Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23314
Gene Symbol: SATB2
SATB2
0.900 Biomarker disease GENOMICS_ENGLAND Clinical and molecular consequences of disease-associated de novo mutations in SATB2. 28151491 2017
Entrez Id: 23314
Gene Symbol: SATB2
SATB2
0.900 Biomarker disease CTD_human Toriello-Carey syndrome in a patient with a de novo balanced translocation [46,XY,t(2;14)(q33;q22)] interrupting SATB2. 19170718 2009
Entrez Id: 23314
Gene Symbol: SATB2
SATB2
0.900 Biomarker disease CTD_human We find that, similar to the way in which SATB2 is perceived to act in humans, craniofacial defects due to haploinsufficiency of Satb2, including cleft palate (in approximately 25% of cases), phenocopy those seen with 2q32-q33 deletions and translocations in humans. 16960803 2006
Entrez Id: 8626
Gene Symbol: TP63
TP63
0.450 Biomarker disease CTD_human We performed p63 mutation analysis in a sample of 43 individuals and families affected with EEC syndrome, in 35 individuals affected with SHFM, and in three families with the EEC-like condition limb-mammary syndrome (LMS), which is characterized by ectrodactyly, cleft palate, and mammary-gland abnormalities. 11462173 2001
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
0.440 Biomarker disease CTD_human Abnormal craniofacial development and expression patterns of extracellular matrix components in transgenic Del1 mice harboring a deletion mutation in the type II collagen gene. 15562585 2004
Entrez Id: 3664
Gene Symbol: IRF6
IRF6
0.400 Biomarker disease CTD_human Abnormal skin, limb and craniofacial morphogenesis in mice deficient for interferon regulatory factor 6 (Irf6). 17041601 2006
Entrez Id: 4487
Gene Symbol: MSX1
MSX1
0.400 Biomarker disease CTD_human [Genetic and experimental approach to bony craniofacial growth: the role of the divergent homeobox gene Msx1]. 15301380 2003
Entrez Id: 4487
Gene Symbol: MSX1
MSX1
0.400 Biomarker disease CTD_human Transgenic rescue of the cleft palate of Msx1(-/-) mice overcame the neonatal lethality and allowed Msx1(-/-) mice to grow into adulthood but retain the phenotype of the absence of the malleal processus brevis. 12701100 2003
Entrez Id: 4487
Gene Symbol: MSX1
MSX1
0.400 Biomarker disease CTD_human Transgenic expression of human Bmp4 driven by the mouse Msx1 promoter in the Msx1(-/-) palatal mesenchyme rescued the cleft palate phenotype and neonatal lethality. 12163415 2002
Entrez Id: 7043
Gene Symbol: TGFB3
TGFB3
0.390 Biomarker disease CTD_human TCDD promoted EMT of hFPECs via AhR, which involved the activation of EGFR/ERK signaling. 26971374 2016
Entrez Id: 7043
Gene Symbol: TGFB3
TGFB3
0.390 Biomarker disease CTD_human Unlike other null mutants with cleft palate, TGF-beta 3-/- mice lack other concomitant craniofacial abnormalities. 7493022 1995
Entrez Id: 2260
Gene Symbol: FGFR1
FGFR1
0.340 Biomarker disease CTD_human Sequence evaluation of FGF and FGFR gene conserved non-coding elements in non-syndromic cleft lip and palate cases. 17963255 2007
Entrez Id: 2263
Gene Symbol: FGFR2
FGFR2
0.330 Biomarker disease CTD_human Fgfr2 continues to express in palate on E12.5 and E13.5 in both epithelial and mesenchymal cells, and inactivation of Fgfr2 expression in mesenchymal cells using floxed Fgfr2 allele and Osr2-Cre leads to cleft palate at various stages including reorientation, horizontal growth and fusion. 29526646 2018
Entrez Id: 2263
Gene Symbol: FGFR2
FGFR2
0.330 Biomarker disease CTD_human Sequence evaluation of FGF and FGFR gene conserved non-coding elements in non-syndromic cleft lip and palate cases. 17963255 2007
Entrez Id: 23327
Gene Symbol: NEDD4L
NEDD4L
0.320 Biomarker disease CTD_human Here we show that missense mutations in NEDD4L mapping to the HECT domain of the encoded E3 ubiquitin ligase lead to PNH associated with toe syndactyly, cleft palate and neurodevelopmental delay. 27694961 2016
Entrez Id: 2255
Gene Symbol: FGF10
FGF10
0.320 Biomarker disease CTD_human Sequence evaluation of FGF and FGFR gene conserved non-coding elements in non-syndromic cleft lip and palate cases. 17963255 2007
Entrez Id: 7042
Gene Symbol: TGFB2
TGFB2
0.310 Biomarker disease CTD_human Strain-dependent effects of transforming growth factor-β1 and 2 during mouse secondary palate development. 25450421 2014
Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
0.310 Biomarker disease CTD_human Strain-dependent effects of transforming growth factor-β1 and 2 during mouse secondary palate development. 25450421 2014
Entrez Id: 7298
Gene Symbol: TYMS
TYMS
0.310 Biomarker disease CTD_human Folate pathway and nonsyndromic cleft lip and palate. 21254359 2011
Entrez Id: 374654
Gene Symbol: KIF7
KIF7
0.310 Biomarker disease CTD_human Here we report mutations in KIF7 in individuals with hydrolethalus and acrocallosal syndromes, two multiple malformation disorders with overlapping features that include polydactyly, brain abnormalities and cleft palate. 21552264 2011
Entrez Id: 5156
Gene Symbol: PDGFRA
PDGFRA
0.310 Biomarker disease CTD_human MicroRNA Mirn140 modulates Pdgf signaling during palatogenesis. 18264099 2008
Entrez Id: 6259
Gene Symbol: RYK
RYK
0.310 Biomarker disease CTD_human Ryk-deficient mice exhibit craniofacial defects associated with perturbed Eph receptor crosstalk. 10932185 2000
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.300 Biomarker disease CTD_human Long-range enhancers regulating Myc expression are required for normal facial morphogenesis. 24859337 2014
Entrez Id: 4846
Gene Symbol: NOS3
NOS3
0.300 Biomarker disease CTD_human Folate pathway and nonsyndromic cleft lip and palate. 21254359 2011
Entrez Id: 23743
Gene Symbol: BHMT2
BHMT2
0.300 Biomarker disease CTD_human Folate pathway and nonsyndromic cleft lip and palate. 21254359 2011