Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 613
Gene Symbol: BCR
BCR
0.400 Biomarker disease BEFREE ABL-class fusions other than BCR-ABL1 characterize about 2-3% of precursor B-cell acute lymphoblastic leukemia. 31601692 2019
Entrez Id: 613
Gene Symbol: BCR
BCR
0.400 Biomarker disease BEFREE Since γ-catenin was dispensable for normal hematopoiesis, these lineage- and disease-specific features of canonical Wnt signaling identified a potential therapeutic target for the treatment of BCR-ABL1<sup>+</sup> B-ALL. 30991025 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.400 GeneticVariation disease BEFREE These findings contribute to the knowledge of CDKN2A/2B and CRLF2 alterations and their prognostic value in B-ALL. 31228652 2019
Entrez Id: 5087
Gene Symbol: PBX1
PBX1
0.400 GeneticVariation disease BEFREE Flow cytometric predictive scoring systems for common fusions ETV6/RUNX1, BCR/ABL1, TCF3/PBX1 and rearrangements of the KMT2A gene, proposed for the initial cytogenetic approach in cases of B-acute lymphoblastic leukemia. 30730614 2019
Entrez Id: 4297
Gene Symbol: KMT2A
KMT2A
0.400 Biomarker disease BEFREE However, based on currently available data, we propose that consolidative HCT post-CART therapy be considered for all HCT-eligible patients and especially for pediatric patients with KMT2A-rearranged B-cell acute lymphoblastic leukemia. 30973486 2019
Entrez Id: 4297
Gene Symbol: KMT2A
KMT2A
0.400 Biomarker disease BEFREE MLL-rearranged (MLLr) B-ALL (MLLr-B-ALL) has, however, an unfavorable prognosis with common therapy refractoriness and early relapse, and therefore new therapeutic targets are needed for relapsed/refractory MLLr-B-ALL. 30635633 2019
Entrez Id: 3492
Gene Symbol: IGH
IGH
0.400 Biomarker disease BEFREE BCP first rearrange their immunoglobulin (Ig) heavy chain (IGH) genes to form the pre-B-cell receptor (pre-BCR) complex together with surrogate light chains. 31849931 2019
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE Relapses and treatment-related events contributed equally to poor prognosis in children with ABL-class fusion positive B-cell acute lymphoblastic leukemia treated according to AIEOP-BFM protocols. 31601692 2019
Entrez Id: 613
Gene Symbol: BCR
BCR
0.400 Biomarker disease BEFREE This manuscript highlights a clinically available alternative method for identifying a large subset of patients with BCR-ABL1-like B-ALL. 30181314 2019
Entrez Id: 4297
Gene Symbol: KMT2A
KMT2A
0.400 Biomarker disease BEFREE The pathogenesis of t(4;11)/KMT2A-AFF1<sup>+</sup> (MLL-AF4<sup>+</sup>) infant B-cell acute lymphoblastic leukemia remains difficult to model, and the pathogenic contribution in cancer of the reciprocal fusions resulting from derivative translocated-chromosomes remains obscure. 30679323 2019
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE The vast majority of BCR‑ABL1+ leukemic cells were found to be immature B cells with a variable proportion of pro‑B and pre‑B populations. 31173268 2019
Entrez Id: 613
Gene Symbol: BCR
BCR
0.400 Biomarker disease BEFREE The vast majority of BCR‑ABL1+ leukemic cells were found to be immature B cells with a variable proportion of pro‑B and pre‑B populations. 31173268 2019
Entrez Id: 2120
Gene Symbol: ETV6
ETV6
0.400 GeneticVariation disease BEFREE In this study, we examined the diagnostic (n = 77) and relapsed (n = 31) pediatric B-cell acute lymphoblastic leukemia (B-ALL) samples for the most common leukemia-associated gene variations CRLF2, JAK2, PAX5 and IL7R using deep sequencing and copy number alterations (CNAs) (CDKN2A/2B, PAX5, RB1, BTG1, ETV6, CSF2RA, IL3RA and CRLF2) by multiplex ligation proximity assay (MLPA), and evaluated for the clonal changes through relapse. 31228652 2019
