Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.060 GeneticVariation phenotype BEFREE Overexpression of p53 protein and point mutation of K-ras genes in primary carcinoma of the small intestine. 11836595 2002
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.060 GeneticVariation phenotype BEFREE In contrast, the functional assay permitted us to detect p53 mutations in 66% of patients with stage T1 tumors (72% of case of high grade 3) and in all cases with primary carcinoma in situ and in 4 cases of stage T2 tumors. 10332483 1999
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.060 GeneticVariation phenotype BEFREE In a patient with esophageal squamous cell carcinoma, we sequenced all the p53 cDNA translated regions (exon 2-10) of primary carcinoma, and confirmed one p53 nonsense mutation in exon 10. 10071815 1998
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.060 GeneticVariation phenotype BEFREE Sequence analysis did not identify any p53 mutations in the primary carcinoma or its metastases. 9655301 1998
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.060 Biomarker phenotype BEFREE Detection of cellular heterogeneity by DNA ploidy, 17 chromosome, and p53 gene in primary carcinoma and metastasis in a case of ovarian cancer. 8852451 1996
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.060 Biomarker phenotype BEFREE No normal thyroid tissues or primary tumors from which the cell lines were derived demonstrated exon 8 mutations, using this technique. p53 immunocytochemistry demonstrated a progression of p53 immunopositivity between synchronous and metachronous neoplasms, paralleling the neoplastic progression from a benign adenoma to primary carcinoma, regional, and distant metastasis and ultimately, the cell lines, where intense immunopositivity is noted. 8855792 1996
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.020 GeneticVariation phenotype BEFREE Expression of the BRAF V600E mutant protein was detected in all of 59 cases of primary carcinoma and corresponding metastatic carcinoma in lymph nodes. 26795218 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.020 GeneticVariation phenotype BEFREE Genetic heterogeneity of BRAF was studied by comparing the mutation status in different samples of tumor as follows: (a) 2 separate areas (each >1.5 cm in diameter) within the primary tumor, (b) a more than 1.5 cm area of primary carcinoma and a second 5 mm area simulating a fine needle aspiration sample from a different portion of the primary tumor, (c) primary carcinoma and its lymph node metastasis at thyroidectomy, (d) primary carcinoma and the recurrent metastasis, and (e) differentiated and anaplastic areas in the primary carcinoma. 24746198 2014
Entrez Id: 2064
Gene Symbol: ERBB2
ERBB2
0.020 Biomarker phenotype BEFREE GH was maintained in the concurrent lymph node metastases with some variations; however, two cases with clusters of HER2 amplified cells in the primary carcinoma showed HER2 amplification in the nodal metastasis. 23539740 2013
Entrez Id: 2064
Gene Symbol: ERBB2
ERBB2
0.020 Biomarker phenotype BEFREE Sixty-six patients with HER2-positive primary carcinoma and paired metastasis were evaluated. 21239403 2011
Entrez Id: 8878
Gene Symbol: SQSTM1
SQSTM1
0.010 AlteredExpression phenotype BEFREE CCL2 expression in primary carcinoma tissues also correlated well with SQSTM1 expression. 29989092 2018
Entrez Id: 6347
Gene Symbol: CCL2
CCL2
0.010 AlteredExpression phenotype BEFREE CCL2 expression in primary carcinoma tissues also correlated well with SQSTM1 expression. 29989092 2018
Entrez Id: 1301
Gene Symbol: COL11A1
COL11A1
0.010 Biomarker phenotype BEFREE Using COL11A1 as a 'seed', we identified co-expressed genes in 13 types of primary carcinoma in The Cancer Genome Atlas. 27609069 2016
Entrez Id: 489
Gene Symbol: ATP2A3
ATP2A3
0.010 AlteredExpression phenotype BEFREE In contrast, primary carcinoma showed high SERCA3 expression when compared to that in metastatic carcinoma in lymph node or liver by IHC (P<0.05). 24213720 2014
Entrez Id: 23532
Gene Symbol: PRAME
PRAME
0.010 AlteredExpression phenotype BEFREE PRAME levels in müllerian carcinoma were unrelated to survival; however, PRAME protein expression was up-regulated in solid metastases compared with primary carcinoma and effusions (P < .001). 22261449 2012
Entrez Id: 23326
Gene Symbol: USP22
USP22
0.010 AlteredExpression phenotype BEFREE Nuclear USP22 expression significantly increased from normal mucosa through adenoma to primary carcinoma (P < 0.0001) and from primary carcinoma to liver metastasis (P = 0.021). 21337558 2011
Entrez Id: 407006
Gene Symbol: MIR221
MIR221
0.010 AlteredExpression phenotype BEFREE Downregulation of miR-221 was negatively correlated with the expression of the proto-oncogen c-kit in primary carcinoma. 19585579 2010
Entrez Id: 6275
Gene Symbol: S100A4
S100A4
0.010 AlteredExpression phenotype BEFREE Tumor cell nuclear S100A4 expression is higher in solid tumors than in effusions, and is associated with more aggressive clinical disease in primary carcinoma, suggesting that the tumor-promoting role of this molecule is predominantly exerted at this anatomic site. 19194111 2009
Entrez Id: 4089
Gene Symbol: SMAD4
SMAD4
0.010 Biomarker phenotype BEFREE DPC4 gene status of the primary carcinoma correlates with patterns of failure in patients with pancreatic cancer. 19273710 2009
Entrez Id: 2735
Gene Symbol: GLI1
GLI1
0.010 Biomarker phenotype BEFREE The Gli1 nuclear staining percentage of metastatic lymph nodes correlated closely with that of each primary carcinoma. 17192867 2007
Entrez Id: 4982
Gene Symbol: TNFRSF11B
TNFRSF11B
0.010 GeneticVariation phenotype BEFREE Analysis of surgical biopsy specimens showed the expression of RANKL (31%), RANK (38%), and OPG (19%) in primary carcinoma. 16752412 2006
Entrez Id: 2463
Gene Symbol: FRA16D
FRA16D
0.010 Biomarker phenotype BEFREE Identical FRA16D deletions in two cell lines (one derived from the primary carcinoma and the other from a secondary metastasis) demonstrate that FRA16D DNA instability can be an early, transient event. 15814586 2005
Entrez Id: 4292
Gene Symbol: MLH1
MLH1
0.010 PosttranslationalModification phenotype BEFREE We examined microsatellite instability (MSI) status, frameshift mutation in target genes of MSI, mismatch repair protein expression and hypermethylation of the hMLH1 promoter region in ECOPC patients to better understand the underlying carcinogenic processes. 15540218 2005
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.010 GeneticVariation phenotype BEFREE Overexpression of p53 protein and point mutation of K-ras genes in primary carcinoma of the small intestine. 11836595 2002
Entrez Id: 4316
Gene Symbol: MMP7
MMP7
0.010 AlteredExpression phenotype BEFREE Interestingly, among the matrix metalloproteinase family, only MMP7 was identified as a differentially overexpressed gene in both the primary carcinoma and the metastatic cells in comparison with the normal cells. 11821786 2002