Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 780
Gene Symbol: DDR1
DDR1
0.010 AlteredExpression disease BEFREE To test the hypothesis that DDR may be involved in ECM remodeling by SMCs in vivo, we analyzed DDR expression by reverse transcriptase-polymerase chain reaction and immunohistochemistry and demonstrate that both DDR1 and DDR2 are up-regulated in nodules of LAM as compared to normal controls, and are expressed in lesions of atherosclerosis. 15111304 2004
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.010 AlteredExpression disease BEFREE Using laser microdissection, we extend our studies to the analysis of SMCs from LAM nodules where we observe higher MMP1 expression and MMP2 activation. 15111304 2004
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 Biomarker disease BEFREE The tumor suppressor genes TSC1 and TSC2 have been implicated in the etiology of LAM, as mutations and loss of heterozygosity (LOH) in TSC2 have been detected in LAM cells. 16457017 2005
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 Biomarker disease BEFREE Cumulatively, data presented here support the hypothesis that interactions between tuberin, ERalpha, and CaM may play a critical role in the pathology of LAM disease. 15851513 2005
Entrez Id: 6722
Gene Symbol: SRF
SRF
0.020 Biomarker disease BEFREE Imbalanced plasminogen system in lymphangioleiomyomatosis: potential role of serum response factor. 15514113 2005
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.020 AlteredExpression disease BEFREE Here, we show that beta-catenin and its effectors, cyclin D1 and connexin 43, were up-regulated in TSC-related angiomyolipomas and lymphangioleiomyomatosis. 15972957 2005
Entrez Id: 5328
Gene Symbol: PLAU
PLAU
0.020 AlteredExpression disease BEFREE Microdissection-based reverse transcriptase/polymerase chain reaction further confirmed upregulation of uPA and Plg and downregulation of PAI-1 message in LAM. 15514113 2005
Entrez Id: 2697
Gene Symbol: GJA1
GJA1
0.010 AlteredExpression disease BEFREE Here, we show that beta-catenin and its effectors, cyclin D1 and connexin 43, were up-regulated in TSC-related angiomyolipomas and lymphangioleiomyomatosis. 15972957 2005
Entrez Id: 5340
Gene Symbol: PLG
PLG
0.010 AlteredExpression disease BEFREE Microdissection-based reverse transcriptase/polymerase chain reaction further confirmed upregulation of uPA and Plg and downregulation of PAI-1 message in LAM. 15514113 2005
Entrez Id: 5054
Gene Symbol: SERPINE1
SERPINE1
0.010 AlteredExpression disease BEFREE Microdissection-based reverse transcriptase/polymerase chain reaction further confirmed upregulation of uPA and Plg and downregulation of PAI-1 message in LAM. 15514113 2005
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 Biomarker disease LHGDN Tuberin nuclear localization can be regulated by phosphorylation of its carboxyl terminus. 17114346 2006
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 Biomarker disease BEFREE These data demonstrate that TSC2 controls cell migration through its N-terminus by associating with TSC1 and regulating RhoA activity, suggesting that TSC2 may play a critical role in modulating cell migration and invasiveness, which contributes to the pathobiology of LAM. 16388022 2006
Entrez Id: 7248
Gene Symbol: TSC1
TSC1
0.700 AlteredExpression disease BEFREE These data demonstrate that TSC2 controls cell migration through its N-terminus by associating with TSC1 and regulating RhoA activity, suggesting that TSC2 may play a critical role in modulating cell migration and invasiveness, which contributes to the pathobiology of LAM. 16388022 2006
Entrez Id: 2277
Gene Symbol: VEGFD
VEGFD
0.390 AlteredExpression disease LHGDN Only VEGF-D was significantly increased in LAM patients as compared with age- and gender-matched healthy volunteers (n=24) (LAM vs. control, geometric mean 95% CI; 1069.3 pg/mL (809.4 approximately 1412.6) vs. 295.9 pg/mL (262.6 approximately 333.5), p<0.0001). 17034294 2006
Entrez Id: 1636
Gene Symbol: ACE
ACE
0.020 Biomarker disease BEFREE Angiotensin I-converting enzyme and chymase-producing mast cells were present within the LAM nodules. 16474096 2006
Entrez Id: 5972
Gene Symbol: REN
REN
0.020 Biomarker disease BEFREE To determine whether a LAM-specific renin-angiotensin system might play a role in the pathogenesis of LAM, we investigated the expression of genes and gene products of this system in LAM nodules. mRNA for angiotensinogen was present in RNA isolated by laser-captured microdissection from LAM nodules. 16474096 2006
Entrez Id: 183
Gene Symbol: AGT
AGT
0.010 Biomarker disease BEFREE Angiotensin II type 1 and type II receptors were identified in LAM cells by immunohistochemistry and immunoblotting of microdissected LAM nodules. 16474096 2006
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 Biomarker disease LHGDN [Pulmonary lymphangioleiomyomatosis with or without tuberous sclerosis]. 17632432 2007
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 GeneticVariation disease BEFREE In this review we describe the evolution of our understanding of the molecular and cellular basis of LAM and TSC, beginning with the discovery of the TSC1 and TSC2 genes and the demonstration of their involvement in sporadic (non-TSC) LAM. 17099139 2007
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 AlteredExpression disease BEFREE TSC2 loss in lymphangioleiomyomatosis cells correlated with expression of CD44v6, a molecular determinant of metastasis. 17975002 2007
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.800 GeneticVariation disease LHGDN TSC2 loss in lymphangioleiomyomatosis cells correlated with expression of CD44v6, a molecular determinant of metastasis. 17975002 2007
Entrez Id: 7248
Gene Symbol: TSC1
TSC1
0.700 GeneticVariation disease BEFREE In this review we describe the evolution of our understanding of the molecular and cellular basis of LAM and TSC, beginning with the discovery of the TSC1 and TSC2 genes and the demonstration of their involvement in sporadic (non-TSC) LAM. 17099139 2007
Entrez Id: 3479
Gene Symbol: IGF1
IGF1
0.020 Biomarker disease BEFREE The autocrine release of IGF-1 may therefore be a powerful mechanism of survival of the tightly packed cells in the thick-walled vessels of TSC angiomyolipoma and in lymphangioleiomyomatosis (LAM) nodules. 17592551 2007
Entrez Id: 3447
Gene Symbol: IFNA13
IFNA13
0.010 Biomarker disease BEFREE Baseline median [interquartile range (IQR)] HBsAg levels in all patients were 3286 (1602-7458) IU/ml, not different between IFN- and LAM-treated (P = 0.139). 17503750 2007
Entrez Id: 960
Gene Symbol: CD44
CD44
0.010 GeneticVariation disease LHGDN TSC2 loss in lymphangioleiomyomatosis cells correlated with expression of CD44v6, a molecular determinant of metastasis. 17975002 2007