Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 176
Gene Symbol: ACAN
ACAN
0.020 GeneticVariation disease BEFREE A mutation in the variable repeat region of the aggrecan gene (AGC1) causes a form of spondyloepiphyseal dysplasia associated with severe, premature osteoarthritis. 16080123 2005
Entrez Id: 176
Gene Symbol: ACAN
ACAN
0.020 Biomarker disease BEFREE This proximal location for AGC1 is further supported by linkage data from a second family with an autosomal recessive form of multiple epiphyseal dysplasia that also maps to the SED locus. 12205105 2002
Entrez Id: 124583
Gene Symbol: CANT1
CANT1
0.010 GeneticVariation disease BEFREE It overlaps with Desbuquois dysplasia, Larsen syndrome and spondyloepiphyseal dysplasia with dislocations ascribed to CANT1, FLNB and CHST3 mutations, respectively. 24755949 2015
Entrez Id: 8838
Gene Symbol: CCN6
CCN6
0.210 GeneticVariation disease BEFREE Progressive pseudorheumatoid dysplasia (PPRD) is a rare, autosomal-recessive condition characterized by mild spondyloepiphyseal dysplasia (SED) and severe, progressive, early-onset arthritis due to WISP3 mutations. 26183434 2015
Entrez Id: 8838
Gene Symbol: CCN6
CCN6
0.210 Biomarker disease MGD WISP3, the gene responsible for the human skeletal disease progressive pseudorheumatoid dysplasia, is not essential for skeletal function in mice. 15601861 2005
Entrez Id: 8838
Gene Symbol: CCN6
CCN6
0.210 Biomarker disease MGD A Wisp3 Cre-knockin allele produces efficient recombination in spermatocytes during early prophase of meiosis I. 24040393 2013
Entrez Id: 952
Gene Symbol: CD38
CD38
0.010 Biomarker disease BEFREE Radiographs demonstrated a distinct spondyloepiphyseal dysplasia in which the most striking changes were confined to the thoracic spine (flattening and collapse in T7, T8 and T10 vertebral bodies) and to the femoral capital epiphyses (irregularities and fragmentation). 1456283 1992
Entrez Id: 9469
Gene Symbol: CHST3
CHST3
0.120 GeneticVariation disease BEFREE A novel CHST3 allele associated with spondyloepiphyseal dysplasia and hearing loss in Pakistani kindred. 26572954 2016
Entrez Id: 9469
Gene Symbol: CHST3
CHST3
0.120 CausalMutation disease CLINVAR
Entrez Id: 9469
Gene Symbol: CHST3
CHST3
0.120 GeneticVariation disease BEFREE Mutations in CHST3 have been previously reported to be associated with a rare phenotype of skeleton dysplasia, known as Spondyloepiphyseal dysplasia. 30200136 2018
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
1.000 GeneticVariation disease UNIPROT PSACH results from mutations in the cartilage oligomeric matrix protein (COMP) gene, while SEDC is caused by mutations in the gene for type II procollagen (COL2A1). 11746045 2001
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
1.000 GeneticVariation disease BEFREE Kniest dysplasia is caused by dominant collagen II (COL2A1) mutations: parental somatic mosaicism manifesting as Stickler phenotype and mild spondyloepiphyseal dysplasia. 7700721 1994
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
1.000 GeneticVariation disease BEFREE Identification of three novel mutations in the COL2A1 gene in four unrelated Chinese families with spondyloepiphyseal dysplasia congenita. 21924244 2011
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
1.000 GeneticVariation disease BEFREE Phenotype of the twin girls resembles spondyloepiphyseal dysplasia congenita Spranger-Wiedemann (SEDC-SW), but shortening of the stature is more severe and the cranioface is normal. 16088915 2005
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
1.000 Biomarker disease BEFREE Our study extends the mutation spectrum of SEDC and confirms genotype-phenotype relationship between mutations at glycine in the triple helix of the alpha-1(II) chains of the COL2A1 and clinical findings of SEDC, which may be helpful in the genetic counseling of patients with SEDC. 26030151 2015
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
1.000 GeneticVariation disease BEFREE This case further documents the molecular basis of the spondyloepiphyseal dysplasia spectrum of chondrodysplasias as mutations in COL2A1. 1429602 1992
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
1.000 GeneticVariation disease BEFREE Although type II collagen defects have been found in some families with SED congenita, the phenotype in our family showed discordant segregation with COL2A1 gene associated restriction fragment length polymorphisms (RFLPs), the markers for the structural locus of type II collagen. 1978986 1990
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
1.000 CausalMutation disease CLINVAR Use of Targeted Exome Sequencing for Molecular Diagnosis of Skeletal Disorders. 26380986 2015
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
1.000 Biomarker disease GENOMICS_ENGLAND Pseudoachondroplasia and multiple epiphyseal dysplasia: a 7-year comprehensive analysis of the known disease genes identify novel and recurrent mutations and provides an accurate assessment of their relative contribution. 21922596 2012
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
1.000 GeneticVariation disease BEFREE Association of a p.Pro786Leu variant in COL2A1 with mild spondyloepiphyseal dysplasia congenita in a three-generation family. 21204228 2011
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
1.000 GeneticVariation disease BEFREE c.2224G>A (p.Gly687Ser) is a novel mutation of COL2A1 associated with spondyloepiphyseal dysplasia congenital. 25967556 2015
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
1.000 GeneticVariation disease BEFREE An RNA-splicing mutation (G+5IVS20) in the type II collagen gene (COL2A1) in a family with spondyloepiphyseal dysplasia congenita. 7847372 1995
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
1.000 GeneticVariation disease BEFREE Most COL2A1 mutations occur in the triple helical region of alpha 1(II) chains: the SED spectrum is mostly attributed to missense mutations that substitute bulky amino acids for glycine residues, STD-I to haploinsufficiency of truncation mutations, and KND to exon skipping due to splice-site mutations. 15895462 2005
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
1.000 GeneticVariation disease UNIPROT Identification of the molecular defect in a family with spondyloepiphyseal dysplasia. 2543071 1989
Entrez Id: 1280
Gene Symbol: COL2A1
COL2A1
1.000 GeneticVariation disease BEFREE Alternative splicing of exon 12 of the COL2A1 gene interrupts the triple helix of type-II collagen in the Kniest form of spondyloepiphyseal dysplasia. 8893763 1996