Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6047
Gene Symbol: RNF4
RNF4
0.010 Biomarker disease BEFREE SUMOylation by SUMO2 is implicated in the degradation of misfolded ataxin-7 via RNF4 in SCA7 models. 30559154 2019
Entrez Id: 6315
Gene Symbol: ATXN8OS
ATXN8OS
0.010 Biomarker disease BEFREE Finally, the identification of the antisense RNAs SCAANT1-AS and ATXN8OS in spinocerebellar ataxia 7 and 8, respectively, suggests that very different mechanisms of action driven by lncRNAs may trigger neurodegeneration in these disorders. 27338628 2016
Entrez Id: 100861563
Gene Symbol: SCAANT1
SCAANT1
0.010 Biomarker disease BEFREE Finally, the identification of the antisense RNAs SCAANT1-AS and ATXN8OS in spinocerebellar ataxia 7 and 8, respectively, suggests that very different mechanisms of action driven by lncRNAs may trigger neurodegeneration in these disorders. 27338628 2016
Entrez Id: 27035
Gene Symbol: NOX1
NOX1
0.010 AlteredExpression disease BEFREE In this study we identified a previously unreported mechanism, involving disruption of p53 and NADPH oxidase 1 (NOX1) activity, by which the expanded SCA7 disease protein ATXN7 causes metabolic dysregulation. 25647692 2015
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.010 AlteredExpression disease BEFREE In this study we identified a previously unreported mechanism, involving disruption of p53 and NADPH oxidase 1 (NOX1) activity, by which the expanded SCA7 disease protein ATXN7 causes metabolic dysregulation. 25647692 2015
Entrez Id: 6908
Gene Symbol: TBP
TBP
0.010 Biomarker disease BEFREE Except for individuals with spinocerebellar ataxia type 1, age at onset was also influenced by other (CAG)n-containing genes: ATXN7 in spinocerebellar ataxia type 2; ATXN2, ATN1 and HTT in spinocerebellar ataxia type 3; ATXN1 and ATXN3 in spinocerebellar ataxia type 6; and ATXN3 and TBP in spinocerebellar ataxia type 7. 24972706 2014
Entrez Id: 3064
Gene Symbol: HTT
HTT
0.010 Biomarker disease BEFREE Except for individuals with spinocerebellar ataxia type 1, age at onset was also influenced by other (CAG)n-containing genes: ATXN7 in spinocerebellar ataxia type 2; ATXN2, ATN1 and HTT in spinocerebellar ataxia type 3; ATXN1 and ATXN3 in spinocerebellar ataxia type 6; and ATXN3 and TBP in spinocerebellar ataxia type 7. 24972706 2014
Entrez Id: 1822
Gene Symbol: ATN1
ATN1
0.010 Biomarker disease BEFREE Except for individuals with spinocerebellar ataxia type 1, age at onset was also influenced by other (CAG)n-containing genes: ATXN7 in spinocerebellar ataxia type 2; ATXN2, ATN1 and HTT in spinocerebellar ataxia type 3; ATXN1 and ATXN3 in spinocerebellar ataxia type 6; and ATXN3 and TBP in spinocerebellar ataxia type 7. 24972706 2014
Entrez Id: 3301
Gene Symbol: DNAJA1
DNAJA1
0.010 AlteredExpression disease BEFREE We further identified altered expression of two disease-relevant transcripts in SCA7 patient cells: a twofold increase in levels of the HSP DNAJA1 and a twofold decrease in levels of the de-ubiquitinating enzyme, UCHL1. 24667781 2014
Entrez Id: 9140
Gene Symbol: ATG12
ATG12
0.010 Biomarker disease BEFREE Interestingly, the expression of the early autophagy-associated gene ATG12 was increased in PBMC from SCA7 patients in correlation with disease severity. 24859968 2014
Entrez Id: 1509
Gene Symbol: CTSD
CTSD
0.010 Biomarker disease BEFREE Atypical accumulations of the autophagosome/lysosome markers LC3, LAMP-1, LAMP2 and cathepsin-D were also found in the cerebellum of the SCA7 knock-in mice. 24859968 2014
Entrez Id: 5168
Gene Symbol: ENPP2
ENPP2
0.010 GeneticVariation disease BEFREE H1152 also reduced protein level of HA-tagged polyglutamine-expanded ataxin-7-Q52 (ATX-7-Q52HA), which causes spinocerebellar ataxia type 7 (SCA7). 23347954 2013
Entrez Id: 8841
Gene Symbol: HDAC3
HDAC3
