Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.010 GeneticVariation disease BEFREE The results in different types of leukaemia were (number of patients with detectable mdr1 RNA/total number of patients; median number of transcripts per cell in samples with detectable mdr1 RNA); de novo untreated acute myelocytic leukaemia (AML): 20/44; 0.7, secondary acute myelocytic leukaemia: 8/13; 1.1, acute lymphocytic (ALL) and undifferentiated leukaemia: 5/14; 0.6, relapsed leukaemia: 7/15; 0.7. 1380280 1992
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.020 Biomarker disease BEFREE Here, we provide an update on what is currently known on the mechanisms underlying progression and present the latest acquisitions on BCR-ABL1-independent resistance and leukemia stem cell persistence. 31817512 2019
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.020 Biomarker disease BEFREE These cases involve JT of 1q in a case of acute myeloblastic leukemia (AML)-M1, a case of Burkitt lymphoma, and a case of BCR/ABL-positive acute lymphoblastic leukemia, as well as a JT of 13q in a case of AML-M5, and a JT of 11q segment in a case of undifferentiated leukemia. 19027489 2008
Entrez Id: 100
Gene Symbol: ADA
ADA
0.010 Biomarker disease BEFREE Conversion of a stem cell leukemia from a T-lymphoid to a myeloid phenotype induced by the adenosine deaminase inhibitor 2'-deoxycoformycin. 6607471 1984
Entrez Id: 30817
Gene Symbol: ADGRE2
ADGRE2
0.020 AlteredExpression disease BEFREE Importantly, we identified pathways involved in the leukemia stem cell interaction with the bone marrow niche, such as integrin, CXCR4, and interleukin-8, among the most upregulated signaling pathways in patients with high CD97 expression. 31260716 2019
Entrez Id: 30817
Gene Symbol: ADGRE2
ADGRE2
0.020 Biomarker disease BEFREE CD97 is a critical regulator of acute myeloid leukemia stem cell function. 31371381 2019
Entrez Id: 976
Gene Symbol: ADGRE5
ADGRE5
0.020 Biomarker disease BEFREE CD97 is a critical regulator of acute myeloid leukemia stem cell function. 31371381 2019
Entrez Id: 976
Gene Symbol: ADGRE5
ADGRE5
0.020 AlteredExpression disease BEFREE Importantly, we identified pathways involved in the leukemia stem cell interaction with the bone marrow niche, such as integrin, CXCR4, and interleukin-8, among the most upregulated signaling pathways in patients with high CD97 expression. 31260716 2019
Entrez Id: 196
Gene Symbol: AHR
AHR
0.010 Biomarker disease BEFREE Diminished AHR Signaling Drives Human Acute Myeloid Leukemia Stem Cell Maintenance. 31519687 2019
Entrez Id: 207
Gene Symbol: AKT1
AKT1
0.010 AlteredExpression disease BEFREE TRIM62 loss was associated with altered expression of proteins involved in leukemia stem cell homeostasis (β-catenin and Notch), cell motility, and adhesion (integrin-β3, ras-related C3 botulinum toxin substrate [RAC], and fibronectin), hypoxia (Hypoxia-inducible factor 1-alpha [HIF1α], egl-9 family hypoxia-inducible factor 1 [Egln1], and glucose-regulated protein, 78 kDa [GRP78]), and apoptosis (B-cell lymphoma-extra large (BclXL) and caspase 9). 25248926 2015
Entrez Id: 246
Gene Symbol: ALOX15
ALOX15
0.010 Biomarker disease BEFREE Arachidonate 15-lipoxygenase is required for chronic myeloid leukemia stem cell survival. 25105362 2014
Entrez Id: 586
Gene Symbol: BCAT1
BCAT1
0.010 Biomarker disease BEFREE Our results suggest the BCAA-BCAT1-αKG pathway as a therapeutic target to compromise leukaemia stem-cell function in patients with IDH<sup>WT</sup>TET2<sup>WT</sup> AML. 29144447 2017
