Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2099
Gene Symbol: ESR1
ESR1
0.040 Biomarker disease BEFREE We selected 17 biomarkers highly relevant to LMS in 4 tumorigenic pathways including steroid hormone receptors (estrogen receptor [ER] and progesterone receptor [PR]), cell cycle/tumor suppressor genes, AKT pathway markers, and associated oncogenes. 29258902 2018
Entrez Id: 800
Gene Symbol: CALD1
CALD1
0.030 Biomarker disease BEFREE This study explores the differential expression of these markers, as well as caldesmon, in LMS cases to assess diagnostic utility. 29189258 2017
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.030 Biomarker disease BEFREE The primary tumor was clearly positive for á-smooth muscle type actin and desmin in moderately differentiated areas and indicated a loss of myogenic differentiation in other regions and therefore was classified as a poorly differentiated LMS. 9664117 1998
Entrez Id: 6121
Gene Symbol: RPE65
RPE65
0.030 GeneticVariation disease BEFREE Moreover, we show that transcription of Dlx3 is abrogated by mutations in the sterile alpha-motif (SAM) domain of p63 that are associated with ankyloblepharon-ectodermal dysplasia-clefting (AEC) dysplasias, but not by mutations found in ectrodactylyectodermal dysplasia-cleft lip/palate (EEC), Limb-mammary syndrome (LMS) and split hand-foot malformation (SHFM) dysplasias. 17164413 2007
Entrez Id: 207
Gene Symbol: AKT1
AKT1
0.030 Biomarker disease BEFREE The PI3K/AKT/mTOR pathway plays a crucial role in the development of leiomyosarcomas (LMSs). 28002802 2017
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.030 Biomarker disease BEFREE Leiomyosarcomas (LMSs) constitute approximately one quarter of all sarcomas and are usually defined by morphologic criteria and/or immunoreactivity for actin or desmin. 21412072 2011
Entrez Id: 7405
Gene Symbol: UVRAG
UVRAG
0.030 GeneticVariation disease BEFREE The third hallmark of the EEC syndrome is orofacial clefting, in particular lip and palate. p63 mutations also cause the other five inherited syndromes: symptoms are overlapping, but each of these diseases has its own characteristic phenotypic features: for instance AEC syndrome (ankyloblepharon-ectodermal defects-cleft lip/palate) has as distinctive feature ankyloblepharon, while mammary glands and nipples hypoplasia are frequent findings in LMS syndrome and in ADULT syndrome (acro-dermato-ungual-lacrimal-tooth syndrome). 23407076 2013
Entrez Id: 93649
Gene Symbol: MYOCD
MYOCD
0.030 AlteredExpression disease BEFREE Significantly higher levels of expression for BAD, SRC, SRF, and MYOCD were confirmed in LMS when compared with UPS. 25028927 2014
Entrez Id: 10970
Gene Symbol: CKAP4
CKAP4
0.030 GeneticVariation disease BEFREE Moreover, we show that transcription of Dlx3 is abrogated by mutations in the sterile alpha-motif (SAM) domain of p63 that are associated with ankyloblepharon-ectodermal dysplasia-clefting (AEC) dysplasias, but not by mutations found in ectrodactylyectodermal dysplasia-cleft lip/palate (EEC), Limb-mammary syndrome (LMS) and split hand-foot malformation (SHFM) dysplasias. 17164413 2007
Entrez Id: 800
Gene Symbol: CALD1
CALD1
0.030 Biomarker disease BEFREE Expression of desmin and/or H-caldesmon was detected in 8/10 LMS PDX models. 28625393 2017
Entrez Id: 207
Gene Symbol: AKT1
AKT1
0.030 Biomarker disease BEFREE We selected 17 biomarkers highly relevant to LMS in 4 tumorigenic pathways including steroid hormone receptors (estrogen receptor [ER] and progesterone receptor [PR]), cell cycle/tumor suppressor genes, AKT pathway markers, and associated oncogenes. 29258902 2018
Entrez Id: 10970
Gene Symbol: CKAP4
CKAP4
0.030 GeneticVariation disease BEFREE The third hallmark of the EEC syndrome is orofacial clefting, in particular lip and palate. p63 mutations also cause the other five inherited syndromes: symptoms are overlapping, but each of these diseases has its own characteristic phenotypic features: for instance AEC syndrome (ankyloblepharon-ectodermal defects-cleft lip/palate) has as distinctive feature ankyloblepharon, while mammary glands and nipples hypoplasia are frequent findings in LMS syndrome and in ADULT syndrome (acro-dermato-ungual-lacrimal-tooth syndrome). 23407076 2013
Entrez Id: 93649
