Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4093
Gene Symbol: SMAD9
SMAD9
0.300 Biomarker disease GENOMICS_ENGLAND Exome Sequencing Reveals Germline SMAD9 Mutation That Reduces Phosphatase and Tensin Homolog Expression and Is Associated With Hamartomatous Polyposis and Gastrointestinal Ganglioneuromas. 26122142 2015
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 GeneticVariation disease BEFREE Peutz-Jeghers syndrome (PJS) caused by germline STK11 variants is a rare autosomal dominant cancer predisposition syndrome characterized by multiple gastrointestinal (GI) hamartomatous polyps, mucocutaneous pigmentation and a high inherited risk of developing GI, breast and other cancers. 30689838 2019
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 GeneticVariation disease BEFREE Peutz-Jeghers syndrome (PJS) is a rare hereditary disorder resulting from mutations in serine/threonine kinase 11 (STK11) and characterized by gastrointestinal (GI) hamartomatous polyps, mucocutaneous pigmentation, and an increased risk for specific cancers. 24652667 2014
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 GeneticVariation disease BEFREE Peutz-Jeghers syndrome (PJS), caused by germ-line mutations in LKB1, is characterized by the development of hamartomatous polyps in the gastrointestinal (GI) tract. 23337932 2013
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 GeneticVariation disease BEFREE We sought to determine the prevalence of hamartomatous polyposis-associated mutations in the susceptibility genes PTEN, BMPR1A, SMAD4, ENG, and STK11 in individuals with ≥5 gastrointestinal polyps, including at least 1 hamartomatous or hyperplastic/serrated polyp. 23399955 2013
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 Biomarker disease BEFREE LKB1 encodes a serine/threonine protein kinase that is defective in patients with Peutz-Jeghers syndrome (PJS), a hereditary disorder characterized by gastrointestinal hamartomatous polyposis and an increased risk of cancer development. 18600394 2008
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 GeneticVariation disease BEFREE Mutations in the LKB1 gene are responsible for the Peutz-Jeghers Syndrome (PJS) characterized by a predisposition to hamartomatous polyps and hyperpigmentation of the buccal mucosa. 17921699 2007
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 GeneticVariation disease BEFREE Peutz-Jeghers syndrome (PJS) is an autosomal dominant disease caused by germline mutation of the serine threonine kinase 11 and characterized by hamartomatous polyps in the gastrointestinal tract and mucocutaneous melanin pigmentation. 16616343 2006
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 GeneticVariation disease BEFREE Germline mutations in the LKB1 gene are known to cause Peutz-Jeghers syndrome, which is an autosomal dominant disorder characterised by hamartomatous polyposis and mucocutaneous pigmentation. 16407375 2006
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 Biomarker disease BEFREE As PTEN is a dual phosphatase mutated in autosomal inherited disorders with phenotypes similar to those of PJS (Bannayan-Riley-Ruvalcaba syndrome and Cowden disease), our study suggests a functional link between the proteins involved in different hamartomatous polyposis syndromes and emphasizes the central role played by LKB1 as a tumor suppressor in the small intestine. 15987703 2005
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 GeneticVariation disease BEFREE Germline mutations in the STK11 gene have been identified in 10-70% of patients with Peutz-Jeghers syndrome (PJS), an autosomal-dominant hamartomatous polyposis syndrome. 16287113 2005
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 Biomarker disease BEFREE Germ-line mutations in the serine-threonine kinase gene STK11 (LKB1) cause Peutz-Jeghers syndrome (PJS), a rare autosomal dominantly inherited disease, characterized by hamartomatous polyposis and mucocutaneous pigmentation. 15287029 2004
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 Biomarker disease BEFREE Correlation of staining for LKB1 and COX-2 in hamartomatous polyps and carcinomas from patients with Peutz-Jeghers syndrome. 14623934 2003
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 GeneticVariation disease BEFREE Germline mutations of LKB1/Peutz-Jeghers syndrome gene predispose carriers to hamartomatous polyposis of the gastrointestinal tract as well as to cancer of different organ systems. 10079245 1999
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 GeneticVariation disease BEFREE Four hamartomatous polyps (three from JP and one from PJS) showed seven, new mutations and one common APC variant (codon 486), whereas no hyperplastic polyps demonstrated mutation. 10502830 1999
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 GeneticVariation disease BEFREE Despite the hamartomatous polyps and increased cancer risk associated with this syndrome, somatic alterations in LKB1/STK11 have not been identified in human tumours. 10208439 1999
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 GeneticVariation disease BEFREE Germline mutations in LKB1 have been reported to underlie familial Peutz-Jeghers syndrome (PJS) with intestinal hamartomatous polyps and an elevated risk of various neoplasms. 9887330 1999
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 GeneticVariation disease BEFREE In DNA isolated from microdissected hamartomatous polyps of the index patient, exon 1 of the STK11 gene could not be amplified suggesting that both alleles of STK11 exon 1 were lost in the hamartomatous polyps. 9934767 1999
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 CausalMutation disease CLINVAR
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 Biomarker disease HPO
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.140 Biomarker disease BEFREE Exome Sequencing Reveals Germline SMAD9 Mutation That Reduces Phosphatase and Tensin Homolog Expression and Is Associated With Hamartomatous Polyposis and Gastrointestinal Ganglioneuromas. 26122142 2015
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.140 GeneticVariation disease BEFREE We sought to determine the prevalence of hamartomatous polyposis-associated mutations in the susceptibility genes PTEN, BMPR1A, SMAD4, ENG, and STK11 in individuals with ≥5 gastrointestinal polyps, including at least 1 hamartomatous or hyperplastic/serrated polyp. 23399955 2013
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.140 GeneticVariation disease BEFREE The authors examined whether familial hamartomatous polyps harbor defects in DNA mismatch repair (MMR), and assayed for somatic mutation of PTEN, a gene inactivated in the germline of some hamartomatous polyposis syndrome patients. 20845481 2011
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.140 Biomarker disease BEFREE As PTEN is a dual phosphatase mutated in autosomal inherited disorders with phenotypes similar to those of PJS (Bannayan-Riley-Ruvalcaba syndrome and Cowden disease), our study suggests a functional link between the proteins involved in different hamartomatous polyposis syndromes and emphasizes the central role played by LKB1 as a tumor suppressor in the small intestine. 15987703 2005
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.140 CausalMutation disease CLINVAR