Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 51317
Gene Symbol: PHF21A
PHF21A
0.550 Biomarker disease GENOMICS_ENGLAND This study shows that PHF21A haploinsufficiency results in intellectual disability and craniofacial anomalies and possibly contributes to susceptibility to autism spectrum disorder, epilepsy, and overgrowth, all of which are PSS features. 30487643 2019
Entrez Id: 51317
Gene Symbol: PHF21A
PHF21A
0.550 Biomarker disease BEFREE This study shows that PHF21A haploinsufficiency results in intellectual disability and craniofacial anomalies and possibly contributes to susceptibility to autism spectrum disorder, epilepsy, and overgrowth, all of which are PSS features. 30487643 2019
Entrez Id: 51317
Gene Symbol: PHF21A
PHF21A
0.550 Biomarker disease BEFREE Genetic evidence has implicated haploinsufficiency of PHF21A, a gene that encodes a histone-binding protein, as the likely cause of intellectual disability and craniofacial abnormalities in Potocki-Shaffer Syndrome. 28571721 2018
Entrez Id: 51317
Gene Symbol: PHF21A
PHF21A
0.550 Biomarker disease BEFREE Potocki-Shaffer syndrome in a child without intellectual disability-The role of PHF21A in cognitive function. 28127865 2017
Entrez Id: 51317
Gene Symbol: PHF21A
PHF21A
0.550 Biomarker disease BEFREE Recently, translocations interrupting PHF21A have been associated with intellectual disability and craniofacial anomalies similar to those seen in PSS. 23239541 2013
Entrez Id: 51317
Gene Symbol: PHF21A
PHF21A
0.550 Biomarker disease BEFREE Our finding that disruption of PHF21A by translocations in the PSS region is associated with ID adds to the growing list of ID-associated genes that emphasize the critical role of transcriptional regulation and chromatin remodeling in normal brain development and cognitive function. 22770980 2012
Entrez Id: 51317
Gene Symbol: PHF21A
PHF21A
0.550 ChromosomalRearrangement disease ORPHANET Our finding that disruption of PHF21A by translocations in the PSS region is associated with ID adds to the growing list of ID-associated genes that emphasize the critical role of transcriptional regulation and chromatin remodeling in normal brain development and cognitive function. 22770980 2012
Entrez Id: 51317
Gene Symbol: PHF21A
PHF21A
0.550 Biomarker disease GENOMICS_ENGLAND
Entrez Id: 2132
Gene Symbol: EXT2
EXT2
0.340 GeneticVariation disease BEFREE The PSS-associated genes EXT2 and ALX4, together with PHF21A, all map to this region flanked by markers D11S1393 and D11S1319. 26333423 2015
Entrez Id: 60529
Gene Symbol: ALX4
ALX4
0.340 GeneticVariation disease BEFREE Being proximal to EXT2 and ALX4, a 1.1 Mb region containing 12 annotated genes had been identified by deletion mapping to explain PSS phenotypes except multiple exostoses and parietal foramina. 26333423 2015
Entrez Id: 60529
Gene Symbol: ALX4
ALX4
0.340 GeneticVariation disease BEFREE The proximal short arm of chromosome 11 harbors several candidate genes that could explain the patient's signs and symptoms including ALX4 and EXT2, which are always present in the interstitial deletion of the short arm of chromosome 11 in PSS. 17290930 2007
Entrez Id: 2132
Gene Symbol: EXT2
EXT2
0.340 GeneticVariation disease BEFREE The proximal short arm of chromosome 11 harbors several candidate genes that could explain the patient's signs and symptoms including ALX4 and EXT2, which are always present in the interstitial deletion of the short arm of chromosome 11 in PSS. 17290930 2007
Entrez Id: 2132
Gene Symbol: EXT2
EXT2
