Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4609
Gene Symbol: MYC
MYC
0.010 AlteredExpression group BEFREE Western blotting and RT-qPCR confirmed the decrease in MYC and increase in p53 expression in ARMs. 31787253 2020
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.010 AlteredExpression group BEFREE Western blotting and RT-qPCR confirmed the decrease in MYC and increase in p53 expression in ARMs. 31787253 2020
Entrez Id: 8318
Gene Symbol: CDC45
CDC45
0.010 GeneticVariation group BEFREE Patients with MGS caused by mutations in CDC45 display a distinct phenotype characterized by craniosynostosis and anorectal malformation. 30986546 2020
Entrez Id: 2735
Gene Symbol: GLI1
GLI1
0.010 Biomarker group BEFREE This study demonstrated that the expression of Shh, Ptch1, and Gli1 in lumbosacral spinal cord was remarkably reduced during late developmental stages in fetal rats with ARMs. 30502245 2019
Entrez Id: 5727
Gene Symbol: PTCH1
PTCH1
0.010 AlteredExpression group BEFREE This study demonstrated that the expression of Shh, Ptch1, and Gli1 in lumbosacral spinal cord was remarkably reduced during late developmental stages in fetal rats with ARMs. 30502245 2019
Entrez Id: 442909
Gene Symbol: MIR342
MIR342
0.010 AlteredExpression group BEFREE The quantitative reverse transcription polymerase chain reaction (qRT-PCR) results showed that the expression of miR-342-5p was significantly increased in ARM anorectal tissues compared with normal tissues on GD19 and GD21, and the expression of Wnt3a demonstrated the opposite on GD21. 31074015 2019
Entrez Id: 23352
Gene Symbol: UBR4
UBR4
0.010 AlteredExpression group BEFREE Thirty-seven patients with non-syndromic HSCR and eighteen controls were involved in this study. qPCR revealed that the UBR4 expression was strongly decreased (0.77-fold) in the ganglionic group of patients with HSCR compared to the control group with ARM (ΔC<sub>T</sub> 2.43 ± 0.36 vs. 2.05 ± 0.69; p = 0.009), whereas the UBR4 expression was also significantly reduced (0.79-fold) in the aganglionic group of patients with HSCR compared to the control group with ARM (ΔC<sub>T</sub> 2.39 ± 0.46 vs. 2.05 ± 0.69; p = 0.044). 31830949 2019
Entrez Id: 5029
Gene Symbol: P2RY2
P2RY2
0.010 AlteredExpression group BEFREE Downregulation of P2Y2 and HuD during the development of the enteric nervous system in fetal rats with anorectal malformations. 31173231 2019
Entrez Id: 5156
Gene Symbol: PDGFRA
PDGFRA
0.010 Biomarker group BEFREE In conclusion, Pdgfra is required for the development and survival of the urorectal mesenchyme in embryo, dysregulated Pdgfra signaling induced urorectal defects in mice resembling human congenital diseases of anorectal malformations and hypospadias. 30323271 2019
Entrez Id: 6176
Gene Symbol: RPLP1
RPLP1
0.010 AlteredExpression group BEFREE We selected 15 commonly used reference genes (Rps18, Actb, B2m, Gapdh, Ppia, Hprt1, Pgk1, Ywhaz, Tbp, Ubc, Rps16, Rpl13a, Rplp1, Sdha, and Hmbs) as candidate reference genes and detected their mRNA expression in ARM samples by RT-qPCR. 31065464 2019
Entrez Id: 2254
Gene Symbol: FGF9
FGF9
0.010 AlteredExpression group BEFREE The results of Western blots and qRT-PCR were consistent, with significantly increased Fgf9 expression in the hindgut and rectum of normal embryos than in embryos with ARM from E13 to E15. 31379938 2019
Entrez Id: 9496
Gene Symbol: TBX4
TBX4
0.010 AlteredExpression group BEFREE Spatio-temporal expression of TBX4 was evaluated in normal (n = 490) and ETU-induced ARM rat embryos (n = 455) from E13 to E16 by immunohistochemical staining, Western blot analysis and real-time RT-PCR. 31054579 2019
