Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 124583
Gene Symbol: CANT1
CANT1
0.010 GeneticVariation disease BEFREE It overlaps with Desbuquois dysplasia, Larsen syndrome and spondyloepiphyseal dysplasia with dislocations ascribed to CANT1, FLNB and CHST3 mutations, respectively. 24755949 2015
Entrez Id: 59341
Gene Symbol: TRPV4
TRPV4
0.010 GeneticVariation disease BEFREE TRPV4 mutation was first identified in brachyolmia, and then in a spectrum of autosomal-dominant skeletal dysplasias, which includes Kozlowski type of spondylometaphyseal dysplasia, metatropic dysplasia, Maroteaux type of spondyloepiphyseal dysplasia and parastremmatic dysplasia. 20505684 2010
Entrez Id: 50485
Gene Symbol: SMARCAL1
SMARCAL1
0.010 GeneticVariation disease BEFREE We conclude therefore that SED is a feature of patients with SMARCAL1 mutations and that skeletal features do not distinguish who of those with SED have SMARCAL1 mutations. 20013129 2010
Entrez Id: 6822
Gene Symbol: SULT2A1
SULT2A1
0.010 GeneticVariation disease BEFREE Most COL2A1 mutations occur in the triple helical region of alpha 1(II) chains: the SED spectrum is mostly attributed to missense mutations that substitute bulky amino acids for glycine residues, STD-I to haploinsufficiency of truncation mutations, and KND to exon skipping due to splice-site mutations. 15895462 2005
Entrez Id: 7535
Gene Symbol: ZAP70
ZAP70
0.010 GeneticVariation disease BEFREE Most COL2A1 mutations occur in the triple helical region of alpha 1(II) chains: the SED spectrum is mostly attributed to missense mutations that substitute bulky amino acids for glycine residues, STD-I to haploinsufficiency of truncation mutations, and KND to exon skipping due to splice-site mutations. 15895462 2005
Entrez Id: 1311
Gene Symbol: COMP
COMP
0.010 GeneticVariation disease BEFREE PSACH results from mutations in the cartilage oligomeric matrix protein (COMP) gene, while SEDC is caused by mutations in the gene for type II procollagen (COL2A1). 11746045 2001
Entrez Id: 952
Gene Symbol: CD38
CD38
0.010 Biomarker disease BEFREE Radiographs demonstrated a distinct spondyloepiphyseal dysplasia in which the most striking changes were confined to the thoracic spine (flattening and collapse in T7, T8 and T10 vertebral bodies) and to the femoral capital epiphyses (irregularities and fragmentation). 1456283 1992
Entrez Id: 2720
Gene Symbol: GLB1
GLB1
0.010 GeneticVariation disease BEFREE Morquio-B disease, spondyloepiphyseal dysplasia associated with acid beta-galactosidase deficiency. Report of three cases in one family. 6409799 1983
Entrez Id: 176
Gene Symbol: ACAN
ACAN
0.020 GeneticVariation disease BEFREE A mutation in the variable repeat region of the aggrecan gene (AGC1) causes a form of spondyloepiphyseal dysplasia associated with severe, premature osteoarthritis. 16080123 2005
Entrez Id: 176
Gene Symbol: ACAN
ACAN
0.020 Biomarker disease BEFREE This proximal location for AGC1 is further supported by linkage data from a second family with an autosomal recessive form of multiple epiphyseal dysplasia that also maps to the SED locus. 12205105 2002
Entrez Id: 6399
Gene Symbol: TRAPPC2
TRAPPC2
0.100 CausalMutation disease CLINVAR
Entrez Id: 9469
Gene Symbol: CHST3
CHST3
0.120 GeneticVariation disease BEFREE Mutations in CHST3 have been previously reported to be associated with a rare phenotype of skeleton dysplasia, known as Spondyloepiphyseal dysplasia. 30200136 2018
Entrez Id: 9469
Gene Symbol: CHST3
CHST3
0.120 GeneticVariation disease BEFREE A novel CHST3 allele associated with spondyloepiphyseal dysplasia and hearing loss in Pakistani kindred. 26572954 2016
Entrez Id: 9469
Gene Symbol: CHST3
CHST3
0.120 CausalMutation disease CLINVAR
Entrez Id: 3339
Gene Symbol: HSPG2
HSPG2
0.200 Biomarker disease MGD Development of the coronary arteries in a murine model of transposition of great arteries. 12818570 2003
Entrez Id: 3339
Gene Symbol: HSPG2
HSPG2
0.200 Biomarker disease MGD Role of collagen type II and perlecan in skeletal development. 12814946 2003
Entrez Id: 1404
Gene Symbol: HAPLN1
HAPLN1
0.200 Biomarker disease MGD Genetic rescue of chondrodysplasia and the perinatal lethal effect of cartilage link protein deficiency. 12732630 2003
Entrez Id: 3339
Gene Symbol: HSPG2
HSPG2
0.200 Biomarker disease MGD Hyperplastic conotruncal endocardial cushions and transposition of great arteries in perlecan-null mice. 12142349 2002
Entrez Id: 3339
Gene Symbol: HSPG2
HSPG2
0.200 Biomarker disease MGD Absence of acetylcholinesterase at the neuromuscular junctions of perlecan-null mice. 11802174 2002
Entrez Id: 3339
Gene Symbol: HSPG2
HSPG2
0.200 Biomarker disease MGD Perlecan is essential for cartilage and cephalic development. 10545953 1999
Entrez Id: 1404
Gene Symbol: HAPLN1
HAPLN1
0.200 Biomarker disease MGD Mice lacking link protein develop dwarfism and craniofacial abnormalities. 9988279 1999
Entrez Id: 3339
Gene Symbol: HSPG2
HSPG2
0.200 Biomarker disease MGD Perlecan maintains the integrity of cartilage and some basement membranes. 10579729 1999
Entrez Id: 8838
Gene Symbol: CCN6
CCN6
0.210 GeneticVariation disease BEFREE Progressive pseudorheumatoid dysplasia (PPRD) is a rare, autosomal-recessive condition characterized by mild spondyloepiphyseal dysplasia (SED) and severe, progressive, early-onset arthritis due to WISP3 mutations. 26183434 2015
Entrez Id: 8838
Gene Symbol: CCN6
CCN6
0.210 Biomarker disease MGD A Wisp3 Cre-knockin allele produces efficient recombination in spermatocytes during early prophase of meiosis I. 24040393 2013
Entrez Id: 8838
Gene Symbol: CCN6
CCN6
0.210 Biomarker disease MGD WISP3, the gene responsible for the human skeletal disease progressive pseudorheumatoid dysplasia, is not essential for skeletal function in mice. 15601861 2005