Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 29974
Gene Symbol: A1CF
A1CF
0.010 GeneticVariation disease BEFREE Patients with GRIA1 rs4958351 AA/AG genotype showed significantly reduced risk to ASP hypersensitivity compared to patients with GG genotype in the T-cell ALL subgroup (OR = 0.05 (0.01-0.26); p = 4.70E-04), while no such association was found in pre-B-cell ALL. 26457809 2015
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.020 Biomarker disease BEFREE Only two cases of 13 B-precursor ALL had MDR1 mRNA, one of which had the Philadelphia (Ph1) chromosome. 7694687 1993
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.020 AlteredExpression disease BEFREE Thus, TEL/AML1 protein acts as a transcriptional repressor of MDR-1 gene expression, and although TEL/AML1 has been implicated in leukemogenesis, its effects on the MDR-1 gene may contribute to the excellent prognosis of TEL/AML1-positive ALL with current therapy. 15235109 2004
Entrez Id: 10058
Gene Symbol: ABCB6
ABCB6
0.010 Biomarker disease BEFREE In vivo blockade of NG2 using either chondroitinase-ABC or an anti-NG2-specific monoclonal antibody (MoAb) resulted in a significant mobilization of MLLr-B-ALL blasts from bone marrow (BM) to peripheral blood (PB) as demonstrated by cytometric and 3D confocal imaging analysis. 30635633 2019
Entrez Id: 10257
Gene Symbol: ABCC4
ABCC4
0.010 GeneticVariation disease BEFREE ABCC4 912T allele carriers (G/T and T/T genotypes) are associated with worse 3DFS in Pre-B cell ALL [P = 0.00019, OR (95% CI) = 13.17 (2.55-68.11)]. 28550450 2017
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE The degree of anemia was significantly different for three distinct groups of patients compared to the remaining patients (mean hemoglobin; T-cell leukemia: 106 g/L versus 76 g/L (precursor B-cell acute lymphoblastic leukemia); within precursor B-cell ALL: TEL-AML1 positive: 68 g/L versus 79 g/L; BCR-ABL positive: 93 g/L versus 76 g/L; each p<0.05). 18815194 2008
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE Screening for ABL1 chimeric genes could be performed in patients with ALL, more particularly in those with T-cell ALL because ABL1 modulates T-cell development and plays a role in cytoskeletal remodeling processes in T cells. 21435002 2011
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE A 74-year-old man was previously diagnosed with BCR-ABL1-positive pre-B cell acute lymphoblastic leukaemia (pre-B ALL) based on bone marrow cytology, flow cytometry, cytogenetics and fluorescent in situ hybridisation findings. 24729118 2014
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE Co-expression of CD66c(+) CD13(+) was more frequent in BCR/ABL1(+) B-ALL (29%) than BCR/ABL1(-) cases (4%) (P = 0.0044). 20666852 2011
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE However, it is unknown whether PTEN functions as a tumor suppressor in human Philadelphia chromosome-positive leukemia that includes chronic myeloid leukemia (CML) and B-cell acute lymphoblastic leukemia (B-ALL) and is induced by the BCR-ABL oncogene. 19965668 2010
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE We identified the chromatin-modifying protein CHD8 as necessary for cell survival in a mouse model of BCR-Abl+ B-cell acute lymphoblastic leukemia. 26588464 2015
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 AlteredExpression disease BEFREE We compared the activity of the ATP-competitive pan-PI3K inhibitor NVP-BKM120, the allosteric mTORC1 inhibitor RAD001, the ATP-competitive dual PI3K/mTORC1/C2 inhibitors NVP-BEZ235 and NVP-BGT226 and the combined mTORC1 and mTORC2 inhibitors Torin 1, PP242 and KU-0063794 using long-term cultures of ALL cells (ALL-LTC) from patients with B-precursor ALL that expressed the BCR-ABL or TEL-ABL oncoproteins or were BCR-ABL negative. 24244612 2013
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE The BCR-ABL1 fusion kinase is frequently associated with chronic myeloid leukemia and B-cell acute lymphoblastic leukemia but is rare in T-cell acute lymphoblastic leukemia (T-ALL). 15713800 2005
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE We review the literature where only 2 similar cases with normal karyotype Pre-B ALL and associated FISH BCR/ABL1 numerical abnormalities were found. 23098889 2013
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 GeneticVariation disease BEFREE BCR-ABL transcripts generated by the t(9;22) translocation were demonstrated in 36 patients (25%) and were restricted to the 109 patients with B precursor ALL (33% of this group). 9172811 1996
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE Inhibition of both SRC and BCR-ABL kinase activities by dasatinib affords complete B-ALL remission. 17077147 2006
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE Of BCR/ABL-positive patients, 83% had early pre-B ALL, one patient had pre-T ALL, while half of the BCR/ABL-negative patients had early pre-B ALL, 18% had CD10-negative pro-B ALL and 21% were pre-T. 9369422 1997
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE The present RCSD1-ABL1-positive ALL may represent a state of high chromosomal instability. 21863287 2011
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE Poor prognosis BCR-ABL and MLL-AF4 was detected in two-thirds of pediatric B-ALL and is likely to be the reason for the already reported poor survival of childhood ALL in South-East Asia. 26266519 2015
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 GeneticVariation disease BEFREE It is not clear how ABL1 deletion affects leukemogenesis; however, it is plausible that ABL1 deletion without BCR/ABL1 rearrangement is a rare but recurrent genetic abnormality in precursor B-ALL patients. 20082857 2010
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 AlteredExpression disease BEFREE In this prospective study, samples from 478 patients with CD10(+) B-cell precursor ALL (c-ALL and pre-B ALL) underwent BCR-ABL reverse transcription-polymerase chain reaction (RT-PCR) analysis with double testing of positive samples. 11861265 2002
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE Relapses and treatment-related events contributed equally to poor prognosis in children with ABL-class fusion positive B-cell acute lymphoblastic leukemia treated according to AIEOP-BFM protocols. 31601692 2019
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 AlteredExpression disease BEFREE Comparing genome-wide gene expression profiles of BCR-ABL1+ pre-B ALL and normal bone marrow pre-B cells by serial analysis of gene expression, many genes involved in pre-B cell receptor signaling are silenced in the leukemia cells. 14993251 2004
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 GeneticVariation disease BEFREE While expression of PTP4A1 and PTP4A2 remained relatively unchanged across diseases, PTP4A3 showed marked overexpression in ETV6-RUNX1 and BCR-ABL1 subtypes of precursor B cell acute lymphoblastic leukemia. 28063378 2017
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE The presence of the type A fusion transcript strongly implies ALL manifestation in ETV6/ABL1-positive hematologic malignancies as minor BCR breakpoint in BCR/ABL1-positive ALL. 23171811 2013