Gene Symbol: MYOCD
MYOCD
0.030 Biomarker disease BEFREE Collectively, these results show that human retroperitoneal LMS differentiation is dependent on MYOCD amplification/overexpression, suggesting that in these well-differentiated LMS, differentiation could be a consequence of an acquired genomic alteration. 19276386 2009
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.030 Biomarker disease BEFREE The cells exhibited a spindle shape and aggressive growth; they also expressed smooth muscle actin, reflecting the original LMS tissue (i.e. smooth muscle cells). 28981730 2017
Entrez Id: 207
Gene Symbol: AKT1
AKT1
0.030 Biomarker disease BEFREE We previously reported that curcumin reduced uterine LMS cell proliferation by targeting the AKT-mTOR pathway. 22350026 2013
Entrez Id: 6121
Gene Symbol: RPE65
RPE65
0.030 GeneticVariation disease BEFREE The third hallmark of the EEC syndrome is orofacial clefting, in particular lip and palate. p63 mutations also cause the other five inherited syndromes: symptoms are overlapping, but each of these diseases has its own characteristic phenotypic features: for instance AEC syndrome (ankyloblepharon-ectodermal defects-cleft lip/palate) has as distinctive feature ankyloblepharon, while mammary glands and nipples hypoplasia are frequent findings in LMS syndrome and in ADULT syndrome (acro-dermato-ungual-lacrimal-tooth syndrome). 23407076 2013
Entrez Id: 7405
Gene Symbol: UVRAG
UVRAG
0.030 GeneticVariation disease BEFREE Moreover, we show that transcription of Dlx3 is abrogated by mutations in the sterile alpha-motif (SAM) domain of p63 that are associated with ankyloblepharon-ectodermal dysplasia-clefting (AEC) dysplasias, but not by mutations found in ectrodactylyectodermal dysplasia-cleft lip/palate (EEC), Limb-mammary syndrome (LMS) and split hand-foot malformation (SHFM) dysplasias. 17164413 2007
Entrez Id: 93649
Gene Symbol: MYOCD
MYOCD
0.030 Biomarker disease BEFREE MYOCD, a key gene associated with smooth muscle differentiation, is amplified in a subset of both retroperitoneal and extremity LMS. 26541895 2016
Entrez Id: 10970
Gene Symbol: CKAP4
CKAP4
0.030 GeneticVariation disease BEFREE We performed p63 mutation analysis in a sample of 43 individuals and families affected with EEC syndrome, in 35 individuals affected with SHFM, and in three families with the EEC-like condition limb-mammary syndrome (LMS), which is characterized by ectrodactyly, cleft palate, and mammary-gland abnormalities. 11462173 2001
Entrez Id: 9791
Gene Symbol: PTDSS1
PTDSS1
0.030 Biomarker disease BEFREE Mutations in thePTDSS1gene coding one of the phosphatidylserine (PS) synthase enzymes, PSS1, were described as causative in LMS patients. 27044099 2016
Entrez Id: 6121
Gene Symbol: RPE65
RPE65
0.030 GeneticVariation disease BEFREE We performed p63 mutation analysis in a sample of 43 individuals and families affected with EEC syndrome, in 35 individuals affected with SHFM, and in three families with the EEC-like condition limb-mammary syndrome (LMS), which is characterized by ectrodactyly, cleft palate, and mammary-gland abnormalities. 11462173 2001
Entrez Id: 7405
Gene Symbol: UVRAG
UVRAG
0.030 GeneticVariation disease BEFREE We performed p63 mutation analysis in a sample of 43 individuals and families affected with EEC syndrome, in 35 individuals affected with SHFM, and in three families with the EEC-like condition limb-mammary syndrome (LMS), which is characterized by ectrodactyly, cleft palate, and mammary-gland abnormalities. 11462173 2001
Entrez Id: 800
Gene Symbol: CALD1
CALD1
0.030 AlteredExpression disease BEFREE The top 100 genes overexpressed in LMS included those coding for myosin light chain and caldesmon, but not the genes coding for desmin or actin.CD10 was not overexpressed in ESS. 23178314 2013
Entrez Id: 9791
Gene Symbol: PTDSS1
PTDSS1
0.030 GeneticVariation disease BEFREE LMS syndrome was suspected and a previously reported de novo heterozygous missense mutation (c.284G > T, p.R95L) in PTDSS1 was identified. 31403251 2019
Entrez Id: 9791
Gene Symbol: PTDSS1
PTDSS1
0.030 GeneticVariation disease BEFREE This disorder called Lenz-Majewski syndrome (LMS) is associated with gain of function mutations in PTDSS1, encoding an enzyme involved in phospholipid biosynthesis. 29341480 2018