Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1139
Gene Symbol: CHRNA7
CHRNA7
0.300 Biomarker disease CTD_human Prenatal ablation of nicotinic receptor alpha7 cell lineages produces lumbosacral spina bifida the severity of which is modified by choline and nicotine exposure. 22473653 2012
Entrez Id: 5125
Gene Symbol: PCSK5
PCSK5
0.300 Biomarker disease CTD_human VACTERL/caudal regression/Currarino syndrome-like malformations in mice with mutation in the proprotein convertase Pcsk5. 18519639 2008
Entrez Id: 4035
Gene Symbol: LRP1
LRP1
0.200 Biomarker disease MGD
Entrez Id: 1028
Gene Symbol: CDKN1C
CDKN1C
0.150 GeneticVariation disease BEFREE We studied 21 cases of isolated omphalocele detected during pregnancy or at birth and identified the following rare maternally inherited variants: i) the non-coding variant G > A at nucleotide 687 (NR_002728.3) at KCNQ1OT1:TSS-DMR, which alters the methylation pattern of the imprinted allele, in one patient; ii) the deletion c.624-629delGGCCCC at exon 1 of CDKN1C, with unknown clinical significance, in two unrelated cases. 29047350 2017
Entrez Id: 1028
Gene Symbol: CDKN1C
CDKN1C
0.150 GeneticVariation disease BEFREE ICR2 LOM and CDKN1C mutations were associated with a higher prevalence of exomphalos. 24335096 2013
Entrez Id: 1028
Gene Symbol: CDKN1C
CDKN1C
0.150 GeneticVariation disease BEFREE Genotype-phenotype correlation studies have demonstrated an association between omphalocoele and CDKN1C/p57 mutations or hypermethylation. 17259293 2007
Entrez Id: 1028
Gene Symbol: CDKN1C
CDKN1C
0.150 GeneticVariation disease BEFREE Hemihypertrophy was strongly associated with UPD (P<0.0001) and exomphalos was associated with an IC2 defect or CDKN1C mutation but not UPD or IC1 defect (P<0.0001). 15999116 2005
Entrez Id: 1028
Gene Symbol: CDKN1C
CDKN1C
0.150 GeneticVariation disease BEFREE This showed a significantly higher frequency of exomphalos in the CDKN1C mutation cases (11/13) than in patients with an imprinting centre defect (associated with biallelic IGF2 expression and H19 silencing) (0/5, p<0.005) or patients with uniparental disomy (0/9, p<0.005). 10424811 1999
Entrez Id: 1028
Gene Symbol: CDKN1C
CDKN1C
0.150 Biomarker disease HPO
Entrez Id: 2316
Gene Symbol: FLNA
FLNA
0.120 GeneticVariation disease BEFREE We did not find any mutations in exon 5 of FLNA in 179 omphalocele cases studied. 15378534 2004
Entrez Id: 2316
Gene Symbol: FLNA
FLNA
0.120 GeneticVariation disease BEFREE This is the second known instance of a male infant with omphalocele and this skeletal dysplasia born to a woman with MNS. 7158644 1982
Entrez Id: 2316
Gene Symbol: FLNA
FLNA
0.120 Biomarker disease HPO
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.110 GeneticVariation disease BEFREE Taken together, these findings suggest that KCNQ1OT1:TSS-DMR could be a susceptibility locus for the isolated omphalocele. 29047350 2017
Entrez Id: 3481
Gene Symbol: IGF2
IGF2
0.110 GeneticVariation disease BEFREE This showed a significantly higher frequency of exomphalos in the CDKN1C mutation cases (11/13) than in patients with an imprinting centre defect (associated with biallelic IGF2 expression and H19 silencing) (0/5, p<0.005) or patients with uniparental disomy (0/9, p<0.005). 10424811 1999
Entrez Id: 3481
Gene Symbol: IGF2
IGF2
0.110 Biomarker disease HPO
Entrez Id: 10984
Gene Symbol: KCNQ1OT1
KCNQ1OT1
0.110 Biomarker disease HPO
Entrez Id: 23426
Gene Symbol: GRIP1
GRIP1
0.100 Biomarker disease HPO
Entrez Id: 8626
Gene Symbol: TP63
TP63
0.100 Biomarker disease HPO
Entrez Id: 5048
Gene Symbol: PAFAH1B1
PAFAH1B1
0.100 Biomarker disease HPO
Entrez Id: 64840
Gene Symbol: PORCN
PORCN
0.100 Biomarker disease HPO
Entrez Id: 117581
Gene Symbol: TWIST2
TWIST2
0.100 Biomarker disease HPO
Entrez Id: 4638
Gene Symbol: MYLK
MYLK
0.100 Biomarker disease HPO
Entrez Id: 3670
Gene Symbol: ISL1
ISL1
0.100 Biomarker disease HPO
Entrez Id: 219844
Gene Symbol: HYLS1
HYLS1
0.100 Biomarker disease HPO
Entrez Id: 153241
Gene Symbol: CEP120
CEP120
0.100 Biomarker disease HPO