Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 10743
Gene Symbol: RAI1
RAI1
0.780 GeneticVariation disease BEFREE TCF20 encodes a transcriptional co-regulator structurally related to RAI1, the dosage-sensitive gene responsible for Smith-Magenis syndrome (deletion/haploinsufficiency) and Potocki-Lupski syndrome (duplication/triplosensitivity). 30819258 2019
Entrez Id: 10743
Gene Symbol: RAI1
RAI1
0.780 Biomarker disease BEFREE RAI1 (retinoic acid induced-1) is a dosage-sensitive gene that causes Smith-Magenis syndrome (SMS) when mutated or deleted and Potocki-Lupski Syndrome (PTLS) when duplicated, with psychiatric features commonly observed in both syndromes. 26743651 2016
Entrez Id: 10743
Gene Symbol: RAI1
RAI1
0.780 GeneticVariation disease BEFREE The key dosage-sensitive genes RAI1 and PMP22 are respectively associated with PTLS and CMT1A. 26544804 2015
Entrez Id: 10743
Gene Symbol: RAI1
RAI1
0.780 GeneticVariation disease BEFREE Clinical and cytogenetic features of a Potocki-Lupski syndrome with the shortest 0.25Mb microduplication in 17p11.2 including RAI1. 23078968 2013
Entrez Id: 10743
Gene Symbol: RAI1
RAI1
0.780 Biomarker disease BEFREE To investigate the contribution of individual genes to the circadian phenotypes observed in SMS, we now report the analysis of free-running period lengths in Rai1(+/-) and Df(11)17-2/+ mice, as well as in mice deficient for another known circadian gene mapping within the commonly deleted/duplicated region, Dexras1, and we compare these results to those previously observed in Dp(11)17/+ mice. 23703963 2013
Entrez Id: 10743
Gene Symbol: RAI1
RAI1
0.780 GeneticVariation disease BEFREE Further, studies on knockout/transgenic mice showed that the metabolic consequences of Dp(11)17 and Df(11)17 CNVs are not only due to dosage alterations of Rai1, the predominant dosage-sensitive gene for SMS and likely also PTLS. 22654670 2012
Entrez Id: 10743
Gene Symbol: RAI1
RAI1
0.780 GeneticVariation disease BEFREE Potocki-Lupski syndrome (PTLS) is a recently described microduplication syndrome associated with duplication 17p11.2, including the RAI1 gene. 21271655 2011
Entrez Id: 10743
Gene Symbol: RAI1
RAI1
0.780 Biomarker disease BEFREE The smallest region of overlap (SRO) for all of the 74 PTLS duplications examined is narrowed to a 125 kb interval containing only RAI1, a gene recently further implicated in autism. 20188345 2010
Entrez Id: 10743
Gene Symbol: RAI1
RAI1
0.780 ChromosomalRearrangement disease ORPHANET The smallest region of overlap (SRO) for all of the 74 PTLS duplications examined is narrowed to a 125 kb interval containing only RAI1, a gene recently further implicated in autism. 20188345 2010
Entrez Id: 10743
Gene Symbol: RAI1
RAI1
0.780 Biomarker disease CTD_human Rai1 deficiency in mice causes learning impairment and motor dysfunction, whereas Rai1 heterozygous mice display minimal behavioral phenotypes. 17517686 2007
Entrez Id: 10743
Gene Symbol: RAI1
RAI1
0.780 Biomarker disease MGD
Entrez Id: 201163
Gene Symbol: FLCN
FLCN
0.410 Biomarker disease BEFREE Comparison of the duplicated segment in patients with Potocki-Lupski syndrome and the renal phenotype and the syntenic duplicated region in the mouse model allowed us to suggest a 0.285 Mb critical region, including the FLCN gene that may be important for development of renal abnormalities in patients with this duplication. 22639462 2012
Entrez Id: 201163
Gene Symbol: FLCN
FLCN
0.410 GeneticVariation disease CLINVAR
Entrez Id: 201163
Gene Symbol: FLCN
FLCN
0.410 CausalMutation disease CLINVAR
Entrez Id: 201163
Gene Symbol: FLCN
FLCN
0.410 Biomarker disease CTD_human
Entrez Id: 23164
Gene Symbol: MPRIP
MPRIP
0.100 CausalMutation disease CLINVAR
Entrez Id: 100038247
Gene Symbol: PTLS
PTLS
0.060 GeneticVariation disease BEFREE Potocki-Lupski syndrome (PTLS; MIM 610883) is a neurodevelopmental disorder caused by a microduplication, a 3.7 Mb copy number variant, mapping within chromosome 17p11.2, encompassing the dosage-sensitive RAI1 gene. 31342617 2019
Entrez Id: 100038247
Gene Symbol: PTLS
PTLS
0.060 GeneticVariation disease BEFREE Potocki-Lupski syndrome (PTLS, OMIM: 610883) is a microduplication syndrome characterized by infantile hypotonia, failure to thrive, cardiovascular malformations, developmental delay, intellectual disability, and behavior abnormalities, the latter of which can include autism spectrum disorder. 24311450 2014
Entrez Id: 100038247
Gene Symbol: PTLS
PTLS
0.060 Biomarker disease BEFREE We previously used chromosome-engineering and gene targeting to generate mouse models for PTLS (Dp(11)17/+), and SMS due to either deletion CNV or gene knock-out (Df(11)17-2/+ and Rai1(+/-) , respectively) and we observed phenotypes in these mouse models consistent with their associated human syndromes. 23703963 2013
Entrez Id: 100038247
Gene Symbol: PTLS
PTLS
0.060 GeneticVariation disease BEFREE Potocki-Lupski syndrome (PTLS [MIM 610883]) is a recently recognized microduplication syndrome associated with 17p11.2. 23078968 2013
Entrez Id: 100038247
Gene Symbol: PTLS
PTLS
0.060 GeneticVariation disease BEFREE Potocki-Lupski syndrome (PTLS; OMIM 610883) is a genomic syndrome that arises as a result of a duplication of 17p11.2. 22178197 2012
Entrez Id: 100038247
Gene Symbol: PTLS
PTLS
0.060 Biomarker disease BEFREE We previously chromosomally engineered a mouse model for PTLS (Dp(11)17/+) with a duplication of a 2-Mb genomic interval syntenic to the PTLS region and identified consistent behavioral abnormalities in this mouse model. 22492990 2012
Entrez Id: 6942
Gene Symbol: TCF20
TCF20
0.010 GeneticVariation disease BEFREE TCF20 encodes a transcriptional co-regulator structurally related to RAI1, the dosage-sensitive gene responsible for Smith-Magenis syndrome (deletion/haploinsufficiency) and Potocki-Lupski syndrome (duplication/triplosensitivity). 30819258 2019
Entrez Id: 5376
Gene Symbol: PMP22
PMP22
0.010 GeneticVariation disease BEFREE The key dosage-sensitive genes RAI1 and PMP22 are respectively associated with PTLS and CMT1A. 26544804 2015
Entrez Id: 51655
Gene Symbol: RASD1
RASD1
0.010 Biomarker disease BEFREE To investigate the contribution of individual genes to the circadian phenotypes observed in SMS, we now report the analysis of free-running period lengths in Rai1(+/-) and Df(11)17-2/+ mice, as well as in mice deficient for another known circadian gene mapping within the commonly deleted/duplicated region, Dexras1, and we compare these results to those previously observed in Dp(11)17/+ mice. 23703963 2013