Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6886
Gene Symbol: TAL1
TAL1
0.080 GeneticVariation disease BEFREE The stem cell leukemia (Scl or Tal1) protein forms part of a multimeric transcription factor complex required for normal megakaryopoiesis. 31300405 2019
Entrez Id: 6886
Gene Symbol: TAL1
TAL1
0.080 GeneticVariation disease BEFREE The interstitial deletion at 1p32 involving SIL (SCL-interrupting locus)/SCL (stem cell leukemia) is a case involving two non-V(D)J sites that have been suggested to be V(D)J recombination mistakes. 11390401 2001
Entrez Id: 6886
Gene Symbol: TAL1
TAL1
0.080 GeneticVariation disease BEFREE The SCL gene, initially discovered at the site of a translocation breakpoint associated with the development of a stem cell leukemia, encodes a protein that contains the highly conserved basic helix-loop-helix (bHLH) motif found in a large array of eukaryotic transcription factors. 1311214 1992
Entrez Id: 6886
Gene Symbol: TAL1
TAL1
0.080 GeneticVariation disease BEFREE We previously showed that mouse fetal liver (FL) hemato/vascular cells from day 12 of gestation (E12), expressing the Stem Cell Leukaemia (SCL) gene enhancer transgene (SCL-PLAP<sup>+</sup> cells), had robust endothelial engraftment potential when transferred to the blood stream of newborns or adult conditioned recipients, compared to the scarce vascular contribution of adult bone marrow cells. 27615355 2017
Entrez Id: 6886
Gene Symbol: TAL1
TAL1
0.080 GeneticVariation disease BEFREE We have identified the human gene, SCL.We discovered this gene because of its involvement in a chromosomal translocation associated with the occurrence of a stem cell leukemia manifesting myeloid and lymphoid differentiation capabilities. 2602361 1989
Entrez Id: 3855
Gene Symbol: KRT7
KRT7
0.070 GeneticVariation disease BEFREE The interstitial deletion at 1p32 involving SIL (SCL-interrupting locus)/SCL (stem cell leukemia) is a case involving two non-V(D)J sites that have been suggested to be V(D)J recombination mistakes. 11390401 2001
Entrez Id: 3855
Gene Symbol: KRT7
KRT7
0.070 GeneticVariation disease BEFREE The SCL gene, initially discovered at the site of a translocation breakpoint associated with the development of a stem cell leukemia, encodes a protein that contains the highly conserved basic helix-loop-helix (bHLH) motif found in a large array of eukaryotic transcription factors. 1311214 1992
Entrez Id: 51540
Gene Symbol: SCLY
SCLY
0.070 GeneticVariation disease BEFREE The SCL gene, initially discovered at the site of a translocation breakpoint associated with the development of a stem cell leukemia, encodes a protein that contains the highly conserved basic helix-loop-helix (bHLH) motif found in a large array of eukaryotic transcription factors. 1311214 1992
Entrez Id: 51540
Gene Symbol: SCLY
SCLY
0.070 GeneticVariation disease BEFREE We have identified the human gene, SCL.We discovered this gene because of its involvement in a chromosomal translocation associated with the occurrence of a stem cell leukemia manifesting myeloid and lymphoid differentiation capabilities. 2602361 1989
Entrez Id: 3855
Gene Symbol: KRT7
KRT7
0.070 GeneticVariation disease BEFREE We have identified the human gene, SCL.We discovered this gene because of its involvement in a chromosomal translocation associated with the occurrence of a stem cell leukemia manifesting myeloid and lymphoid differentiation capabilities. 2602361 1989
Entrez Id: 3855
Gene Symbol: KRT7
KRT7
0.070 GeneticVariation disease BEFREE We previously showed that mouse fetal liver (FL) hemato/vascular cells from day 12 of gestation (E12), expressing the Stem Cell Leukaemia (SCL) gene enhancer transgene (SCL-PLAP<sup>+</sup> cells), had robust endothelial engraftment potential when transferred to the blood stream of newborns or adult conditioned recipients, compared to the scarce vascular contribution of adult bone marrow cells. 27615355 2017
Entrez Id: 51540
Gene Symbol: SCLY
SCLY
0.070 GeneticVariation disease BEFREE The interstitial deletion at 1p32 involving SIL (SCL-interrupting locus)/SCL (stem cell leukemia) is a case involving two non-V(D)J sites that have been suggested to be V(D)J recombination mistakes. 11390401 2001
Entrez Id: 51540
Gene Symbol: SCLY
SCLY
0.070 GeneticVariation disease BEFREE We previously showed that mouse fetal liver (FL) hemato/vascular cells from day 12 of gestation (E12), expressing the Stem Cell Leukaemia (SCL) gene enhancer transgene (SCL-PLAP<sup>+</sup> cells), had robust endothelial engraftment potential when transferred to the blood stream of newborns or adult conditioned recipients, compared to the scarce vascular contribution of adult bone marrow cells. 27615355 2017
