Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 56244
Gene Symbol: BTNL2
BTNL2
0.110 GeneticVariation disease GWASCAT A genome-wide association study of marginal zone lymphoma shows association to the HLA region. 25569183 2015
Entrez Id: 56244
Gene Symbol: BTNL2
BTNL2
0.110 GeneticVariation disease BEFREE Here we perform a two-stage GWAS of 1,281 MZL cases and 7,127 controls of European ancestry and identify two independent loci near BTNL2 (rs9461741, P=3.95 × 10(-15)) and HLA-B (rs2922994, P=2.43 × 10(-9)) in the HLA region significantly associated with MZL risk. 25569183 2015
Entrez Id: 81671
Gene Symbol: VMP1
VMP1
0.100 GeneticVariation disease GWASCAT Genetic overlap between autoimmune diseases and non-Hodgkin lymphoma subtypes. 31407831 2019
Entrez Id: 26259
Gene Symbol: FBXW8
FBXW8
0.100 GeneticVariation disease GWASCAT Genetic overlap between autoimmune diseases and non-Hodgkin lymphoma subtypes. 31407831 2019
Entrez Id: 57178
Gene Symbol: ZMIZ1
ZMIZ1
0.100 GeneticVariation disease GWASCAT Genetic overlap between autoimmune diseases and non-Hodgkin lymphoma subtypes. 31407831 2019
Entrez Id: 4249
Gene Symbol: MGAT5
MGAT5
0.100 GeneticVariation disease GWASCAT Genetic overlap between autoimmune diseases and non-Hodgkin lymphoma subtypes. 31407831 2019
Entrez Id: 57727
Gene Symbol: NCOA5
NCOA5
0.100 GeneticVariation disease GWASCAT Genetic overlap between autoimmune diseases and non-Hodgkin lymphoma subtypes. 31407831 2019
Entrez Id: 3559
Gene Symbol: IL2RA
IL2RA
0.100 GeneticVariation disease GWASCAT Genetic overlap between autoimmune diseases and non-Hodgkin lymphoma subtypes. 31407831 2019
Entrez Id: 8997
Gene Symbol: KALRN
KALRN
0.100 GeneticVariation disease GWASCAT Genetic overlap between autoimmune diseases and non-Hodgkin lymphoma subtypes. 31407831 2019
Entrez Id: 22806
Gene Symbol: IKZF3
IKZF3
0.100 GeneticVariation disease GWASCAT Genetic overlap between autoimmune diseases and non-Hodgkin lymphoma subtypes. 31407831 2019
Entrez Id: 101929163
Gene Symbol: TSBP1-AS1
TSBP1-AS1
0.100 GeneticVariation disease GWASCAT A genome-wide association study of marginal zone lymphoma shows association to the HLA region. 25569183 2015
Entrez Id: 140685
Gene Symbol: ZBTB46
ZBTB46
0.100 GeneticVariation disease GWASCAT Genetic overlap between autoimmune diseases and non-Hodgkin lymphoma subtypes. 31407831 2019
Entrez Id: 4615
Gene Symbol: MYD88
MYD88
0.070 GeneticVariation disease BEFREE The diagnosis of Waldenström Macroglobulinaemia (WM)/lymphoplasmacytic lymphoma (LPL) remains one of exclusion because other B-cell lymphoproliferative disorders (B-LPD), such as marginal zone lymphoma (MZL), can fulfil similar criteria, including MYD88 L265P mutation. 30198568 2019
Entrez Id: 4615
Gene Symbol: MYD88
MYD88
0.070 GeneticVariation disease BEFREE MYD88 L265P was found in 49/51 (96%) LPL cases and in 1/13 (7·6%) MZL (splenic type), whereas all CLL samples remained negative. 25819228 2015
Entrez Id: 4615
Gene Symbol: MYD88
MYD88
0.070 GeneticVariation disease BEFREE IGHV gene features and MYD88 L265P mutation separate the three marginal zone lymphoma entities and Waldenström macroglobulinemia/lymphoplasmacytic lymphomas. 22944768 2013
Entrez Id: 4615
Gene Symbol: MYD88
MYD88
0.070 GeneticVariation disease BEFREE The most distinguishing features of LPL with respect to MZL were focal paratrabecular involvement (P < .001), the presence of lymphoplasmacytoid cells (P < .001) and Dutcher bodies (P < .001), increased numbers of mast cells (P < .001), and the MYD88 L265P mutation (P < .001). 25972321 2015