Entrez Id: 23521
Gene Symbol: RPL13A
RPL13A
0.010 Biomarker group BEFREE The most stable reference genes for RT-qPCR were Rpl13a, Ywhaz, and Rps18 in ETU-induced ARMs in rat fetus. 31065464 2019
Entrez Id: 6222
Gene Symbol: RPS18
RPS18
0.010 Biomarker group BEFREE The most stable reference genes for RT-qPCR were Rpl13a, Ywhaz, and Rps18 in ETU-induced ARMs in rat fetus. 31065464 2019
Entrez Id: 4488
Gene Symbol: MSX2
MSX2
0.010 AlteredExpression group BEFREE Immunohistochemical staining of ARM embryos revealed that MSX2 was mainly expressed in the epithelium of the hindgut and urorectal septum (URS) on GD14. 30268882 2018
Entrez Id: 4086
Gene Symbol: SMAD1
SMAD1
0.010 PosttranslationalModification group BEFREE Our results reveal that BMP4 expression in the lumbosacral spinal cord of ARMs rat embryos is decreased at both the mRNA and protein levels and could decrease the phosphorylation of smad1/5, when compared with their expression levels in normal tissue. 29959980 2018
Entrez Id: 2026
Gene Symbol: ENO2
ENO2
0.010 AlteredExpression group BEFREE Western blotting showed the expression levels of NSE, S-100, and C-kit were lower in the ARM group than that in the control group (P < .01).Histopathologic and IHC findings suggest that the distal rectal pouch has distinct defects in the neuromusculature. 30075558 2018
Entrez Id: 27022
Gene Symbol: FOXD3
FOXD3
0.010 Biomarker group BEFREE In the present study, we used ethylene thiourea to induce the animal models of anorectal malformation in rat embryos and to interrogate the role of FOXD3/FOXD4 in anorectal malformation pathogenesis. 29307282 2018
Entrez Id: 406912
Gene Symbol: MIR125B2
MIR125B2
0.010 AlteredExpression group BEFREE In conclusion, the results suggested that the differential expression of miR‑125b‑2‑3p, miR‑92a‑2‑5p and miR‑99a‑5p during key time-points of anorectal formation in rats may have functions in the pathogenesis of ARM. 30106085 2018
Entrez Id: 64641
Gene Symbol: EBF2
EBF2
0.010 GeneticVariation group BEFREE These results support that missense mutation in the EBF2 c.215C > T (p.Ala72Val) is very likely to contribute to the pathogenesis of ARM in this family. 29704291 2018
Entrez Id: 407055
Gene Symbol: MIR99A
MIR99A
0.010 Biomarker group BEFREE In conclusion, the results suggested that the differential expression of miR‑125b‑2‑3p, miR‑92a‑2‑5p and miR‑99a‑5p during key time-points of anorectal formation in rats may have functions in the pathogenesis of ARM. 30106085 2018
Entrez Id: 6271
Gene Symbol: S100A1
S100A1
0.010 AlteredExpression group BEFREE Western blotting showed the expression levels of NSE, S-100, and C-kit were lower in the ARM group than that in the control group (P < .01).Histopathologic and IHC findings suggest that the distal rectal pouch has distinct defects in the neuromusculature. 30075558 2018
Entrez Id: 80210
Gene Symbol: ARMC9
ARMC9
0.010 Biomarker group BEFREE One hundred sixty-six patients (Cloaca n = 16, Hirschsprung disease [HD] n = 71, anorectal malformation [ARM] n = 79) were identified. 29936975 2018
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.010 Biomarker group BEFREE Mature ganglionic cells were reduced and muscularis propria showed reduced and patchy positivity for NSE, S-100, and C-kit protein in ARM group compared to that in control group according to IHC. 30075558 2018
Entrez Id: 10327
Gene Symbol: AKR1A1
AKR1A1
0.010 Biomarker group BEFREE One hundred sixty-six patients (Cloaca n = 16, Hirschsprung disease [HD] n = 71, anorectal malformation [ARM] n = 79) were identified. 29936975 2018