Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23498
Gene Symbol: HAAO
HAAO
0.300 Biomarker disease GENOMICS_ENGLAND NAD Deficiency, Congenital Malformations, and Niacin Supplementation. 28792876 2017
Entrez Id: 8942
Gene Symbol: KYNU
KYNU
0.300 Biomarker disease GENOMICS_ENGLAND NAD Deficiency, Congenital Malformations, and Niacin Supplementation. 28792876 2017
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.090 GeneticVariation disease BEFREE We report the first case of a newborn girl presenting with multiple congenital anomalies and a double mosaic trisomy involving chromosome 14 and the X chromosome detected by array CGH. 31786569 2019
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.090 Biomarker disease BEFREE Prematurity, ventricular septal defect and dysmorphisms are independent predictors of pathogenic copy number variants: a retrospective study on array-CGH results and phenotypical features of 293 children with neurodevelopmental disorders and/or multiple congenital anomalies. 29523172 2018
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.090 Biomarker disease BEFREE A selection bias for performing array-CGH in cases with multiple congenital malformations may have led to a high yield of CNVs. 28938747 2017
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.090 Biomarker disease BEFREE Thus, our results support the use of array-CGH replacing standard karyotype as the first-tier cytogenetic diagnostic test for patients with multiple congenital anomalies and/or intellectual disability. 26909975 2016
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.090 Biomarker disease BEFREE Array-CGH analysis in Rwandan patients presenting development delay/intellectual disability with multiple congenital anomalies. 25016475 2014
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.090 Biomarker disease BEFREE Based on our experiences, array-CGH is recommended as the first-step analysis in the genetic evaluation of patients with DD and/or MCA. 20486943 2011
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.090 Biomarker disease BEFREE Array-CGH has revealed a large number of copy number variations (CNVs) in patients with multiple congenital anomalies and/or mental retardation (MCA/MR). 19878743 2010
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.090 GeneticVariation disease BEFREE Using array CGH analysis, we have identified six overlapping microdeletions encompassing the FOX transcription factor gene cluster in chromosome 16q24.1q24.2 in patients with ACD/MPV and MCA. 19500772 2009
Entrez Id: 3342
Gene Symbol: HTC2
HTC2
0.090 Biomarker disease BEFREE Clinical utility of array CGH for the detection of chromosomal imbalances associated with mental retardation and multiple congenital anomalies. 19154522 2009
Entrez Id: 23556
Gene Symbol: PIGN
PIGN
0.040 GeneticVariation disease BEFREE Biallelic variants in PIGN, encoding phosphatidylinositol-glycan biosynthesis class N have been recently associated with multiple congenital anomalies hypotonia seizure syndrome. 29096607 2017
Entrez Id: 23556
Gene Symbol: PIGN
PIGN
0.040 GeneticVariation disease BEFREE Mutations in PIGN have been reported in cases with multiple congenital anomalies, including one case with syndromic CDH. 27038415 2016
Entrez Id: 23556
Gene Symbol: PIGN
PIGN
0.040 Biomarker disease BEFREE Genotype-phenotype correlation of congenital anomalies in multiple congenital anomalies hypotonia seizures syndrome (MCAHS1)/PIGN-related epilepsy. 26394714 2016
Entrez Id: 23556
Gene Symbol: PIGN
PIGN
0.040 GeneticVariation disease BEFREE Using exome sequencing we identify a homozygous splice site mutation in the PIGN gene in a foetus with multiple congenital anomalies including bilateral diaphragmatic hernia, cardiovascular anomalies, segmental renal dysplasia, facial dysmorphism, cleft palate, and oligodactyly. 24852103 2014
Entrez Id: 51604
Gene Symbol: PIGT
PIGT
0.030 Biomarker disease BEFREE Finally, we show that computer-assisted facial gestalt analysis accurately assigned PIGT cases to the multiple congenital anomalies-hypotonia-seizures syndrome phenotypic series advocating the additional use of next-generation phenotyping technology. 30976099 2019
Entrez Id: 51604
Gene Symbol: PIGT
PIGT
0.030 GeneticVariation disease BEFREE There have been previous reports of variants in the phosphatidylinositol glycan anchor biosynthesis class T (PIGT) gene associated with multiple congenital anomalies, with a total of 14 affected individuals across 8 families. 30813157 2019
Entrez Id: 55636
Gene Symbol: CHD7
CHD7
0.030 GeneticVariation disease BEFREE CHARGE syndrome (OMIM 214800) is a rare autosomal-dominant congenital malformation syndrome that results from haploinsufficiency of the chromodomain helicase DNA-binding protein 7 (CHD7). 26538304 2016
Entrez Id: 51604
Gene Symbol: PIGT
PIGT
0.030 GeneticVariation disease BEFREE These results indicate that PIGT mutations caused neurological impairment and multiple congenital anomalies in this patient. 24906948 2014
Entrez Id: 55636
Gene Symbol: CHD7
CHD7
0.030 GeneticVariation disease BEFREE CHARGE syndrome is a rare, usually sporadic disorder of multiple congenital anomalies ascribed to a CHD7 gene mutation in 60% of cases. 23024289 2012
Entrez Id: 55636
Gene Symbol: CHD7
CHD7
0.030 GeneticVariation disease BEFREE The CHARGE syndrome is a multiple congenital malformation syndrome that usually results from deletion or heterozygous loss of function mutations of the chromodomain helicase DNA-binding protein 7 (CHD7) gene at 8q12.1. 21094707 2011
Entrez Id: 2033
Gene Symbol: EP300
EP300
0.020 GeneticVariation disease BEFREE Rubinstein-Taybi syndrome (RSTS) is a multiple congenital anomalies syndrome associated with mutations in CREBBP (70%) and EP300 (5-10%). 29359884 2018
Entrez Id: 2719
Gene Symbol: GPC3
GPC3
0.020 GeneticVariation disease BEFREE Simpson-Golabi-Behmel syndrome (SGBS) is an X-linked multiple congenital anomalies and overgrowth syndrome caused by a defect in the glypican-3 gene (GPC3). 29637653 2018
Entrez Id: 1387
Gene Symbol: CREBBP
CREBBP
0.020 GeneticVariation disease BEFREE Rubinstein-Taybi syndrome (RSTS) is a multiple congenital anomalies syndrome associated with mutations in CREBBP (70%) and EP300 (5-10%). 29359884 2018
Entrez Id: 2033
Gene Symbol: EP300
EP300
0.020 GeneticVariation disease BEFREE The genetic basis of Rubinstein-Taybi syndrome (RSTS), a rare, sporadic, clinically heterogeneous disorder characterized by cognitive impairment and a wide spectrum of multiple congenital anomalies, is primarily due to private mutations in CREBBP (approximately 55% of cases) or EP300 (approximately 8% of cases). 25388907 2015