Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3855
Gene Symbol: KRT7
KRT7
0.330 Biomarker disease BEFREE Among the most common useful stains are cytokeratin 7 (separating clear cell RCC [negative] from papillary RCC, clear cell papillary RCC, and multilocular cystic RCC [positive] as well as separating chromophobe RCC [diffusely positive] from oncocytoma [focally positive/negative]) and CD117 (separating chromophobe RCC and oncocytoma [positive] from granular variants of clear cell RCC [negative]). 30156770 2018
Entrez Id: 3855
Gene Symbol: KRT7
KRT7
0.330 Biomarker disease BEFREE Rare cytokeratin 7-positive cells (≤5%) were regarded as most supportive of oncocytoma, although an extent excluding oncocytoma was not universal. 28315424 2017
Entrez Id: 3855
Gene Symbol: KRT7
KRT7
0.330 Biomarker disease BEFREE In low-grade nonpapillary eosinophilic neoplasms, distinction between oncocytoma and low-grade RCC mostly rests on histomorphology; however, cytokeratin 7 immunostain may be helpful. 25357116 2014
Entrez Id: 3855
Gene Symbol: KRT7
KRT7
0.330 Biomarker disease CTD_human Both mRNA and protein expression levels of CK7 appear significantly higher in chromophobe RCC compared to oncocytoma (p < 0.001). 16927643 2006
Entrez Id: 5816
Gene Symbol: PVALB
PVALB
0.310 Biomarker disease CTD_human Diffuse parvalbumin expression was seen in all 41 of 41 (100%) chromophobe RCCs and only in 26 of 55 (47%) oncocytomas. 16927643 2006
Entrez Id: 5816
Gene Symbol: PVALB
PVALB
0.310 Biomarker disease BEFREE Vimentin was a sensitive, specific marker for conventional RCCs, and parvalbumin was detected primarily in chromophobe RCC/oncocytomas. 11337362 2001
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.050 Biomarker disease BEFREE Among the most common useful stains are cytokeratin 7 (separating clear cell RCC [negative] from papillary RCC, clear cell papillary RCC, and multilocular cystic RCC [positive] as well as separating chromophobe RCC [diffusely positive] from oncocytoma [focally positive/negative]) and CD117 (separating chromophobe RCC and oncocytoma [positive] from granular variants of clear cell RCC [negative]). 30156770 2018
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.050 AlteredExpression disease BEFREE LMO3 and S100B showed higher expression in oxyphilic adenoma and may be involve in parathyroid tumorgenesis through the p53 pathway. 28986304 2018
Entrez Id: 6271
Gene Symbol: S100A1
S100A1
0.050 Biomarker disease BEFREE Material from 12 female and 15 male patients (13 granular cell tumours of the sellar region, 10 pituicytomas, four spindle cell oncocytomas) collected in the German Registry of Pituitary Tumours between 1993 and 2015 was re-evaluated according to the current WHO classification of tumours of the central nervous system and supplementary immunohistochemistry including S100-protein, CD56, CD68, thyroid transcription factor-1 (TTF-1), and Ki-67 was performed. 27744503 2017
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.050 AlteredExpression disease BEFREE Oncocytomas activate 5' adenosine monophosphate-activated protein kinase (AMPK) and Tp53 (p53) and display disruption of Golgi and autophagy/lysosome trafficking, events attributed to defective mitochondrial function. 26655904 2015
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.050 GeneticVariation disease BEFREE Atg7 deficiency alters progression of Braf(V600E)-driven tumors from adenomas (Braf(V600E); atg7(-/-)) and adenocarcinomas (trp53(-/-); Braf(V600E); atg7(-/-)) to benign oncocytomas that accumulated morphologically and functionally defective mitochondria, suggesting that defects in mitochondrial metabolism may compromise continued tumor growth. 24362353 2014
Entrez Id: 6271
Gene Symbol: S100A1
S100A1
0.050 Biomarker disease BEFREE The potentially difficult differential diagnosis between chromophobe RCC and oncocytoma may be facilitated by S100A1 and CD82. 21204715 2011
Entrez Id: 6271
Gene Symbol: S100A1
S100A1
0.050 AlteredExpression disease BEFREE Statistical analyses comparing the different expression of S100A1 in clear cell and chromophobe renal cell carcinomas observed by immunohistochemical and RT-PCR methods showed significant values (P<0.001), such as when comparing by both techniques the different levels of S100A1 expression in chromophobe renal cell carcinomas and oncocytomas (P<0.001). 17483815 2007
Entrez Id: 6271
Gene Symbol: S100A1
S100A1
0.050 Biomarker disease BEFREE Nine oncocytomas showed strong immunoreactivity for S100A1. 17394501 2007
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.050 AlteredExpression disease BEFREE Renal chromophobe cell carcinomas (ChCC) and oncocytomas express KIT. 15998375 2005
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.050 AlteredExpression disease BEFREE KIT gene was expressed in 6/7 chromophobe RCCs and 7/8 oncocytomas while 0/15 clear cell RCCs and 1/15 papillary RCCs expressed kit gene. 15780567 2005
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.050 AlteredExpression disease BEFREE Immunohistochemical expression of KIT was found in most chromophobe RCCs (95% in TMAs and 96% in conventional sections) and oncocytomas (88% in TMAs and 100% in conventional sections) but was infrequently observed in renal angiomyolipomas (17%), papillary RCCs (5%), and clear-cell RCCs (3%). 15791570 2005
Entrez Id: 6271
Gene Symbol: S100A1
S100A1
0.050 AlteredExpression disease BEFREE Fifty-five tissue samples (15 clear cell RCCs, 15 papillary RCCs, 7 chromophobe RCCs, 8 oncocytomas and 10 normal renal tissues) were studied The gene expressions of S100A1 and KIT were analysed by one-step RT-PCR by using the specific primers. 15780567 2005
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.050 Biomarker disease BEFREE We found that 24 chromophobe RCCs (83%) and 5 renal oncocytomas (71%) revealed membranous immunoreactivity for KIT while none of the RCCs of other types expressed KIT immunohistochemically. 15198361 2004
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.050 Biomarker disease BEFREE The overexpression of bcl-2, but not p53 in oncocytoma, suggests that the MSP/Ron system sustains the growth of oncocytoma by opposing apoptosis. 12766581 2003
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.050 GeneticVariation disease BEFREE Mutations in the VHL gene were found in 54% of clear cell renal cell carcinomas (CCRCC) and in 18% of chromophilic cancers but in no chromophobe cancers or oncocytomas (P=0.016). 11536052 2001
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.050 GeneticVariation disease BEFREE Lack of VHL mutations and hypermethylations in chromophobe RCCs and oncocytomas was statistically significant (P = 0.0001 and P = 0.0004, respectively). 10766184 2000
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.050 GeneticVariation disease BEFREE Bilateral multiple renal oncocytomas and cysts associated with a constitutional translocation (8;9)(q24.1;q34.3) and a rare constitutional VHL missense substitution. 9523203 1998
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.050 GeneticVariation disease BEFREE Mutation of the p53 gene does occur in oncocytomas. 8659013 1996
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.050 GeneticVariation disease BEFREE Mutations in exon 2 of the VHL gene were detected in all three of the sporadic RCCs but were not observed in the matched normal renal tissues or in the two oncocytomas tested. 8871925 1996