Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3356
Gene Symbol: HTR2A
HTR2A
0.030 Biomarker disease BEFREE Individual mutation of each of the five N-linked glycosylation sites did not affect the capacity of 5-HT(2A)R to support JCV infection and did not alter the cell surface expression of the receptor. 20660194 2010
Entrez Id: 3356
Gene Symbol: HTR2A
HTR2A
0.030 Biomarker disease BEFREE Serotonin receptor 2A blocker (risperidone) has no effect on human polyomavirus JC infection of primary human fetal glial cells. 18989819 2008
Entrez Id: 3356
Gene Symbol: HTR2A
HTR2A
0.030 Biomarker disease BEFREE HBMVE cells in vitro did not express serotonin receptor 2A (5HT(2A)R), and 5HT(2A)R blockers did not prevent JCV infection of HBMVE cells. 17399760 2007
Entrez Id: 5888
Gene Symbol: RAD51
RAD51
0.020 Biomarker disease BEFREE Thus Rad51 induction by JCV infection may provide positive feedback for viral activation early in JCV infection. 28202068 2017
Entrez Id: 5888
Gene Symbol: RAD51
RAD51
0.020 Biomarker disease BEFREE Immunohistochemistry on clinical samples of PML showed robust labeling for Rad51 in nuclei of bizarre astrocytes and inclusion body-bearing oligodendrocytes that are characteristic of JCV infection. 17368705 2007
Entrez Id: 29126
Gene Symbol: CD274
CD274
0.010 Biomarker disease BEFREE Our findings further indicate that regulatory plasma cells may regulate inflammatory T-cell activity via a PD-1/PD-L1 immuno-checkpoint pathway, thereby protecting the uninfected brain from excessive immune-mediated damage during an active JC virus infection. 30511098 2019
Entrez Id: 5595
Gene Symbol: MAPK3
MAPK3
0.010 Biomarker disease BEFREE ERK Is a Critical Regulator of JC Polyomavirus Infection. 29321332 2018
Entrez Id: 5371
Gene Symbol: PML
PML
0.010 Biomarker disease BEFREE He died at the age of 37 due to PML caused by JC virus infection. 28216420 2017
Entrez Id: 472
Gene Symbol: ATM
ATM
0.010 Biomarker disease BEFREE The role of DDR in JCV infection was analyzed using a small molecule inhibitor of ATM (KU-55933). 28202068 2017
Entrez Id: 8517
Gene Symbol: IKBKG
IKBKG
0.010 Biomarker disease BEFREE JCV infection caused a redistribution of NEMO from cytoplasm to nucleus. 28202068 2017
Entrez Id: 4292
Gene Symbol: MLH1
MLH1
0.010 Biomarker disease BEFREE Evidence for higher JC virus infection was shown among Europe-America-born Jews and Israeli Arabs. hMLH1 promoter methylation was evenly distributed between different ethnic groups in Israel. 20531010 2010
Entrez Id: 55768
Gene Symbol: NGLY1
NGLY1
0.010 Biomarker disease BEFREE Treatment of cells with PNGase F, to remove N-linked oligosaccharides from the cell surface, did not affect JCV infection in 5-HT(2A)R-expressing cells. 20660194 2010
Entrez Id: 4084
Gene Symbol: MXD1
MXD1
0.010 Biomarker disease BEFREE To assess the ability of a potent 5HT(2A)R blocker, risperidone, to inhibit JCV infection, the authors treated primary human fetal glial (PHFG) cells in vitro with risperidone for 24 h and inoculated with JCV(Mad1). 18989819 2008
Entrez Id: 1958
Gene Symbol: EGR1
EGR1
0.010 Biomarker disease BEFREE Early growth response-1 protein is induced by JC virus infection and binds and regulates the JC virus promoter. 18353421 2008
Entrez Id: 8379
Gene Symbol: MAD1L1
MAD1L1
0.010 Biomarker disease BEFREE To assess the ability of a potent 5HT(2A)R blocker, risperidone, to inhibit JCV infection, the authors treated primary human fetal glial (PHFG) cells in vitro with risperidone for 24 h and inoculated with JCV(Mad1). 18989819 2008
Entrez Id: 1653
Gene Symbol: DDX1
DDX1
0.010 Biomarker disease BEFREE Our findings indicate that an association between DDX1 and the JCV-TCR may play a significant role in JCV infection in IMR-32 cells. 17380053 2007
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.010 Biomarker disease BEFREE Our findings indicate that an association between DDX1 and the JCV-TCR may play a significant role in JCV infection in IMR-32 cells. 17380053 2007
Entrez Id: 4775
Gene Symbol: NFATC3
NFATC3
0.010 AlteredExpression disease BEFREE We found that CsA inhibited JCV infection by preventing the activation of the transcription factor nuclear factor of activated T cells 4 (NFAT4). 17035332 2006
Entrez Id: 3105
Gene Symbol: HLA-A
HLA-A
0.010 Biomarker disease BEFREE 71:115-123, 2003), our findings suggest a reinterpretation of this protective T-cell immunity, suggesting that the same VP1 epitope is recognized in HLA-A*02 persons in response to either BK or JC virus infection. 16103168 2005
Entrez Id: 4784
Gene Symbol: NFIX
NFIX
0.010 Biomarker disease BEFREE Several other cell lines tested that were permissive for JCV infection also showed synthesis of the NF-1/X class of proteins. 9123834 1997
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.010 Biomarker disease BEFREE This evidence of DNA amplification in PML glial cells is congruent with the functional abolition of p53 protein in association with JCV infection and lends further support to the role of p53 as a keeper of diploid status and guardian of genomic stability. 8642399 1996