Entrez Id: 5079
Gene Symbol: PAX5
PAX5
0.400 GeneticVariation disease BEFREE In this study, we examined the diagnostic (n = 77) and relapsed (n = 31) pediatric B-cell acute lymphoblastic leukemia (B-ALL) samples for the most common leukemia-associated gene variations CRLF2, JAK2, PAX5 and IL7R using deep sequencing and copy number alterations (CNAs) (CDKN2A/2B, PAX5, RB1, BTG1, ETV6, CSF2RA, IL3RA and CRLF2) by multiplex ligation proximity assay (MLPA), and evaluated for the clonal changes through relapse. 31228652 2019
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.400 Biomarker disease BEFREE This led to hypophosphorylation of MDM2<sup>Ser260</sup>, culminating in p53 stabilization and upregulation of BAX. shRNA knockdown or pharmacologic inhibition of PLK1 using BI2536 or BI6727 (volasertib) in B-ALL cell lines and patient samples led to p53 stabilization and cell death. 31227645 2019
Entrez Id: 4297
Gene Symbol: KMT2A
KMT2A
0.400 Biomarker disease BEFREE These findings uncover MLL-dependent transcriptional activation of BCL6 as a previously unrecognized requirement of malignant transformation by oncogenic MLL fusions and identified BCL6 as a novel target for the treatment of MLL-rearranged B-ALL. 31395741 2019
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.400 Biomarker disease BEFREE Deletion of CDKN2A/B is associated with inferior relapse free survival in pediatric B cell acute lymphoblastic leukemia. 29966470 2019
Entrez Id: 5087
Gene Symbol: PBX1
PBX1
0.400 AlteredExpression disease BEFREE Moreover, the binding of the E2A-PBX1 chimeric protein to the <i>BAFFR</i> promoter suggests that the transcriptional activator promotes the increase in <i>BAFFR</i> expression observed in about 50% of pre-B-ALL patients carrying the <i>t</i><sub>(1, 19)</sub> translocation. 31380267 2019
Entrez Id: 3492
Gene Symbol: IGH
IGH
0.400 GeneticVariation disease BEFREE Long-read sequencing unveils IGH-DUX4 translocation into the silenced IGH allele in B-cell acute lymphoblastic leukemia. 31243274 2019
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE The BCR-ABL1 fusion protein is the cause of chronic myeloid leukemia (CML) and of a significant fraction of adult-onset B cell acute lymphoblastic leukemia (B-ALL) cases. 30991025 2019
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.400 Biomarker disease BEFREE This manuscript highlights a clinically available alternative method for identifying a large subset of patients with BCR-ABL1-like B-ALL. 30181314 2019
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.400 Biomarker disease BEFREE TP53 Germline Variations Influence the Predisposition and Prognosis of B-Cell Acute Lymphoblastic Leukemia in Children. 29300620 2018
Entrez Id: 5087
Gene Symbol: PBX1
PBX1
0.400 AlteredExpression disease BEFREE The prognostic role of E2A-PBX1 expression detected by real-time quantitative reverse transcriptase polymerase chain reaction (RQ-PCR) in B cell acute lymphoblastic leukemia after allogeneic hematopoietic stem cell transplantation. 29705861 2018
Entrez Id: 613
Gene Symbol: BCR
BCR
0.400 GeneticVariation disease BEFREE We exclusively detect E1A-associated protein p300 (EP300)-ZNF384 in 5.7% of BCR-ABL1-negative adolescent/young adult (AYA)/adult pre-B-ALL patients. 29531323 2018
Entrez Id: 5079
Gene Symbol: PAX5
PAX5
0.400 Biomarker disease BEFREE PAX5-ELN oncoprotein promotes multistep B-cell acute lymphoblastic leukemia in mice. 30257940 2018