Entrez Id: 3205
Gene Symbol: HOXA9
HOXA9
0.030 GeneticVariation disease BEFREE Gene expression profiling of SYNCRIP-depleted cells demonstrated a loss of the MLL and HOXA9 leukemia stem cell program. 28436985 2017
Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
0.020 GeneticVariation disease BEFREE It is hoped that the same will happen in other MPN with specific genetic alterations: polycythemia vera (JAK2 V617F and other JAK2 mutations), essential thrombocythemia (JAK2V617F and MPL515 mutations), primary myelofibrosis (JAK2 V617F and MPL515 mutations), systemic mastocytosis (KITD816V and other KIT mutations) and stem cell leukaemia/lymphoma (ZNF198-FGFR1 and other FGFR1 fusion genes). 19175693 2009
Entrez Id: 2122
Gene Symbol: MECOM
MECOM
0.020 GeneticVariation disease BEFREE Establishment of an undifferentiated leukemia cell line (Kasumi-3) with t(3;7)(q27;q22) and activation of the EVI1 gene. 8613429 1996
Entrez Id: 1236
Gene Symbol: CCR7
CCR7
0.020 GeneticVariation disease BEFREE Establishment of an undifferentiated leukemia cell line (Kasumi-3) with t(3;7)(q27;q22) and activation of the EVI1 gene. 8613429 1996
Entrez Id: 10099
Gene Symbol: TSPAN3
TSPAN3
0.010 GeneticVariation disease BEFREE However, Tspan3 deletion impaired leukemia stem cell self-renewal and disease propagation and markedly improved survival in mouse models of AML. 26212080 2015
Entrez Id: 2908
Gene Symbol: NR3C1
NR3C1
0.010 GeneticVariation disease BEFREE Subsequently, more detailed analyses of the t(3;5)(q21;q31) revealed fusion of NR3C1 to a long noncoding RNA (lncRNA) gene (lincRNA-3q) that encodes a novel, nuclear, noncoding RNA involved in the regulation of leukemia stem cell programs and G1/S transition, via E2F. 27060168 2016
Entrez Id: 23158
Gene Symbol: TBC1D9
TBC1D9
0.010 GeneticVariation disease BEFREE The results in different types of leukaemia were (number of patients with detectable mdr1 RNA/total number of patients; median number of transcripts per cell in samples with detectable mdr1 RNA); de novo untreated acute myelocytic leukaemia (AML): 20/44; 0.7, secondary acute myelocytic leukaemia: 8/13; 1.1, acute lymphocytic (ALL) and undifferentiated leukaemia: 5/14; 0.6, relapsed leukaemia: 7/15; 0.7. 1380280 1992
Entrez Id: 6490
Gene Symbol: PMEL
PMEL
0.010 GeneticVariation disease BEFREE The interstitial deletion at 1p32 involving SIL (SCL-interrupting locus)/SCL (stem cell leukemia) is a case involving two non-V(D)J sites that have been suggested to be V(D)J recombination mistakes. 11390401 2001
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.010 GeneticVariation disease BEFREE It is hoped that the same will happen in other MPN with specific genetic alterations: polycythemia vera (JAK2 V617F and other JAK2 mutations), essential thrombocythemia (JAK2V617F and MPL515 mutations), primary myelofibrosis (JAK2 V617F and MPL515 mutations), systemic mastocytosis (KITD816V and other KIT mutations) and stem cell leukaemia/lymphoma (ZNF198-FGFR1 and other FGFR1 fusion genes). 19175693 2009
Entrez Id: 7750
Gene Symbol: ZMYM2
ZMYM2
0.010 GeneticVariation disease BEFREE It is hoped that the same will happen in other MPN with specific genetic alterations: polycythemia vera (JAK2 V617F and other JAK2 mutations), essential thrombocythemia (JAK2V617F and MPL515 mutations), primary myelofibrosis (JAK2 V617F and MPL515 mutations), systemic mastocytosis (KITD816V and other KIT mutations) and stem cell leukaemia/lymphoma (ZNF198-FGFR1 and other FGFR1 fusion genes). 19175693 2009
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.010 GeneticVariation disease BEFREE The results in different types of leukaemia were (number of patients with detectable mdr1 RNA/total number of patients; median number of transcripts per cell in samples with detectable mdr1 RNA); de novo untreated acute myelocytic leukaemia (AML): 20/44; 0.7, secondary acute myelocytic leukaemia: 8/13; 1.1, acute lymphocytic (ALL) and undifferentiated leukaemia: 5/14; 0.6, relapsed leukaemia: 7/15; 0.7. 1380280 1992
Entrez Id: 6491
Gene Symbol: STIL
STIL
0.010 GeneticVariation disease BEFREE The interstitial deletion at 1p32 involving SIL (SCL-interrupting locus)/SCL (stem cell leukemia) is a case involving two non-V(D)J sites that have been suggested to be V(D)J recombination mistakes. 11390401 2001