0.340 Biomarker disease BEFREE The full spectrum of PSS manifests when deletions are at least 2.1 Mb in size, spanning from D11S1393 to D11S1385/D11S1319 (44.6-46.7 Mb from the 11p terminus) and encompassing EXT2, responsible for multiple exostoses, and ALX4, causing parietal foramina. 15852040 2005
Entrez Id: 60529
Gene Symbol: ALX4
ALX4
0.340 Biomarker disease BEFREE The full spectrum of PSS manifests when deletions are at least 2.1 Mb in size, spanning from D11S1393 to D11S1385/D11S1319 (44.6-46.7 Mb from the 11p terminus) and encompassing EXT2, responsible for multiple exostoses, and ALX4, causing parietal foramina. 15852040 2005
Entrez Id: 2132
Gene Symbol: EXT2
EXT2
0.340 ChromosomalRearrangement disease ORPHANET Construction of a natural panel of 11p11.2 deletions and further delineation of the critical region involved in Potocki-Shaffer syndrome. 15852040 2005
Entrez Id: 60529
Gene Symbol: ALX4
ALX4
0.340 ChromosomalRearrangement disease ORPHANET Construction of a natural panel of 11p11.2 deletions and further delineation of the critical region involved in Potocki-Shaffer syndrome. 15852040 2005
Entrez Id: 2132
Gene Symbol: EXT2
EXT2
0.340 Biomarker disease BEFREE Familial case of Potocki-Shaffer syndrome associated with microdeletion of EXT2 and ALX4. 11903336 2001
Entrez Id: 60529
Gene Symbol: ALX4
ALX4
0.340 Biomarker disease BEFREE Familial case of Potocki-Shaffer syndrome associated with microdeletion of EXT2 and ALX4. 11903336 2001
Entrez Id: 780904
Gene Symbol: PSS
PSS
0.030 Biomarker disease BEFREE A fiber-based optrode modified with a double-layer platinum black-poly (3,4ethylenedioxythiophene) PEDOT/poly (4-styrenesulfonate) PSS (Pt-PP) coating has been developed for improvement of neural recording quality and mitigation of photoelectric artifact simultaneously. 31539650 2019
Entrez Id: 780904
Gene Symbol: PSS
PSS
0.030 Biomarker disease BEFREE A poly(3,4-ethylenedioxythiophene):poly(4-styrenesulfonate) (PEDOT:PSS) hydrogel is prepared by thermal treatment of a commercial PEDOT:PSS (PH1000) suspension in 0.1 mol L<sup>-1</sup> sulfuric acid followed by partially removing its PSS component with concentrated sulfuric acid. 28513994 2017
Entrez Id: 780904
Gene Symbol: PSS
PSS
0.030 GeneticVariation disease BEFREE Potocki-Shaffer syndrome (PSS, OMIM #601224) is a rare contiguous gene deletion syndrome caused by haploinsufficiency of genes located on the 11p11.2p12. 25653495 2015
Entrez Id: 3627
Gene Symbol: CXCL10
CXCL10
0.020 AlteredExpression disease BEFREE Gene expression profiling of lip salivary gland (LSG) has shown that C-X-C motif chemokine 10 (CXCL10) and matrix metalloproteinase 9 (MMP9) expression is upregulated in primary Sjögren's syndrome (pSS) patients. 31440939 2019
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.020 Biomarker disease BEFREE We observed in both PSS (IFN-γ: 174.9 pg/mL; TNF-α: 25.1 pg/mL) and FU (IFN-γ: 25.4 pg/mL; TNF-α: 27.2 pg/mL) groups a significantly increased level of T-helper 1 immune mediators compared to controls (IFN-γ, TNF-α: 0 pg/mL) [median]. 29944680 2018
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.020 Biomarker disease BEFREE We observed in both PSS (IFN-γ: 174.9 pg/mL; TNF-α: 25.1 pg/mL) and FU (IFN-γ: 25.4 pg/mL; TNF-α: 27.2 pg/mL) groups a significantly increased level of T-helper 1 immune mediators compared to controls (IFN-γ, TNF-α: 0 pg/mL) [median]. 29944680 2018
Entrez Id: 3627
Gene Symbol: CXCL10
CXCL10
0.020 AlteredExpression disease BEFREE High concentrations of IL-1RA, IL-8, IL-10, and IP-10 correlate with active inflammation in PSS, while FU may trigger chronic inflammation. 29944680 2018