Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 8878
Gene Symbol: SQSTM1
SQSTM1
0.010 AlteredExpression phenotype BEFREE CCL2 expression in primary carcinoma tissues also correlated well with SQSTM1 expression. 29989092 2018
Entrez Id: 6347
Gene Symbol: CCL2
CCL2
0.010 AlteredExpression phenotype BEFREE CCL2 expression in primary carcinoma tissues also correlated well with SQSTM1 expression. 29989092 2018
Entrez Id: 1301
Gene Symbol: COL11A1
COL11A1
0.010 Biomarker phenotype BEFREE Using COL11A1 as a 'seed', we identified co-expressed genes in 13 types of primary carcinoma in The Cancer Genome Atlas. 27609069 2016
Entrez Id: 489
Gene Symbol: ATP2A3
ATP2A3
0.010 AlteredExpression phenotype BEFREE In contrast, primary carcinoma showed high SERCA3 expression when compared to that in metastatic carcinoma in lymph node or liver by IHC (P<0.05). 24213720 2014
Entrez Id: 23532
Gene Symbol: PRAME
PRAME
0.010 AlteredExpression phenotype BEFREE PRAME levels in müllerian carcinoma were unrelated to survival; however, PRAME protein expression was up-regulated in solid metastases compared with primary carcinoma and effusions (P < .001). 22261449 2012
Entrez Id: 23326
Gene Symbol: USP22
USP22
0.010 AlteredExpression phenotype BEFREE Nuclear USP22 expression significantly increased from normal mucosa through adenoma to primary carcinoma (P < 0.0001) and from primary carcinoma to liver metastasis (P = 0.021). 21337558 2011
Entrez Id: 407006
Gene Symbol: MIR221
MIR221
0.010 AlteredExpression phenotype BEFREE Downregulation of miR-221 was negatively correlated with the expression of the proto-oncogen c-kit in primary carcinoma. 19585579 2010
Entrez Id: 6275
Gene Symbol: S100A4
S100A4
0.010 AlteredExpression phenotype BEFREE Tumor cell nuclear S100A4 expression is higher in solid tumors than in effusions, and is associated with more aggressive clinical disease in primary carcinoma, suggesting that the tumor-promoting role of this molecule is predominantly exerted at this anatomic site. 19194111 2009
Entrez Id: 4089
Gene Symbol: SMAD4
SMAD4
0.010 Biomarker phenotype BEFREE DPC4 gene status of the primary carcinoma correlates with patterns of failure in patients with pancreatic cancer. 19273710 2009
Entrez Id: 2735
Gene Symbol: GLI1
GLI1
0.010 Biomarker phenotype BEFREE The Gli1 nuclear staining percentage of metastatic lymph nodes correlated closely with that of each primary carcinoma. 17192867 2007
Entrez Id: 4982
Gene Symbol: TNFRSF11B
TNFRSF11B
0.010 GeneticVariation phenotype BEFREE Analysis of surgical biopsy specimens showed the expression of RANKL (31%), RANK (38%), and OPG (19%) in primary carcinoma. 16752412 2006
Entrez Id: 2463
Gene Symbol: FRA16D
FRA16D
0.010 Biomarker phenotype BEFREE Identical FRA16D deletions in two cell lines (one derived from the primary carcinoma and the other from a secondary metastasis) demonstrate that FRA16D DNA instability can be an early, transient event. 15814586 2005
Entrez Id: 4292
Gene Symbol: MLH1
MLH1
0.010 PosttranslationalModification phenotype BEFREE We examined microsatellite instability (MSI) status, frameshift mutation in target genes of MSI, mismatch repair protein expression and hypermethylation of the hMLH1 promoter region in ECOPC patients to better understand the underlying carcinogenic processes. 15540218 2005
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.010 GeneticVariation phenotype BEFREE Overexpression of p53 protein and point mutation of K-ras genes in primary carcinoma of the small intestine. 11836595 2002
Entrez Id: 4316
Gene Symbol: MMP7
MMP7
0.010 AlteredExpression phenotype BEFREE Interestingly, among the matrix metalloproteinase family, only MMP7 was identified as a differentially overexpressed gene in both the primary carcinoma and the metastatic cells in comparison with the normal cells. 11821786 2002
Entrez Id: 8743
Gene Symbol: TNFSF10
TNFSF10
0.010 AlteredExpression phenotype BEFREE TIL in primary carcinoma showed a very low level of expression of TRAIL/its receptors and TUNEL-positive cells. 11862476 2002
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.010 Biomarker phenotype BEFREE All patients that expressed EGFR transcripts in the peripheral blood were found to express the EGFR protein in the corresponding primary carcinoma, as assessed by immunohistochemistry. 10778975 2000
Entrez Id: 1191
Gene Symbol: CLU
CLU
0.010 AlteredExpression phenotype BEFREE Clusterin expression was associated with large tumor size (P = 0.04), estrogen and progesterone receptor negative status (P = 0.02 and P = 0.001, respectively) and with the progression from primary carcinoma to metastatic carcinoma in lymph nodes (80% metastatic nodes had positive expression) (P = 0.004). 10934144 2000
Entrez Id: 5241
Gene Symbol: PGR
PGR
0.010 Biomarker phenotype BEFREE Clusterin expression was associated with large tumor size (P = 0.04), estrogen and progesterone receptor negative status (P = 0.02 and P = 0.001, respectively) and with the progression from primary carcinoma to metastatic carcinoma in lymph nodes (80% metastatic nodes had positive expression) (P = 0.004). 10934144 2000
Entrez Id: 1832
Gene Symbol: DSP
DSP
0.010 Biomarker phenotype BEFREE Two constitutive desmosomal molecules, desmoplakin (Dp) and plakoglobin (Pg), were examined in 26 samples of primary carcinoma of the head and neck. 10424382 1999
Entrez Id: 472
Gene Symbol: ATM
ATM
0.010 Biomarker phenotype BEFREE The protein truncation test was used to screen for mutations in the ATM gene in those patients who had greatly reduced ATM protein immunoreactivity in the primary carcinoma (n = 3). 10748873 1999
Entrez Id: 3713
Gene Symbol: IVL
IVL
0.010 AlteredExpression phenotype BEFREE Some of the cells in the primary carcinoma and in the metastatic lymph node expressed involucrin at increased levels. 7850071 1994
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.020 GeneticVariation phenotype BEFREE Expression of the BRAF V600E mutant protein was detected in all of 59 cases of primary carcinoma and corresponding metastatic carcinoma in lymph nodes. 26795218 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.020 GeneticVariation phenotype BEFREE Genetic heterogeneity of BRAF was studied by comparing the mutation status in different samples of tumor as follows: (a) 2 separate areas (each >1.5 cm in diameter) within the primary tumor, (b) a more than 1.5 cm area of primary carcinoma and a second 5 mm area simulating a fine needle aspiration sample from a different portion of the primary tumor, (c) primary carcinoma and its lymph node metastasis at thyroidectomy, (d) primary carcinoma and the recurrent metastasis, and (e) differentiated and anaplastic areas in the primary carcinoma. 24746198 2014
Entrez Id: 2064
Gene Symbol: ERBB2
ERBB2
0.020 Biomarker phenotype BEFREE GH was maintained in the concurrent lymph node metastases with some variations; however, two cases with clusters of HER2 amplified cells in the primary carcinoma showed HER2 amplification in the nodal metastasis. 23539740 2013