0.010 AlteredExpression disease BEFREE We detect robust HDAC3 expression in neurons and glia in the cerebellum and an increase in the levels of HDAC3 in SCA7 mice. 24160175 2013
Entrez Id: 23049
Gene Symbol: SMG1
SMG1
0.010 GeneticVariation disease BEFREE H1152 also reduced protein level of HA-tagged polyglutamine-expanded ataxin-7-Q52 (ATX-7-Q52HA), which causes spinocerebellar ataxia type 7 (SCA7). 23347954 2013
Entrez Id: 8408
Gene Symbol: ULK1
ULK1
0.010 Biomarker disease BEFREE Inhibition of autophagy via p53-mediated disruption of ULK1 in a SCA7 polyglutamine disease model. 23592174 2013
Entrez Id: 3456
Gene Symbol: IFNB1
IFNB1
0.010 AlteredExpression disease BEFREE We showed previously, in a cell model of spinocerebellar ataxia 7, that interferon beta induces the expression of PML protein and the formation of PML protein nuclear bodies that degrade mutant ataxin 7, suggesting that the cytokine, used to treat multiple sclerosis, might have therapeutic value in spinocerebellar ataxia 7. 23518714 2013
Entrez Id: 5371
Gene Symbol: PML
PML
0.010 Biomarker disease BEFREE We showed previously, in a cell model of spinocerebellar ataxia 7, that interferon beta induces the expression of PML protein and the formation of PML protein nuclear bodies that degrade mutant ataxin 7, suggesting that the cytokine, used to treat multiple sclerosis, might have therapeutic value in spinocerebellar ataxia 7. 23518714 2013
Entrez Id: 126006
Gene Symbol: PCP2
PCP2
0.010 Biomarker disease BEFREE When we prevented expression of mutant ataxin-7 in BG, PCs, and inferior olive by deriving Gfa2-Cre;Pcp2-Cre;PrP-floxed-SCA7-92Q BAC triple transgenic mice, we noted a dramatic improvement in SCA7 disease phenotypes. 22072678 2011
Entrez Id: 334
Gene Symbol: APLP2
APLP2
0.010 Biomarker disease BEFREE Our data suggest that the interaction between APLP2 and ataxin-7 and proteolytic processing of APLP2 may contribute to the pathogenesis of SCA7. 20732423 2011
Entrez Id: 5621
Gene Symbol: PRNP
PRNP
0.010 Biomarker disease BEFREE When we prevented expression of mutant ataxin-7 in BG, PCs, and inferior olive by deriving Gfa2-Cre;Pcp2-Cre;PrP-floxed-SCA7-92Q BAC triple transgenic mice, we noted a dramatic improvement in SCA7 disease phenotypes. 22072678 2011
Entrez Id: 7341
Gene Symbol: SUMO1
SUMO1
0.010 Biomarker disease BEFREE Furthermore, SUMO1 and SUMO2 colocalized with ATXN7 in a subset of neuronal intranuclear inclusions in the brain of SCA7 patients and SCA7 knock-in mice. 19843541 2010
Entrez Id: 6873
Gene Symbol: TAF2
TAF2
0.010 Biomarker disease BEFREE Polyglutamine (polyQ) expansion within the ataxin-7 protein, a member of the STAGA [SPT3-TAF(II)31-GCN5L acetylase] and TFTC (GCN5 and TRRAP) chromatin remodeling complexes, causes the neurodegenerative disease spinocerebellar ataxia type 7 (SCA7). 19955365 2009
Entrez Id: 8295
Gene Symbol: TRRAP
TRRAP
0.010 Biomarker disease BEFREE Polyglutamine (polyQ) expansion within the ataxin-7 protein, a member of the STAGA [SPT3-TAF(II)31-GCN5L acetylase] and TFTC (GCN5 and TRRAP) chromatin remodeling complexes, causes the neurodegenerative disease spinocerebellar ataxia type 7 (SCA7). 19955365 2009
Entrez Id: 8464
Gene Symbol: SUPT3H
SUPT3H
0.010 Biomarker disease BEFREE Polyglutamine (polyQ) expansion within the ataxin-7 protein, a member of the STAGA [SPT3-TAF(II)31-GCN5L acetylase] and TFTC (GCN5 and TRRAP) chromatin remodeling complexes, causes the neurodegenerative disease spinocerebellar ataxia type 7 (SCA7). 19955365 2009
Entrez Id: 55304
Gene Symbol: SPTLC3
SPTLC3
0.010 Biomarker disease BEFREE Polyglutamine (polyQ) expansion within the ataxin-7 protein, a member of the STAGA [SPT3-TAF(II)31-GCN5L acetylase] and TFTC (GCN5 and TRRAP) chromatin remodeling complexes, causes the neurodegenerative disease spinocerebellar ataxia type 7 (SCA7). 19955365 2009