Entrez Id: 4615
Gene Symbol: MYD88
MYD88
0.070 GeneticVariation disease BEFREE MYD88 (L265P) somatic mutation in marginal zone B-cell lymphoma. 25723115 2015
Entrez Id: 4615
Gene Symbol: MYD88
MYD88
0.070 GeneticVariation disease BEFREE The immunophenotypic features and myeloid differentiation primary response gene (88) leucine to proline mutation data of LGBCL-NOS suggested that some cases present with characteristics similar to those of LPL or marginal zone lymphoma. 24767771 2014
Entrez Id: 4615
Gene Symbol: MYD88
MYD88
0.070 GeneticVariation disease BEFREE Thus, pyrosequencing for the MYD88 L265P mutation demonstrates a high clinical sensitivity and specificity to distinguish LPL from MZL and CLL. 26230596 2015
Entrez Id: 604
Gene Symbol: BCL6
BCL6
0.060 GeneticVariation disease BEFREE i) Besides +3 and 7q-, 13q14 deletion, total/partial +12, BCL6 rearrangement, and deletions at 6q21, 11q22-23, and 17p13.3 are relatively frequent events in MZBCL; ii) unlike in mantle cell lymphoma, 9p21 deletion occurred infrequently in MZBCL; iii) a switch into high grade histology is usually associated with complex chromosome defects, including 6q-, 11q-, +12, and 17p. 11146573 2001
Entrez Id: 604
Gene Symbol: BCL6
BCL6
0.060 GeneticVariation disease BEFREE The most common scenario is transformation of follicular lymphoma to either diffuse large B-cell lymphoma or high-grade B-cell lymphoma with MYC and BCL2 and/or BCL6 translocations; however, other indolent subtypes such as marginal zone lymphoma, lymphoplasmacytic lymphoma, small lymphocytic lymphoma/chronic lymphocytic leukemia, or even nodular lymphocyte predominant Hodgkin lymphoma, can undergo similar histologic transformation. 30213394 2018
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.060 GeneticVariation disease BEFREE First, 2 cases, one case of MALT lymphoma and another of aggressive marginal zone lymphoma (MZL) with t(14;18)(q32;q21), cytogenetically identical to the translocation involving BCL2, were shown by fluorescence in situ hybridization (FISH) to involve MALT1, which lies about 5 Mb centromeric of BCL2. 12560219 2003
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.060 GeneticVariation disease BEFREE Two patients with FSCCL, 22 patients with DSCCL, and all of the patients with MZL had a phenotype of mantle zone (MZ) B-lymphocytes (SIgD+, Leu-1+, Leu-8+, positive alkaline phosphatase [ALPase+], and negative common acute lymphoblastic leukemia antigen [CALLA-]), and all the tested patients (2 patients with FSCCL, 13 patients with DSCCL, and 4 patients with MZL) had germlines of bcl-2 gene. 1643614 1992
Entrez Id: 10892
Gene Symbol: MALT1
MALT1
0.050 GeneticVariation disease BEFREE The translocation of chromosome 11, long arm, region 2, band 1, to chromosome 18, long arm, region 2, band 1 (t(11;18)(q21;q21)) represents a recurrent chromosomal abnormality in extranodal marginal zone B-cell lymphoma (MZBCL) of mucosa-associated lymphoid tissue (MALT) type and leads to a fusion of the apoptosis inhibitor-2 (API2) gene on chromosome 11 and the MALT lymphoma-associated translocation (MLT) gene on chromosome 18. 10979968 2000
Entrez Id: 7128
Gene Symbol: TNFAIP3
TNFAIP3
0.050 GeneticVariation disease BEFREE The mutational landscape of ocular marginal zone lymphoma identifies frequent alterations in TNFAIP3 followed by mutations in TBL1XR1 and CREBBP. 28152507 2017