) in TSC2 have been detected in LAM cells. 16457017 2005
Entrez Id: 1636
Gene Symbol: ACE
ACE
0.020 Biomarker disease BEFREE Angiotensin I-converting enzyme and chymase-producing mast cells were present within the LAM nodules. 16474096 2006
Entrez Id: 5972
Gene Symbol: REN
REN
0.020 Biomarker disease BEFREE To determine whether a LAM-specific renin-angiotensin system might play a role in the pathogenesis of LAM, we investigated the expression of genes and gene products of this system in LAM nodules. mRNA for angiotensinogen was present in RNA isolated by laser-captured microdissection from LAM nodules. 16474096 2006
Entrez Id: 183
Gene Symbol: AGT
AGT
0.010 Biomarker disease BEFREE Angiotensin II type 1 and type II receptors were identified in LAM cells by immunohistochemistry and immunoblotting of microdissected LAM nodules. 16474096 2006
Entrez Id: 2277
Gene Symbol: VEGFD
VEGFD
0.390 AlteredExpression disease LHGDN Only VEGF-D was significantly increased in LAM patients as compared with age- and gender-matched healthy volunteers (n=24) (LAM vs. control, geometric mean 95% CI; 1069.3 pg/mL (809.4 approximately 1412.6) vs. 295.9 pg/mL (262.6 approximately 333.5), p<0.0001). 17034294 2006
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 GeneticVariation disease BEFREE In this review we describe the evolution of our understanding of the molecular and cellular basis of LAM and TSC, beginning with the discovery of the TSC1 and TSC2 genes and the demonstration of their involvement in sporadic (non-TSC) LAM. 17099139 2007
Entrez Id: 7248
Gene Symbol: TSC1
TSC1
0.700 GeneticVariation disease BEFREE In this review we describe the evolution of our understanding of the molecular and cellular basis of LAM and TSC, beginning with the discovery of the TSC1 and TSC2 genes and the demonstration of their involvement in sporadic (non-TSC) LAM. 17099139 2007
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 Biomarker disease LHGDN Tuberin nuclear localization can be regulated by phosphorylation of its carboxyl terminus. 17114346 2006
Entrez Id: 8091
Gene Symbol: HMGA2
HMGA2
0.010 Biomarker disease BEFREE These results suggest that HMGA2 plays a central role in the pathogenesis of LAM and is a potential candidate as a therapeutic target. 17332316 2007
Entrez Id: 8091
Gene Symbol: HMGA2
HMGA2
0.010 Biomarker disease LHGDN These results suggest that HMGA2 plays a central role in the pathogenesis of LAM and is a potential candidate as a therapeutic target. 17332316 2007
Entrez Id: 10630
Gene Symbol: PDPN
PDPN
0.010 AlteredExpression disease LHGDN D2-40 labeling in lymphangiomyoma/lymphangiomyomatosis of the soft tissue: further evidence of lymphangiogenic tumor histogenesis. 17377811 2007
Entrez Id: 3447
Gene Symbol: IFNA13
IFNA13
0.010 Biomarker disease BEFREE Baseline median [interquartile range (IQR)] HBsAg levels in all patients were 3286 (1602-7458) IU/ml, not different between IFN- and LAM-treated (P = 0.139). 17503750 2007
Entrez Id: 3439
Gene Symbol: IFNA1
IFNA1
0.010 Biomarker disease BEFREE Baseline median [interquartile range (IQR)] HBsAg levels in all patients were 3286 (1602-7458) IU/ml, not different between IFN- and LAM-treated (P = 0.139). 17503750 2007
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 SomaticCausalMutation disease ORPHANET Pulmonary lymphangioleiomyomatosis (LAM): progress and current challenges. 17541983 2008