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.010 AlteredExpression disease BEFREE B-cell lymphoma 2 (BCL-2) is an antiapoptotic protein involved in the survival and maintenance of AML, and it is overexpressed in the leukemia stem cell population. 31628431 2019
Entrez Id: 604
Gene Symbol: BCL6
BCL6
0.010 Biomarker disease BEFREE BCL6-mediated repression of p53 is critical for leukemia stem cell survival in chronic myeloid leukemia. 21911423 2011
Entrez Id: 613
Gene Symbol: BCR
BCR
0.030 Biomarker disease BEFREE SIGNIFICANCE: RHOA activation is a critical event in the progression of BCR-FGFR1-driven leukemogenesis in stem cell leukemia and lymphoma syndrome and is regulated by the BCR GEF domain. 30413411 2019
Entrez Id: 613
Gene Symbol: BCR
BCR
0.030 Biomarker disease BEFREE Here, we provide an update on what is currently known on the mechanisms underlying progression and present the latest acquisitions on BCR-ABL1-independent resistance and leukemia stem cell persistence. 31817512 2019
Entrez Id: 613
Gene Symbol: BCR
BCR
0.030 AlteredExpression disease BEFREE None of the patients with ALL or CML-lymphoid-BC expressed SCL. 7579412 1995
Entrez Id: 648
Gene Symbol: BMI1
BMI1
0.010 AlteredExpression disease BEFREE Bmi-1 was expressed at its highest levels in undifferentiated leukemia cells. 17395774 2007
Entrez Id: 842
Gene Symbol: CASP9
CASP9
0.010 AlteredExpression disease BEFREE TRIM62 loss was associated with altered expression of proteins involved in leukemia stem cell homeostasis (β-catenin and Notch), cell motility, and adhesion (integrin-β3, ras-related C3 botulinum toxin substrate [RAC], and fibronectin), hypoxia (Hypoxia-inducible factor 1-alpha [HIF1α], egl-9 family hypoxia-inducible factor 1 [Egln1], and glucose-regulated protein, 78 kDa [GRP78]), and apoptosis (B-cell lymphoma-extra large (BclXL) and caspase 9). 25248926 2015
Entrez Id: 863
Gene Symbol: CBFA2T3
CBFA2T3
0.010 AlteredExpression disease BEFREE Gene set enrichment analysis showed that CBFA2T3 expression marks LSC signatures in primary AML samples. 31040112 2019
Entrez Id: 6348
Gene Symbol: CCL3
CCL3
0.010 Biomarker disease BEFREE In murine models of chronic myelogenous leukemia (CML), CCL3 is critical for the maintenance of a leukemia stem cell population, and leukemia progression. 30279500 2018
Entrez Id: 1236
Gene Symbol: CCR7
CCR7
0.020 AlteredExpression disease BEFREE Therefore, the enhanced EVI1 expression may contribute to the development of a subset of undifferentiated leukemia. 10482986 1999
Entrez Id: 1236
Gene Symbol: CCR7
CCR7
0.020 GeneticVariation disease BEFREE Establishment of an undifferentiated leukemia cell line (Kasumi-3) with t(3;7)(q27;q22) and activation of the EVI1 gene. 8613429 1996
Entrez Id: 947
Gene Symbol: CD34
CD34
0.070 Biomarker disease BEFREE In addition, the leukemic cells occurring during blast crisis of one of our patients displayed the typical features of a stem cell leukemia (CD34+, CD19-, CD2-, myeloperoxidase-). 7795240 1995
Entrez Id: 947
Gene Symbol: CD34
CD34
0.070 AlteredExpression disease BEFREE Indeed, LSCs are highly enriched in CD34+CD38- leukemic cells that exhibit positive aldehyde dehydrogenase activity (ALDH+) on flow cytometry, these LSCs are resistant to currently existing treatments in AML such as cytarabine and anthracycline that, at the cost of great toxicity on normal cells, are highly active against the leukemic bulk, but spare the LSCs responsible for relapse. 27611922 2016