Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5727
Gene Symbol: PTCH1
PTCH1
0.190 GeneticVariation disease BEFREE In addition, a total of 204 PTCH1 mutations (187 mutations from 210 cases with NBCCS-associated and 17 mutations from 57 cases with sporadic KCOTs) were compiled from 78 published papers. 24204797 2013
Entrez Id: 5727
Gene Symbol: PTCH1
PTCH1
0.190 GeneticVariation disease BEFREE While various genetic alterations, such as PTCH1 mutation and loss of heterozygosity in tumor suppressor genes, have been reported, the molecular background of OKC is not well-understood. 29103753 2017
Entrez Id: 5727
Gene Symbol: PTCH1
PTCH1
0.190 GeneticVariation disease BEFREE We describe a Gorlin syndrome (GS) case with two different second hit mutations of PTCH1, one in a keratocystic odontogenic tumor (KCOT) and the other in an ovarian leiomyoma. 26782978 2016
Entrez Id: 5727
Gene Symbol: PTCH1
PTCH1
0.190 GeneticVariation disease BEFREE Considering that alterations in this pathway have been described in sporadic and nevoid basal cell syndrome-associated KOT, we tested the hypothesis that OOC is also associated with loss of heterozygosity (LOH) of the PTCH gene. 21138481 2011
Entrez Id: 5727
Gene Symbol: PTCH1
PTCH1
0.190 GeneticVariation disease BEFREE It is known that some sporadic OKCs harbor PTCH1 mutations, and via the dissection of cyst epithelium, these mutations were demonstrated to occur much more frequently than previously thought. 28489259 2017
Entrez Id: 5727
Gene Symbol: PTCH1
PTCH1
0.190 GeneticVariation disease BEFREE Mutations in the patched 1 (PTCH1) gene are the main genetic alteration reported in sporadic and nevoid basal cell carcinoma-associated odontogenic keratocyst (OKC). 29272070 2018
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.070 GeneticVariation disease BEFREE The C/C genotype of P53 gene codon 72 increases the risk of developing sporadic KCOT and may be a useful tool for screening and diagnostic purposes. 25773801 2015
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.070 GeneticVariation disease BEFREE Mutation of p53 gene at codon 237 was observed in only two specimens (one KOT and one DC). 18221322 2008
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.020 GeneticVariation disease BEFREE We found frequent BRAF V600E mutation in OKC (24 of 38 samples, 63.2%). 29103753 2017
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.020 GeneticVariation disease BEFREE Initially, 10 sporadic and eight OKC samples from four NBCCS patients (a pair of lesions from each syndromic patient) were submitted to targeted next-generation sequencing (NGS) of 2800 different mutations in 50 oncogenes and tumor suppressor genes, including BRAF. 29272070 2018
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.010 GeneticVariation disease BEFREE Therefore, it seems that the gene polymorphism of the cytokines of the IL-1 family is influential in the pathogenesis of KCOT and the patients' susceptibility to disease. 22582837 2012
Entrez Id: 3552
Gene Symbol: IL1A
IL1A
0.010 GeneticVariation disease BEFREE Therefore, it seems that the gene polymorphism of the cytokines of the IL-1 family is influential in the pathogenesis of KCOT and the patients' susceptibility to disease. 22582837 2012
Entrez Id: 2272
Gene Symbol: FHIT
FHIT
0.010 GeneticVariation disease BEFREE Of the six frozen specimens, three exhibited FHIT gene LOH (two RC and one KOT). 18221322 2008
Entrez Id: 5727
Gene Symbol: PTCH1
PTCH1
0.190 Biomarker disease BEFREE Gene mutations and loss of heterozygosity (LOH) of the hedgehog receptor PTCH1 plays an essential role in the pathogenesis of KCOT. 23951062 2013
Entrez Id: 5727
Gene Symbol: PTCH1
PTCH1
0.190 Biomarker disease BEFREE The aim of the present study was to investigate the expression of PTCH1 first exons in OKC tumors to shed light on scenery whereby PTCH1 coordinates OKC tumorigenesis. 18674957 2009
Entrez Id: 5727
Gene Symbol: PTCH1
PTCH1
0.190 Biomarker disease HPO
Entrez Id: 51684
Gene Symbol: SUFU
SUFU
0.110 Biomarker disease HPO
Entrez Id: 51684
Gene Symbol: SUFU
SUFU
0.110 Biomarker disease BEFREE Our data indicates a significant role of PTCH1 and SUFU in the pathogenesis of KCOT, and the genotype-oriented subgroups constitute entities with different potential aggressiveness. 23951062 2013
Entrez Id: 8643
Gene Symbol: PTCH2
PTCH2
0.100 Biomarker disease HPO
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.070 Biomarker disease BEFREE This retrospective study aims to investigate the prognostic relevance of various clinicopathological features as well as immunoexpression of COX-2, bcl-2, PCNA, and p53 in sporadic OKC. 29508125 2018
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.070 Biomarker disease BEFREE The aim of this study was to investigate the presence of methylation in P16, P21, P27, P53 and RB1 genes in OKC tumors. 19192054 2009
Entrez Id: 5925
Gene Symbol: RB1
RB1
0.010 Biomarker disease BEFREE The aim of this study was to investigate the presence of methylation in P16, P21, P27, P53 and RB1 genes in OKC tumors. 19192054 2009
Entrez Id: 3339
Gene Symbol: HSPG2
HSPG2
0.010 Biomarker disease BEFREE The result suggests that the characteristic intra-lining-epithelial deposit of perlecan in KCOT, which has never been seen in other cystic jaw lesions, is a new evidence supporting the neoplastic nature of KCOT. 18205742 2008
Entrez Id: 92140
Gene Symbol: MTDH
MTDH
0.010 Biomarker disease BEFREE AEG-1-positive staining was found in 37 (88%) of 42 ameloblastomas and in 24 (83%) of 29 KCOTs. 27381451 2017
Entrez Id: 4312
Gene Symbol: MMP1
MMP1
0.010 Biomarker disease BEFREE Positive pressure enhanced the expression of IL-1alpha mRNA and protein in odontogenic keratocyst epithelial cells, and increased the secretion of MMP-1, MMP-2, MMP-3, and PGE2 in a co-culture of odontogenic keratocyst fibroblasts and the epithelial cells. 16183790 2005